dhis2-devs team mailing list archive

Thread
Date
[Bug 633156] Re: Gap analysis throws SQL syntax error exception

To: dhis2-devs@xxxxxxxxxxxxxxxxxxx
From: Lars Helge Øverland <larshelge@xxxxxxxxx>
Date: Wed, 29 Dec 2010 17:18:07 -0000
Reply-to: Bug 633156 <633156@xxxxxxxxxxxxxxxxxx>
Sender: bounces@xxxxxxxxxxxxx
** Changed in: dhis2
       Status: Fix Released => Fix Committed

-- 
You received this bug notification because you are a member of DHIS 2
developers, which is subscribed to DHIS.
https://bugs.launchpad.net/bugs/633156

Title:
  Gap analysis throws SQL syntax error exception

Status in DHIS 2 - District Health Information Software:
  Fix Committed

Bug description:
  When running Gap Analysis (in Data Quality) I got a SQL syntax error exception (H2 database). See About DHIS2 info and stacktrace below.

Current user:
    admin
Version:
    2.0.6-SNAPSHOT
Build revision:
    2080 
Build date:
    2010-09-08 08:19
User agent:
    Mozilla/5.0 (Windows; U; Windows NT 6.1; en-GB; rv:1.9.2.8) Gecko/20100722 Firefox/3.6.8
External configuration directory:
    D:\tools\dhis2-live\conf
Environment variable:
    DHIS2_HOME
Database type:
    H2
Database name:
    dhis2_demo;AUTO_SERVER=TRUE
Database user:
    sa
Java Opts:
    -Xms512m -Xmx1024m -XX:PermSize=256m -XX:MaxPermSize=768m
Java version:
    1.6.0_21
Java vendor:
    Sun Microsystems Inc.
OS name:
    Windows 7
OS architecture:
    amd64
OS version:
    6.1


Exception:

* ERROR 14:56:10,188 Error while executing action (ExceptionInterceptor.java [1177016955@qtp-2138081422-21])
java.lang.RuntimeException: Failed to get deflated data values
	at org.hisp.dhis.dataanalysis.jdbc.JdbcDataAnalysisStore.getDeflatedDataValueGaps(JdbcDataAnalysisStore.java:179)
	at org.hisp.dhis.dataanalysis.GapAnalysisService.analyse(GapAnalysisService.java:85)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
	at java.lang.reflect.Method.invoke(Unknown Source)
	at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:309)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
	at org.springframework.aop.aspectj.MethodInvocationProceedingJoinPoint.proceed(MethodInvocationProceedingJoinPoint.java:80)
	at org.hisp.dhis.jdbc.StatementInterceptor.intercept(StatementInterceptor.java:65)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
	at java.lang.reflect.Method.invoke(Unknown Source)
	at org.springframework.aop.aspectj.AbstractAspectJAdvice.invokeAdviceMethodWithGivenArgs(AbstractAspectJAdvice.java:621)
	at org.springframework.aop.aspectj.AbstractAspectJAdvice.invokeAdviceMethod(AbstractAspectJAdvice.java:610)
	at org.springframework.aop.aspectj.AspectJAroundAdvice.invoke(AspectJAroundAdvice.java:65)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at org.springframework.aop.interceptor.ExposeInvocationInterceptor.invoke(ExposeInvocationInterceptor.java:89)
	at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
	at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202)
	at $Proxy51.analyse(Unknown Source)
	at org.hisp.dhis.validationrule.action.dataanalysis.GetAnalysisAction.execute(GetAnalysisAction.java:191)
	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
	at sun.reflect.NativeMethodAccessorImpl.invoke(Unknown Source)
	at sun.reflect.DelegatingMethodAccessorImpl.invoke(Unknown Source)
	at java.lang.reflect.Method.invoke(Unknown Source)
	at com.opensymphony.xwork2.DefaultActionInvocation.invokeAction(DefaultActionInvocation.java:441)
	at com.opensymphony.xwork2.DefaultActionInvocation.invokeActionOnly(DefaultActionInvocation.java:280)
	at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:243)
	at org.hisp.dhis.webportal.interceptor.XWorkPortalUserInterceptor.intercept(XWorkPortalUserInterceptor.java:82)
	at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:237)
	at org.hisp.dhis.webportal.interceptor.XWorkPortalModuleInterceptor.intercept(XWorkPortalModuleInterceptor.java:85)
	at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:237)
	at org.hisp.dhis.webportal.interceptor.XWorkPortalMenuInterceptor.intercept(XWorkPortalMenuInterceptor.java:91)
	at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:237)
	at org.hisp.dhis.webportal.interceptor.XWorkPortalParamsInterceptor.intercept(XWorkPortalParamsInterceptor.java:117)
	at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:237)
	at org.hisp.dhis.interceptor.ContextInterceptor.intercept(ContextInterceptor.java:67)
	at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:237)
	at org.hisp.dhis.interceptor.StyleInterceptor.intercept(StyleInterceptor.java:89)
	at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:237)
	at org.hisp.dhis.interceptor.SystemSettingInterceptor.intercept(SystemSettingInterceptor.java:103)
	at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:237)
	at org.hisp.dhis.interceptor.DataDictionaryModeInterceptor.intercept(DataDictionaryModeInterceptor.java:109)
	at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:237)
	at org.hisp.dhis.interceptor.DisplayPropertyInterceptor.intercept(DisplayPropertyInterceptor.java:90)
	at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:237)
	at org.hisp.dhis.interceptor.SortOrderInterceptor.intercept(SortOrderInterceptor.java:124)
	at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:237)
	at org.hisp.dhis.security.intercept.XWorkSecurityInterceptor.intercept(XWorkSecurityInterceptor.java:98)
	at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:237)
	at org.hisp.dhis.interceptor.I18nInterceptor.intercept(I18nInterceptor.java:141)
	at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:237)
	at com.opensymphony.xwork2.interceptor.ChainingInterceptor.intercept(ChainingInterceptor.java:126)
	at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:237)
	at com.opensymphony.xwork2.interceptor.ParametersInterceptor.doIntercept(ParametersInterceptor.java:195)
	at com.opensymphony.xwork2.interceptor.MethodFilterInterceptor.intercept(MethodFilterInterceptor.java:87)
	at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:237)
	at com.opensymphony.xwork2.interceptor.StaticParametersInterceptor.intercept(StaticParametersInterceptor.java:179)
	at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:237)
	at org.hisp.dhis.interceptor.ExceptionInterceptor.intercept(ExceptionInterceptor.java:89)
	at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:237)
	at org.apache.struts2.impl.StrutsActionProxy.execute(StrutsActionProxy.java:52)
	at org.apache.struts2.dispatcher.Dispatcher.serviceAction(Dispatcher.java:488)
	at org.apache.struts2.dispatcher.FilterDispatcher.doFilter(FilterDispatcher.java:395)
	at org.mortbay.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1139)
	at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:343)
	at org.hisp.dhis.security.filter.RequiredLoginFilter.doFilter(RequiredLoginFilter.java:129)
	at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:355)
	at org.springframework.security.web.authentication.www.BasicAuthenticationFilter.doFilter(BasicAuthenticationFilter.java:177)
	at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:355)
	at org.hisp.dhis.security.filter.AutomaticAccessFilter.doFilter(AutomaticAccessFilter.java:112)
	at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:355)
	at org.springframework.security.web.authentication.logout.LogoutFilter.doFilter(LogoutFilter.java:105)
	at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:355)
	at org.springframework.security.web.authentication.AbstractAuthenticationProcessingFilter.doFilter(AbstractAuthenticationProcessingFilter.java:188)
	at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:355)
	at org.springframework.security.web.context.SecurityContextPersistenceFilter.doFilter(SecurityContextPersistenceFilter.java:79)
	at org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:355)
	at org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:149)
	at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:237)
	at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:167)
	at org.mortbay.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1139)
	at org.springframework.orm.hibernate3.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:198)
	at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:76)
	at org.mortbay.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1139)
	at org.mortbay.jetty.servlet.ServletHandler.handle(ServletHandler.java:378)
	at org.mortbay.jetty.security.SecurityHandler.handle(SecurityHandler.java:216)
	at org.mortbay.jetty.servlet.SessionHandler.handle(SessionHandler.java:181)
	at org.mortbay.jetty.handler.ContextHandler.handle(ContextHandler.java:765)
	at org.mortbay.jetty.webapp.WebAppContext.handle(WebAppContext.java:417)
	at org.mortbay.jetty.handler.ContextHandlerCollection.handle(ContextHandlerCollection.java:230)
	at org.mortbay.jetty.handler.HandlerWrapper.handle(HandlerWrapper.java:152)
	at org.mortbay.jetty.Server.handle(Server.java:324)
	at org.mortbay.jetty.HttpConnection.handleRequest(HttpConnection.java:535)
	at org.mortbay.jetty.HttpConnection$RequestHandler.headerComplete(HttpConnection.java:865)
	at org.mortbay.jetty.HttpParser.parseNext(HttpParser.java:539)
	at org.mortbay.jetty.HttpParser.parseAvailable(HttpParser.java:212)
	at org.mortbay.jetty.HttpConnection.handle(HttpConnection.java:404)
	at org.mortbay.io.nio.SelectChannelEndPoint.run(SelectChannelEndPoint.java:409)
	at org.mortbay.thread.QueuedThreadPool$PoolThread.run(QueuedThreadPool.java:520)
Caused by: org.h2.jdbc.JdbcSQLException: Syntax error in SQL statement "SELECT '212' AS DATAELEMENTID, PE.PERIODID, '2' AS SOURCEID, '42' AS CATEGORYOPTIONCOMBOID, '' AS VALUE, '' AS STOREDBY, '1900-01-01' AS LASTUPDATED, '' AS COMMENT, FALSE AS FOLLOWUP, ( SELECT MINVALUE FROM MINMAXDATAELEMENT WHERE SOURCEID=' 2' AND DATAELEMENTID='212' AND CATEGORYOPTIONCOMBOID='42' ) AS MINVALUE, ( SELECT MAXVALUE FROM MINMAXDATAELEMENT WHERE SOURCEID=' 2' AND DATAELEMENTID='212' AND CATEGORYOPTIONCOMBOID='42' ) AS MAXVALUE, 'STI - Genital Ulcer referrals' AS DATAELEMENTNAME, PT.NAME AS PERIODTYPENAME, PE.STARTDATE, PE.ENDDATE, 'Bo' AS SOURCENAME, '(0-4y)' AS CATEGORYOPTIONCOMBONAME FROM PERIOD AS PE JOIN PERIODTYPE AS PT USING[*] (PERIODTYPEID) WHERE PERIODID IN (5, 25, 26, 27, 28) AND PERIODTYPEID='3' AND PERIODID NOT IN ( SELECT PERIODID FROM DATAVALUE WHERE DATAELEMENTID='212' AND CATEGORYOPTIONCOMBOID='42' AND SOURCEID='2' ) "; SQL statement:
SELECT '212' AS dataelementid, pe.periodid, '2' AS sourceid, '42' AS categoryoptioncomboid, '' AS value, '' AS storedby, '1900-01-01' AS lastupdated, '' AS comment, false AS followup, ( SELECT minvalue FROM minmaxdataelement WHERE sourceid=' 2' AND dataelementid='212' AND categoryoptioncomboid='42' ) AS minvalue, ( SELECT maxvalue FROM minmaxdataelement WHERE sourceid=' 2' AND dataelementid='212' AND categoryoptioncomboid='42' ) AS maxvalue, 'STI - Genital Ulcer referrals' AS dataelementname, pt.name AS periodtypename, pe.startdate, pe.enddate, 'Bo' AS sourcename, '(0-4y)' AS categoryoptioncomboname FROM period AS pe JOIN periodtype AS pt USING (periodtypeid) WHERE periodid IN (5, 25, 26, 27, 28) AND periodtypeid='3' AND periodid NOT IN ( SELECT periodid FROM datavalue WHERE dataelementid='212' AND categoryoptioncomboid='42' AND sourceid='2' ) [42000-136]
	at org.h2.message.DbException.getJdbcSQLException(DbException.java:327)
	at org.h2.message.DbException.get(DbException.java:167)
	at org.h2.message.DbException.get(DbException.java:144)
	at org.h2.message.DbException.getSyntaxError(DbException.java:179)
	at org.h2.command.Parser.getSyntaxError(Parser.java:474)
	at org.h2.command.Parser.prepareCommand(Parser.java:238)
	at org.h2.engine.Session.prepareLocal(Session.java:420)
	at org.h2.engine.Session.prepareCommand(Session.java:381)
	at org.h2.jdbc.JdbcConnection.prepareCommand(JdbcConnection.java:1071)
	at org.h2.jdbc.JdbcStatement.executeQuery(JdbcStatement.java:70)
	at org.hisp.dhis.dataanalysis.jdbc.JdbcDataAnalysisStore.getDeflatedDataValueGaps(JdbcDataAnalysisStore.java:173)
	... 102 more
References

[Bug 633156] [NEW] Gap analysis throws SQL syntax error exception
From: Ola Hodne Titlestad, 2010-09-08