dhis2-devs team mailing list archive

[Knut Staring <knutst@xxxxxxxxx>]

Hi everyone,

Trying to start DHIS2 on Ubuntu against an empty DHIS2 database, we get the
following complaints about missing dhis2.systemsetting table.

Any hints?

Knut

---------- Forwarded message ----------
From: Jose Garcia Muñoz <josemp10@xxxxxxxxx>
Date: 2011/9/9
Subject:
To: knutst@xxxxxxxxx


* INFO  17:19:50,505 Environment variable DHIS2_HOME points to
/home/jose/dhis2/DHIS2_HOME (DefaultLocationManager.java [Thread-2])
* WARN  17:20:19,569 SQL Error: 1146, SQLState: 42S02
(JDBCExceptionReporter.java [Thread-2])
* ERROR 17:20:19,570 Table 'dhis2.systemsetting' doesn't exist
(JDBCExceptionReporter.java [Thread-2])
* ERROR 17:20:19,684 Context initialization failed (ContextLoader.java
[Thread-2])
org.springframework.beans.factory.BeanCreationException: Error creating bean
with name 'org.hisp.dhis.scheduling.SchedulingManager' defined in URL
[jar:file:/usr/local/apache-tomcat-7.0.8/webapps/dhis/WEB-INF/lib/dhis-service-reporting-2.3.jar!/META-INF/dhis/beans.xml]:
Invocation of init method failed; nested exception is
org.hibernate.exception.SQLGrammarException: could not execute query
    at
org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1420)
    at
org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:519)
    at
org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:456)
    at
org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:291)
    at
org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:222)
    at
org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:288)
    at
org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:190)
    at
org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:580)
    at
org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:895)
    at
org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:425)
    at
org.springframework.web.context.ContextLoader.createWebApplicationContext(ContextLoader.java:276)
    at
org.springframework.web.context.ContextLoader.initWebApplicationContext(ContextLoader.java:197)
    at
org.springframework.web.context.ContextLoaderListener.contextInitialized(ContextLoaderListener.java:47)
    at
org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4723)
    at
org.apache.catalina.core.StandardContext$1.call(StandardContext.java:5226)
    at
org.apache.catalina.core.StandardContext$1.call(StandardContext.java:5221)
    at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303)
    at java.util.concurrent.FutureTask.run(FutureTask.java:138)
    at
java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886)
    at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908)
    at java.lang.Thread.run(Thread.java:662)
Caused by: org.hibernate.exception.SQLGrammarException: could not execute
query
    at
org.hibernate.exception.SQLStateConverter.convert(SQLStateConverter.java:92)
    at
org.hibernate.exception.JDBCExceptionHelper.convert(JDBCExceptionHelper.java:66)
    at org.hibernate.loader.Loader.doList(Loader.java:2536)
    at org.hibernate.loader.Loader.listUsingQueryCache(Loader.java:2319)
    at org.hibernate.loader.Loader.list(Loader.java:2268)
    at
org.hibernate.loader.criteria.CriteriaLoader.list(CriteriaLoader.java:119)
    at org.hibernate.impl.SessionImpl.list(SessionImpl.java:1716)
    at org.hibernate.impl.CriteriaImpl.list(CriteriaImpl.java:347)
    at org.hibernate.impl.CriteriaImpl.uniqueResult(CriteriaImpl.java:369)
    at
org.hisp.dhis.hibernate.HibernateGenericStore.getObject(HibernateGenericStore.java:159)
    at
org.hisp.dhis.hibernate.HibernateGenericStore.getByName(HibernateGenericStore.java:219)
    at
org.hisp.dhis.options.setting.DefaultSystemSettingManager.getSystemSetting(DefaultSystemSettingManager.java:106)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
    at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
    at java.lang.reflect.Method.invoke(Method.java:597)
    at
org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:309)
    at
org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
    at
org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
    at
org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:110)
    at
org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
    at
org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202)
    at $Proxy30.getSystemSetting(Unknown Source)
    at
org.hisp.dhis.scheduling.DefaultSchedulingManager.getRunnables(DefaultSchedulingManager.java:122)
    at
org.hisp.dhis.scheduling.DefaultSchedulingManager.scheduleTasks(DefaultSchedulingManager.java:77)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
    at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
    at java.lang.reflect.Method.invoke(Method.java:597)
    at
org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeCustomInitMethod(AbstractAutowireCapableBeanFactory.java:1544)
    at
org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.invokeInitMethods(AbstractAutowireCapableBeanFactory.java:1485)
    at
org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.initializeBean(AbstractAutowireCapableBeanFactory.java:1417)
    ... 20 more
Caused by: com.mysql.jdbc.exceptions.jdbc4.MySQLSyntaxErrorException: Table
'dhis2.systemsetting' doesn't exist
    at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
    at
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:39)
    at
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:27)
    at java.lang.reflect.Constructor.newInstance(Constructor.java:513)
    at com.mysql.jdbc.Util.handleNewInstance(Util.java:406)
    at com.mysql.jdbc.Util.getInstance(Util.java:381)
    at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:1030)
    at com.mysql.jdbc.SQLError.createSQLException(SQLError.java:956)
    at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3491)
    at com.mysql.jdbc.MysqlIO.checkErrorPacket(MysqlIO.java:3423)
    at com.mysql.jdbc.MysqlIO.sendCommand(MysqlIO.java:1936)
    at com.mysql.jdbc.MysqlIO.sqlQueryDirect(MysqlIO.java:2060)
    at com.mysql.jdbc.ConnectionImpl.execSQL(ConnectionImpl.java:2542)
    at
com.mysql.jdbc.PreparedStatement.executeInternal(PreparedStatement.java:1734)
    at
com.mysql.jdbc.PreparedStatement.executeQuery(PreparedStatement.java:1885)
    at
com.mchange.v2.c3p0.impl.NewProxyPreparedStatement.executeQuery(NewProxyPreparedStatement.java:76)
    at
org.hibernate.jdbc.AbstractBatcher.getResultSet(AbstractBatcher.java:208)
    at org.hibernate.loader.Loader.getResultSet(Loader.java:1953)
    at org.hibernate.loader.Loader.doQuery(Loader.java:802)
    at
org.hibernate.loader.Loader.doQueryAndInitializeNonLazyCollections(Loader.java:274)
    at org.hibernate.loader.Loader.doList(Loader.java:2533)
    ... 49 more
09-sep-2011 17:20:19 org.apache.catalina.core.StandardContext startInternal
GRAVE: Error listenerStart
09-sep-2011 17:20:19 org.apache.catalina.core.StandardContext startInternal
GRAVE: Falló en arranque del Contexto [/dhis] debido a errores previos
09-sep-2011 17:20:19 org.apache.catalina.loader.WebappClassLoader
clearReferencesJdbc
GRAVE: La aplicación web [/dhis] registró el conductor JDBC
[com.mysql.jdbc.Driver] pero falló al anular el registro mientras la
aplicación web estaba parada. Para prevenir un fallo de memoria, se ha
anulado el registro del conductor JDBC por la fuerza.
09-sep-2011 17:20:19 org.apache.catalina.loader.WebappClassLoader
clearReferencesThreads
GRAVE: La aplicación web [/dhis] parece haber arrancado un hilo llamado
[MySQL Statement Cancellation Timer] pero no ha podido pararlo. Esto tiene
todas las papeletas de convertirse en un fallo de memoria.




-- 
Knut Staring
Department of Informatics
University of Oslo
http://hisp.uio.no
+4722952249