dhis2-devs team mailing list archive

[Jason Pickering <jason.p.pickering@xxxxxxxxx>]

Not sure why this is popping up now a a fresh install. WHere is this
log attempting to be written? Using 2.9


* ERROR 2012-09-25 09:30:27,805 Context initialization failed
(ContextLoader.java [pool-2-thread-1])
org.springframework.beans.factory.BeanCreationException: Error
creating bean with name
'org.hisp.dhis.system.velocity.VelocityManager' defined in URL
[jar:file:/var/lib/tomcat7/webapps/dhis/WEB-INF/lib/dhis-support-system-2.9.jar!/META-INF/dhis/beans.xml]:
Instantiation of bean failed; nested exception is
org.springframework.beans.BeanInstantiationException: Could not
instantiate bean class
[org.hisp.dhis.system.velocity.VelocityManager]: Constructor threw
exception; nested exception is
org.apache.velocity.exception.VelocityException: Error initializing
log: Failed to initialize an instance of
org.apache.velocity.runtime.log.Log4JLogChute with the current runtime
configuration.
        at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateBean(AbstractAutowireCapableBeanFactory.java:997)
        at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBeanInstance(AbstractAutowireCapableBeanFactory.java:943)
        at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.doCreateBean(AbstractAutowireCapableBeanFactory.java:485)
        at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.createBean(AbstractAutowireCapableBeanFactory.java:456)
        at org.springframework.beans.factory.support.AbstractBeanFactory$1.getObject(AbstractBeanFactory.java:294)
        at org.springframework.beans.factory.support.DefaultSingletonBeanRegistry.getSingleton(DefaultSingletonBeanRegistry.java:225)
        at org.springframework.beans.factory.support.AbstractBeanFactory.doGetBean(AbstractBeanFactory.java:291)
        at org.springframework.beans.factory.support.AbstractBeanFactory.getBean(AbstractBeanFactory.java:193)
        at org.springframework.beans.factory.support.DefaultListableBeanFactory.preInstantiateSingletons(DefaultListableBeanFactory.java:585)
        at org.springframework.context.support.AbstractApplicationContext.finishBeanFactoryInitialization(AbstractApplicationContext.java:913)
        at org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:464)
        at org.springframework.web.context.ContextLoader.configureAndRefreshWebApplicationContext(ContextLoader.java:385)
        at org.springframework.web.context.ContextLoader.initWebApplicationContext(ContextLoader.java:284)
        at org.springframework.web.context.ContextLoaderListener.contextInitialized(ContextLoaderListener.java:111)
        at org.apache.catalina.core.StandardContext.listenerStart(StandardContext.java:4779)
        at org.apache.catalina.core.StandardContext.startInternal(StandardContext.java:5273)
        at org.apache.catalina.util.LifecycleBase.start(LifecycleBase.java:150)
        at org.apache.catalina.core.ContainerBase.addChildInternal(ContainerBase.java:895)
        at org.apache.catalina.core.ContainerBase.addChild(ContainerBase.java:871)
        at org.apache.catalina.core.StandardHost.addChild(StandardHost.java:615)
        at org.apache.catalina.startup.HostConfig.deployWAR(HostConfig.java:958)
        at org.apache.catalina.startup.HostConfig$DeployWar.run(HostConfig.java:1599)
        at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
        at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334)
        at java.util.concurrent.FutureTask.run(FutureTask.java:166)
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1110)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603)
        at java.lang.Thread.run(Thread.java:679)
Caused by: org.springframework.beans.BeanInstantiationException: Could
not instantiate bean class
[org.hisp.dhis.system.velocity.VelocityManager]: Constructor threw
exception; nested exception is
org.apache.velocity.exception.VelocityException: Error initializing
log: Failed to initialize an instance of
org.apache.velocity.runtime.log.Log4JLogChute with the current runtime
configuration.
        at org.springframework.beans.BeanUtils.instantiateClass(BeanUtils.java:162)
        at org.springframework.beans.factory.support.SimpleInstantiationStrategy.instantiate(SimpleInstantiationStrategy.java:76)
        at org.springframework.beans.factory.support.AbstractAutowireCapableBeanFactory.instantiateBean(AbstractAutowireCapableBeanFactory.java:990)
        ... 27 more
Caused by: org.apache.velocity.exception.VelocityException: Error
initializing log: Failed to initialize an instance of
org.apache.velocity.runtime.log.Log4JLogChute with the current runtime
configuration.
        at org.apache.velocity.runtime.RuntimeInstance.initializeLog(RuntimeInstance.java:875)
        at org.apache.velocity.runtime.RuntimeInstance.init(RuntimeInstance.java:262)
        at org.apache.velocity.app.VelocityEngine.init(VelocityEngine.java:93)
        at org.hisp.dhis.system.velocity.VelocityManager.<init>(VelocityManager.java:60)
        at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
        at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
        at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
        at java.lang.reflect.Constructor.newInstance(Constructor.java:532)
        at org.springframework.beans.BeanUtils.instantiateClass(BeanUtils.java:147)
        ... 29 more
Caused by: org.apache.velocity.exception.VelocityException: Failed to
initialize an instance of
org.apache.velocity.runtime.log.Log4JLogChute with the current runtime
configuration.
        at org.apache.velocity.runtime.log.LogManager.createLogChute(LogManager.java:220)
        at org.apache.velocity.runtime.log.LogManager.updateLog(LogManager.java:269)
        at org.apache.velocity.runtime.RuntimeInstance.initializeLog(RuntimeInstance.java:871)
        ... 37 more
Caused by: java.lang.RuntimeException: Error configuring Log4JLogChute :
        at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
        at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
        at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
        at java.lang.reflect.Constructor.newInstance(Constructor.java:532)
        at org.apache.velocity.util.ExceptionUtils.createWithCause(ExceptionUtils.java:67)
        at org.apache.velocity.util.ExceptionUtils.createRuntimeException(ExceptionUtils.java:45)
        at org.apache.velocity.runtime.log.Log4JLogChute.initAppender(Log4JLogChute.java:133)
        at org.apache.velocity.runtime.log.Log4JLogChute.init(Log4JLogChute.java:85)
        at org.apache.velocity.runtime.log.LogManager.createLogChute(LogManager.java:157)
        ... 39 more
Caused by: java.io.FileNotFoundException: velocity.log (Permission denied)
        at java.io.FileOutputStream.openAppend(Native Method)
        at java.io.FileOutputStream.<init>(FileOutputStream.java:207)
        at java.io.FileOutputStream.<init>(FileOutputStream.java:131)
        at org.apache.log4j.FileAppender.setFile(FileAppender.java:294)
        at org.apache.log4j.RollingFileAppender.setFile(RollingFileAppender.java:207)
        at org.apache.log4j.FileAppender.<init>(FileAppender.java:110)
        at org.apache.log4j.RollingFileAppender.<init>(RollingFileAppender.java:79)
        at org.apache.velocity.runtime.log.Log4JLogChute.initAppender(Log4JLogChute.java:118)
        ... 41 more
Sep 25, 2012 9:30:27 AM org.apache.catalina.core.StandardContext startInternal
SEVERE: Error listenerStart
Sep 25, 2012 9:30:27 AM org.apache.catalina.core.StandardContext startInternal
SEVERE: Context [/dhis] startup failed due to previous errors
* INFO  2012-09-25 09:30:27,821 De-registering jdbc driver:
org.postgresql.Driver@22893e69 (StartupListener.java
[pool-2-thread-1])
Sep 25, 2012 9:30:27 AM org.apache.catalina.loader.WebappClassLoader
clearReferencesThreads
SEVERE: The web application [/dhis] appears to have started a thread
named [Camel Thread 0 - ShutdownTask] but has failed to stop it. This
is very likely to create a memory leak.
Sep 25, 2012 9:30:27 AM org.apache.catalina.loader.WebappClassLoader
checkThreadLocalMapForLeaks
SEVERE: The web application [/dhis] created a ThreadLocal with key of
type [com.sun.xml.bind.v2.ClassFactory$1] (value
[com.sun.xml.bind.v2.ClassFactory$1@55ac8c3d]) and a value of type
[java.util.WeakHashMap] (value [{class
org.apache.camel.model.PackageScanDefinition=java.lang.ref.WeakReference@454e3bb0,
class org.apache.camel.spring.CamelProducerTemplateFactoryBean=java.lang.ref.WeakReference@1330c35c,
class java.util.ArrayList=java.lang.ref.WeakReference@6669d6db, class
org.apache.camel.spring.CamelContextFactoryBean=java.lang.ref.WeakReference@2e98f864,
class javax.xml.bind.annotation.adapters.CollapsedStringAdapter=java.lang.ref.WeakReference@3cdb8522}])
but failed to remove it when the web application was stopped. Threads
are going to be renewed over time to try and avoid a probable memory
leak.
Sep 25, 2012 9:30:27 AM org.apache.catalina.startup.HostConfig deployDirectory
INFO: Deploying web application directory /var/lib/tomcat7/webapps/ROOT
Sep 25, 2012 9:30:28 AM org.apache.coyote.AbstractProtocol start
INFO: Starting ProtocolHandler ["http-bio-8080"]
Sep 25, 2012 9:30:28 AM org.apache.catalina.startup.Catalina start
INFO: Server startup in 79479 ms