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[Maximilian bloch <maximilian.bloch@xxxxxxxxx>]

OK, I managed to figure it out, notifications were being sent by a
Thunderbird addon 'Gnome Integration'. Dissabling/configuring this addon
solved the issue.

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https://bugs.launchpad.net/bugs/1510907

Title:
  Thunderbird Gnome Notification Deactivation Ignored, Wily 15.10

Status in thunderbird package in Ubuntu:
  New

Bug description:
  I am trying to disable Thunderbird notifications in Gnome Shell
  without success.

  Ubuntu 15.10 Wily Werewolf
  Gnome Shell 3.16
  Thunderbird 38.3.0

  I have disabled Thunderbird notifications in the gnome Shell notifications settings (see attached screenshot).
  I have disabled Thunderbird notifications directly in Thunderbird (see attached screenshot).
  I am still seeing notification banners popping up.
  With notifications enabled, I do not get duplicates.
  Changing notification settings seems to have no effect

  Sorry if this is not a Thunderbird issue. I was not able to figure out
  which package is being used for displaying notifications in Gnome
  Shell and I was not able to find a log of Gnome Shell notifications
  for further inspection.

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