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Message #03110
Re: using a CSV file for visualization
Randy,
Very useful thanks.
Is there a way to visualize the datavalueset and map it to the local EMR
data model (as SQL queries)? Or is everything done by hand (eg, view
schema, do SQL query, parse results into XML template)...
Alvin
On Oct 10, 2013 10:12 PM, "Wilson,Randy" <rwilson@xxxxxxx> wrote:
> Hi Alison,****
>
> ** **
>
> In Rwanda we’re doing quite a bit by importing external data into a DHIS-2
> instance that we call the “Data warehouse”.****
>
> ** **
>
> Often this comes in as CSV files that we import into a temporary table
> we’ve created in the DHIS and then we create a SQL script to import it into
> the datavalues table. This table has a lot of data integrity constraints
> that make it difficult to import data. ****
>
> ** **
>
> Below are a couple of tips for the 4 required fields that in combination
> must be unique:****
>
> ** **
>
> **1. **In order to fill the sourceid field, be sure to use the code
> field in the organisationunit table to store the facility code for the
> reporting units from your local EMR (perhaps in this case all data are from
> one facility). Then you can link to the organisationunit table to pull the
> appropriate organisationunitid. ****
>
> **2. **Make sure to create the dataelements in the DHIS-2 that
> correspond to your indicators and that you store the dataelement id in your
> OpenMRS system or store the OpenMRS concept code in the dataelement code
> field so that you can map to the dataelementid on import.****
>
> **3. **Periodid: this may be a challenge for you if the data you
> are importing are not of any specific periodicity. I believe the smallest
> reporting period in DHIS-2 is currently daily. If your data show hourly
> updates of lab test values you may not be able to import them into DHIS-2.
> ****
>
> **4. **Categoryoptioncomboid: if your data does not have
> dimensions (i.e. M/F, age group), look up the value for “default” – often
> 13 or 14 and use that to fill this column.****
>
> ** **
>
> Also the value stored in the DHIS-2 is actually a text field, so be sure
> to convert the values to strings before importing.****
>
> ** **
>
> As always, after importing or adding new data be sure to run the analytics
> table process or you won’t see your new data.****
>
> ** **
>
> Randy****
>
> ** **
>
> ** **
>
> *From:* Dhis2-users [mailto:dhis2-users-bounces+rwilson=
> msh.org@xxxxxxxxxxxxxxxxxxx] *On Behalf Of *Alison Perez
> *Sent:* Wednesday, October 09, 2013 6:10 PM
> *To:* dhis2-users@xxxxxxxxxxxxxxxxxxx
> *Subject:* [Dhis2-users] using a CSV file for visualization****
>
> ** **
>
> Greetings to the DHIS2 community. I wish to consult the group on strategy
> and general procedures on how to use a CSV file as a data source for DHIS2
> graphs. We have a local electronic medical record in our provincial
> hospital that generates a CSV file with each data set representing
> numerical values for an indicator. While XML might be a better file format,
> we are generating CSV due to the need to have the data be shared to another
> system. I was hoping to utilize DHIS2's graphing capability by feeding the
> CSV to the DHIS2 engine. Is this possible and how?****
>
> thank you very much.****
>
> ** **
>
>
> ****
>
>
> --
> Alison O. Perez
> Software Developer
> Wireless Access for Health (WAH)
> Province of Tarlac, Philippines
>
> Linkedin Profile: ph.linkedin.com/pub/alison-perez/56/44/a65/
> Personal Blog: http://darthblitzkrieg.blogspot.com
> ICT4D/H Blog: http://alisonperez.tk
> Skype / IM: darth_ali
>
> "Daring ideas are like chessmen moved forward; they may be beaten, but
> they
> may start a winning game." -- Johann Wolfgang Goethe*****
>
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