dhis2-devs team mailing list archive

[Morten Olav Hansen <morten@xxxxxxxxx>]

Hi Timothy

This should now be fixed in latest 224, 225 and master.

-- 
Morten Olav Hansen
Senior Engineer, DHIS 2
University of Oslo
http://www.dhis2.org

On Wed, Nov 16, 2016 at 10:47 AM, Morten Olav Hansen <morten@xxxxxxxxx>
wrote:

> I found the issue, will have a fix ready today.
>
> --
> Morten Olav Hansen
> Senior Engineer, DHIS 2
> University of Oslo
> http://www.dhis2.org
>
> On Wed, Nov 16, 2016 at 10:32 AM, Morten Olav Hansen <morten@xxxxxxxxx>
> wrote:
>
>> Hi
>>
>> I have started to look at this now, just a quick question.. when you say
>> one of the latest builds? from when was it? there was a bunch of these
>> kinds of issues fixed last week (transient object xyz)
>>
>> --
>> Morten Olav Hansen
>> Senior Engineer, DHIS 2
>> University of Oslo
>> http://www.dhis2.org
>>
>> On Wed, Nov 16, 2016 at 1:15 AM, Morten Olav Hansen <morten@xxxxxxxxx>
>> wrote:
>>
>>> Hi Tim
>>>
>>> Will have a look tomorrow, probably requires a bit of special handling.
>>>
>>> --
>>> Morten Olav Hansen
>>> Senior Engineer, DHIS 2
>>> University of Oslo
>>> http://www.dhis2.org
>>>
>>> On Tue, Nov 15, 2016 at 10:52 PM, Timothy Harding <
>>> tharding@xxxxxxxxxxxxxx> wrote:
>>>
>>>> Hello hello!
>>>>
>>>> Jim Grace and I have been attempting to upload validation rules via the
>>>> (new?) /##/metadata, currently we are using one of the latest builds of
>>>> 2.24.
>>>>
>>>> When I upload via the import metadata via the gui it works as well as
>>>> uploading to the older /api/metaData/
>>>> * INFO  2016-11-15 15:47:28,262 Import done. Completed in 2274.20
>>>> seconds. (DefaultImportService.java [http-nio-18080-exec-8])
>>>>
>>>> But when I use the newer location below it fails and gives me this
>>>> response back:
>>>>
>>>> {"httpStatus":"Internal Server Error","httpStatusCode":500,"s
>>>> tatus":"ERROR","message":"object references an unsaved transient
>>>> instance - save the transient instance before flushing:
>>>> org.hisp.dhis.dataelement.DataElement"}
>>>>
>>>> Error using /api/24/metadata
>>>>
>>>> * INFO  2016-11-15 15:04:10,802 (system_dev-mer2.datim.org)
>>>> Import:Start (DefaultMetadataImportService.java
>>>> [http-nio-18080-exec-20])
>>>> * INFO  2016-11-15 15:04:16,319 (system_dev-mer2.datim.org)
>>>> Import:Preheat[REFERENCE] took 5.51 seconds (DefaultPreheatService.java
>>>> [http-nio-18080-exec-20])
>>>> * INFO  2016-11-15 15:04:16,323 (system_dev-mer2.datim.org)
>>>> Import:Validation took 0.00 seconds (DefaultObjectBundleValidationService.java
>>>> [http-nio-18080-exec-20])
>>>> * INFO  2016-11-15 15:04:16,324 (system_dev-mer2.datim.org) Updating
>>>> 184 object(s) of type ValidationRule (DefaultObjectBundleService.java
>>>> [http-nio-18080-exec-20])
>>>> org.hibernate.TransientObjectException: object references an unsaved
>>>> transient instance - save the transient instance before flushing:
>>>> org.hisp.dhis.dataelement.DataElement
>>>> at org.hibernate.engine.internal.ForeignKeys.getEntityIdentifie
>>>> rIfNotUnsaved(ForeignKeys.java:279)
>>>> at org.hibernate.type.EntityType.getIdentifier(EntityType.java:455)
>>>> at org.hibernate.type.ManyToOneType.nullSafeSet(ManyToOneType.java:144)
>>>> at org.hibernate.persister.collection.AbstractCollectionPersist
>>>> er.writeElement(AbstractCollectionPersister.java:888)
>>>> at org.hibernate.persister.collection.AbstractCollectionPersist
>>>> er.recreate(AbstractCollectionPersister.java:1307)
>>>> at org.hibernate.action.internal.CollectionRecreateAction.execu
>>>> te(CollectionRecreateAction.java:50)
>>>> at org.hibernate.engine.spi.ActionQueue.executeActions(ActionQu
>>>> eue.java:560)
>>>> at org.hibernate.engine.spi.ActionQueue.executeActions(ActionQu
>>>> eue.java:434)
>>>> at org.hibernate.event.internal.AbstractFlushingEventListener.p
>>>> erformExecutions(AbstractFlushingEventListener.java:337)
>>>> at org.hibernate.event.internal.DefaultFlushEventListener.onFlu
>>>> sh(DefaultFlushEventListener.java:39)
>>>> at org.hibernate.internal.SessionImpl.flush(SessionImpl.java:1295)
>>>> at org.hisp.dhis.dxf2.metadata2.objectbundle.DefaultObjectBundl
>>>> eService.commit(DefaultObjectBundleService.java:156)
>>>> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>>>> at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAcce
>>>> ssorImpl.java:62)
>>>> at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMe
>>>> thodAccessorImpl.java:43)
>>>> at java.lang.reflect.Method.invoke(Method.java:498)
>>>> at org.springframework.aop.support.AopUtils.invokeJoinpointUsin
>>>> gReflection(AopUtils.java:302)
>>>> at org.springframework.aop.framework.ReflectiveMethodInvocation
>>>> .invokeJoinpoint(ReflectiveMethodInvocation.java:190)
>>>> at org.springframework.aop.framework.ReflectiveMethodInvocation
>>>> .proceed(ReflectiveMethodInvocation.java:157)
>>>> at org.springframework.transaction.interceptor.TransactionInter
>>>> ceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
>>>> at org.springframework.transaction.interceptor.TransactionAspec
>>>> tSupport.invokeWithinTransaction(TransactionAspectSupport.java:281)
>>>> at org.springframework.transaction.interceptor.TransactionInter
>>>> ceptor.invoke(TransactionInterceptor.java:96)
>>>> at org.springframework.aop.framework.ReflectiveMethodInvocation
>>>> .proceed(ReflectiveMethodInvocation.java:179)
>>>> at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(
>>>> JdkDynamicAopProxy.java:208)
>>>> at com.sun.proxy.$Proxy189.commit(Unknown Source)
>>>> at org.hisp.dhis.dxf2.metadata2.DefaultMetadataImportService.im
>>>> portMetadata(DefaultMetadataImportService.java:104)
>>>> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>>>> at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAcce
>>>> ssorImpl.java:62)
>>>> at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMe
>>>> thodAccessorImpl.java:43)
>>>> at java.lang.reflect.Method.invoke(Method.java:498)
>>>> at org.springframework.aop.support.AopUtils.invokeJoinpointUsin
>>>> gReflection(AopUtils.java:302)
>>>> at org.springframework.aop.framework.ReflectiveMethodInvocation
>>>> .invokeJoinpoint(ReflectiveMethodInvocation.java:190)
>>>> at org.springframework.aop.framework.ReflectiveMethodInvocation
>>>> .proceed(ReflectiveMethodInvocation.java:157)
>>>> at org.springframework.transaction.interceptor.TransactionInter
>>>> ceptor$1.proceedWithInvocation(TransactionInterceptor.java:99)
>>>> at org.springframework.transaction.interceptor.TransactionAspec
>>>> tSupport.invokeWithinTransaction(TransactionAspectSupport.java:281)
>>>> at org.springframework.transaction.interceptor.TransactionInter
>>>> ceptor.invoke(TransactionInterceptor.java:96)
>>>> at org.springframework.aop.framework.ReflectiveMethodInvocation
>>>> .proceed(ReflectiveMethodInvocation.java:179)
>>>> at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(
>>>> JdkDynamicAopProxy.java:208)
>>>> at com.sun.proxy.$Proxy191.importMetadata(Unknown Source)
>>>> at org.hisp.dhis.webapi.controller.metadata.MetadataImportContr
>>>> oller.postJsonMetadata(MetadataImportController.java:87)
>>>> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
>>>> at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAcce
>>>> ssorImpl.java:62)
>>>> at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMe
>>>> thodAccessorImpl.java:43)
>>>> at java.lang.reflect.Method.invoke(Method.java:498)
>>>> at org.springframework.web.method.support.InvocableHandlerMetho
>>>> d.doInvoke(InvocableHandlerMethod.java:221)
>>>> at org.springframework.web.method.support.InvocableHandlerMetho
>>>> d.invokeForRequest(InvocableHandlerMethod.java:136)
>>>> at org.springframework.web.servlet.mvc.method.annotation.Servle
>>>> tInvocableHandlerMethod.invokeAndHandle(ServletInvocableHand
>>>> lerMethod.java:110)
>>>> at org.springframework.web.servlet.mvc.method.annotation.Reques
>>>> tMappingHandlerAdapter.invokeHandlerMethod(RequestMappingHan
>>>> dlerAdapter.java:817)
>>>> at org.springframework.web.servlet.mvc.method.annotation.Reques
>>>> tMappingHandlerAdapter.handleInternal(RequestMappingHandlerA
>>>> dapter.java:731)
>>>> at org.springframework.web.servlet.mvc.method.AbstractHandlerMe
>>>> thodAdapter.handle(AbstractHandlerMethodAdapter.java:85)
>>>> at org.springframework.web.servlet.DispatcherServlet.doDispatch
>>>> (DispatcherServlet.java:959)
>>>> at org.springframework.web.servlet.DispatcherServlet.doService(
>>>> DispatcherServlet.java:893)
>>>> at org.springframework.web.servlet.FrameworkServlet.processRequ
>>>> est(FrameworkServlet.java:968)
>>>> at org.springframework.web.servlet.FrameworkServlet.doPost(Fram
>>>> eworkServlet.java:870)
>>>> at javax.servlet.http.HttpServlet.service(HttpServlet.java:650)
>>>> at org.springframework.web.servlet.FrameworkServlet.service(Fra
>>>> meworkServlet.java:844)
>>>> at javax.servlet.http.HttpServlet.service(HttpServlet.java:731)
>>>> at org.apache.catalina.core.ApplicationFilterChain.internalDoFi
>>>> lter(ApplicationFilterChain.java:303)
>>>> at org.apache.catalina.core.ApplicationFilterChain.doFilter(App
>>>> licationFilterChain.java:208)
>>>> at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilte
>>>> r.java:52)
>>>> at org.apache.catalina.core.ApplicationFilterChain.internalDoFi
>>>> lter(ApplicationFilterChain.java:241)
>>>> at org.apache.catalina.core.ApplicationFilterChain.doFilter(App
>>>> licationFilterChain.java:208)
>>>> at org.springframework.security.web.FilterChainProxy$VirtualFil
>>>> terChain.doFilter(FilterChainProxy.java:330)
>>>> at org.springframework.security.web.access.intercept.FilterSecu
>>>> rityInterceptor.invoke(FilterSecurityInterceptor.java:118)
>>>> at org.springframework.security.web.access.intercept.FilterSecu
>>>> rityInterceptor.doFilter(FilterSecurityInterceptor.java:84)
>>>> at org.springframework.security.web.FilterChainProxy$VirtualFil
>>>> terChain.doFilter(FilterChainProxy.java:342)
>>>> at org.springframework.security.web.access.ExceptionTranslation
>>>> Filter.doFilter(ExceptionTranslationFilter.java:113)
>>>> at org.springframework.security.web.FilterChainProxy$VirtualFil
>>>> terChain.doFilter(FilterChainProxy.java:342)
>>>> at org.springframework.security.web.session.SessionManagementFi
>>>> lter.doFilter(SessionManagementFilter.java:103)
>>>> at org.springframework.security.web.FilterChainProxy$VirtualFil
>>>> terChain.doFilter(FilterChainProxy.java:342)
>>>> at org.springframework.security.web.authentication.AnonymousAut
>>>> henticationFilter.doFilter(AnonymousAuthenticationFilter.java:113)
>>>> at org.springframework.security.web.FilterChainProxy$VirtualFil
>>>> terChain.doFilter(FilterChainProxy.java:342)
>>>> at org.springframework.security.web.servletapi.SecurityContextH
>>>> olderAwareRequestFilter.doFilter(SecurityContextHolderAwareR
>>>> equestFilter.java:154)
>>>> at org.springframework.security.web.FilterChainProxy$VirtualFil
>>>> terChain.doFilter(FilterChainProxy.java:342)
>>>> at org.springframework.security.web.savedrequest.RequestCacheAw
>>>> areFilter.doFilter(RequestCacheAwareFilter.java:45)
>>>> at org.springframework.security.web.FilterChainProxy$VirtualFil
>>>> terChain.doFilter(FilterChainProxy.java:342)
>>>> at org.springframework.security.web.authentication.www.BasicAut
>>>> henticationFilter.doFilter(BasicAuthenticationFilter.java:201)
>>>> at org.springframework.security.web.FilterChainProxy$VirtualFil
>>>> terChain.doFilter(FilterChainProxy.java:342)
>>>> at org.hisp.dhis.security.filter.CorsFilter.doFilter(CorsFilter
>>>> .java:91)
>>>> at org.springframework.security.web.FilterChainProxy$VirtualFil
>>>> terChain.doFilter(FilterChainProxy.java:342)
>>>> at org.springframework.security.web.authentication.AbstractAuth
>>>> enticationProcessingFilter.doFilter(AbstractAuthenticationPr
>>>> ocessingFilter.java:199)
>>>> at org.springframework.security.web.FilterChainProxy$VirtualFil
>>>> terChain.doFilter(FilterChainProxy.java:342)
>>>> at org.springframework.security.web.authentication.AbstractAuth
>>>> enticationProcessingFilter.doFilter(AbstractAuthenticationPr
>>>> ocessingFilter.java:199)
>>>> at org.springframework.security.web.FilterChainProxy$VirtualFil
>>>> terChain.doFilter(FilterChainProxy.java:342)
>>>> at org.hisp.dhis.security.filter.CustomAuthenticationFilter.doF
>>>> ilter(CustomAuthenticationFilter.java:64)
>>>> at org.springframework.security.web.FilterChainProxy$VirtualFil
>>>> terChain.doFilter(FilterChainProxy.java:342)
>>>> at org.springframework.security.oauth2.provider.authentication.
>>>> OAuth2AuthenticationProcessingFilter.doFilter(OAuth2Authenti
>>>> cationProcessingFilter.java:140)
>>>> at org.springframework.security.web.FilterChainProxy$VirtualFil
>>>> terChain.doFilter(FilterChainProxy.java:342)
>>>> at org.springframework.security.web.authentication.logout.Logou
>>>> tFilter.doFilter(LogoutFilter.java:110)
>>>> at org.springframework.security.web.FilterChainProxy$VirtualFil
>>>> terChain.doFilter(FilterChainProxy.java:342)
>>>> at org.hisp.dhis.security.filter.AutomaticAccessFilter.doFilter
>>>> (AutomaticAccessFilter.java:115)
>>>> at org.springframework.security.web.FilterChainProxy$VirtualFil
>>>> terChain.doFilter(FilterChainProxy.java:342)
>>>> at org.springframework.security.web.header.HeaderWriterFilter.d
>>>> oFilterInternal(HeaderWriterFilter.java:57)
>>>> at org.springframework.web.filter.OncePerRequestFilter.doFilter
>>>> (OncePerRequestFilter.java:107)
>>>> at org.springframework.security.web.FilterChainProxy$VirtualFil
>>>> terChain.doFilter(FilterChainProxy.java:342)
>>>> at org.springframework.security.web.context.request.async.WebAs
>>>> yncManagerIntegrationFilter.doFilterInternal(WebAsyncManager
>>>> IntegrationFilter.java:50)
>>>> at org.springframework.web.filter.OncePerRequestFilter.doFilter
>>>> (OncePerRequestFilter.java:107)
>>>> at org.springframework.security.web.FilterChainProxy$VirtualFil
>>>> terChain.doFilter(FilterChainProxy.java:342)
>>>> at org.springframework.security.web.context.SecurityContextPers
>>>> istenceFilter.doFilter(SecurityContextPersistenceFilter.java:87)
>>>> at org.springframework.security.web.FilterChainProxy$VirtualFil
>>>> terChain.doFilter(FilterChainProxy.java:342)
>>>> at org.springframework.security.web.FilterChainProxy.doFilterIn
>>>> ternal(FilterChainProxy.java:192)
>>>> at org.springframework.security.web.FilterChainProxy.doFilter(F
>>>> ilterChainProxy.java:160)
>>>> at org.springframework.web.filter.DelegatingFilterProxy.invokeD
>>>> elegate(DelegatingFilterProxy.java:346)
>>>> at org.springframework.web.filter.DelegatingFilterProxy.doFilte
>>>> r(DelegatingFilterProxy.java:262)
>>>> at org.apache.catalina.core.ApplicationFilterChain.internalDoFi
>>>> lter(ApplicationFilterChain.java:241)
>>>> at org.apache.catalina.core.ApplicationFilterChain.doFilter(App
>>>> licationFilterChain.java:208)
>>>> at org.springframework.web.filter.ShallowEtagHeaderFilter.doFil
>>>> terInternal(ShallowEtagHeaderFilter.java:87)
>>>> at org.hisp.dhis.servlet.filter.ExcludableShallowEtagHeaderFilt
>>>> er.doFilterInternal(ExcludableShallowEtagHeaderFilter.java:102)
>>>> at org.springframework.web.filter.OncePerRequestFilter.doFilter
>>>> (OncePerRequestFilter.java:107)
>>>> at org.apache.catalina.core.ApplicationFilterChain.internalDoFi
>>>> lter(ApplicationFilterChain.java:241)
>>>> at org.apache.catalina.core.ApplicationFilterChain.doFilter(App
>>>> licationFilterChain.java:208)
>>>> at org.springframework.orm.hibernate5.support.OpenSessionInView
>>>> Filter.doFilterInternal(OpenSessionInViewFilter.java:151)
>>>> at org.springframework.web.filter.OncePerRequestFilter.doFilter
>>>> (OncePerRequestFilter.java:107)
>>>> at org.apache.catalina.core.ApplicationFilterChain.internalDoFi
>>>> lter(ApplicationFilterChain.java:241)
>>>> at org.apache.catalina.core.ApplicationFilterChain.doFilter(App
>>>> licationFilterChain.java:208)
>>>> at org.springframework.web.filter.CharacterEncodingFilter.doFil
>>>> terInternal(CharacterEncodingFilter.java:121)
>>>> at org.springframework.web.filter.OncePerRequestFilter.doFilter
>>>> (OncePerRequestFilter.java:107)
>>>> at org.apache.catalina.core.ApplicationFilterChain.internalDoFi
>>>> lter(ApplicationFilterChain.java:241)
>>>> at org.apache.catalina.core.ApplicationFilterChain.doFilter(App
>>>> licationFilterChain.java:208)
>>>> at org.apache.catalina.core.StandardWrapperValve.invoke(Standar
>>>> dWrapperValve.java:220)
>>>> at org.apache.catalina.core.StandardContextValve.invoke(Standar
>>>> dContextValve.java:122)
>>>> at org.apache.catalina.authenticator.AuthenticatorBase.invoke(A
>>>> uthenticatorBase.java:505)
>>>> at org.apache.catalina.core.StandardHostValve.invoke(StandardHo
>>>> stValve.java:169)
>>>> at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorRepo
>>>> rtValve.java:103)
>>>> at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogVa
>>>> lve.java:956)
>>>> at org.apache.catalina.valves.RemoteIpValve.invoke(RemoteIpValv
>>>> e.java:683)
>>>> at org.apache.catalina.core.StandardEngineValve.invoke(Standard
>>>> EngineValve.java:116)
>>>> at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAd
>>>> apter.java:436)
>>>> at org.apache.coyote.http11.AbstractHttp11Processor.process(Abs
>>>> tractHttp11Processor.java:1078)
>>>> at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler
>>>> .process(AbstractProtocol.java:625)
>>>> at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun
>>>> (NioEndpoint.java:1757)
>>>> at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.run(N
>>>> ioEndpoint.java:1716)
>>>> at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPool
>>>> Executor.java:1142)
>>>> at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoo
>>>> lExecutor.java:617)
>>>> at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.r
>>>> un(TaskThread.java:61)
>>>> at java.lang.Thread.run(Thread.java:745)
>>>>
>>>> Any ideas? Should we stick with /api/metaData for now? I ask mostly
>>>> because this method takes more than 360 seconds currently with preheat off
>>>> and 2200+ seconds with it on.
>>>>
>>>>
>>>> *Timothy Harding*
>>>> Sr. Systems Analyst, BAO Systems
>>>> +1 202-536-1541 | tharding@xxxxxxxxxxxxxx | http://www.baosystems.com |
>>>>  Skype: hardingt@xxxxxxxxx | 2900 K Street, Suite 404, Washington D.C.
>>>> 20007
>>>>
>>>> _______________________________________________
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>>>>
>>>>
>>>
>>
>