dolfin team mailing list archive

[Alireza Forghani <arforghani@xxxxxxxxx>]

Hi Anders,

Thats right when I run dolfin-config --cflags from /src/config it returns:

-I/data/alireza/dolfin-0.6.1/local/include -I../../src/kernel/common 
-I../../src/kernel/fem -I../../src/kernel/form 
-I../../src/kernel/function -I../../src/kernel/io -I../../src/kernel/la 
-I../../src/kernel/main -I../../src/kernel/math -I../../src/kernel/mesh 
-I../../src/kernel/nls -I../../src/kernel/ode -I../../src/kernel/pde 
-I../../src/kernel/quadrature -I../../src/kernel/parameter 
-I../../src/kernel/log -I/data/alireza/petsc-2.3.1-p11 
-I/data/alireza/petsc-2.3.1-p11/bmake/linux-gnu-c-real-debug 
-I/data/alireza/petsc-2.3.1-p11/include 
-I/data/alireza/petsc-2.3.1-p11/externalpackages/mpich2-1.0.3/linux-gnu-c-real-debug/include 
-I/usr/local/mpich/default/include -I/usr/include/libxml2 
-I../../src/modules/elasticity -I../../src/modules/elasticity-updated 
-I../../src/modules/convdiff -I../../src/modules/navierstokes 
-I../../src/modules/poisson -I../../src/modules/stokes 
-I../../src/modules/heat -I../../src/kernel/common 
-I../../src/kernel/fem -I../../src/kernel/form 
-I../../src/kernel/function -I../../src/kernel/io -I../../src/kernel/la 
-I../../src/kernel/main -I../../src/kernel/math -I../../src/kernel/mesh 
-I../../src/kernel/nls -I../../src/kernel/ode -I../../src/kernel/pde 
-I../../src/kernel/quadrature -I../../src/kernel/parameter 
-I../../src/kernel/log -I/data/alireza/petsc-2.3.1-p11 
-I/data/alireza/petsc-2.3.1-p11/bmake/linux-gnu-c-real-debug 
-I/data/alireza/petsc-2.3.1-p11/include 
-I/data/alireza/petsc-2.3.1-p11/externalpackages/mpich2-1.0.3/linux-gnu-c-real-debug/include 
-I/usr/local/mpich/default/include -I/usr/include/libxml2 
-I../../src/modules/

which is right and when I do from another folder:

-I/usr/local/include -I../../src/kernel/common -I../../src/kernel/fem 
-I../../src/kernel/form -I../../src/kernel/function 
-I../../src/kernel/io -I../../src/kernel/la -I../../src/kernel/main 
-I../../src/kernel/math -I../../src/kernel/mesh -I../../src/kernel/nls 
-I../../src/kernel/ode -I../../src/kernel/pde 
-I../../src/kernel/quadrature -I../../src/kernel/parameter 
-I../../src/kernel/log -I/data/daan/FeNics/petsc-2.3.1-p2 
-I/data/daan/FeNics/petsc-2.3.1-p2/bmake/linux-gnu-intel 
-I/data/daan/FeNics/petsc-2.3.1-p2/include 
-I/data/daan/FeNics/petsc-2.3.1-p2/include/mpiuni 
-I/usr/local/mpich/default/include -I/usr/include/libxml2 
-I../../src/modules/elasticity -I../../src/modules/elasticity-updated 
-I../../src/modules/convdiff -I../../src/modules/navierstokes 
-I../../src/modules/poisson -I../../src/modules/stokes 
-I../../src/modules/heat -I../../src/kernel/common 
-I../../src/kernel/fem -I../../src/kernel/form 
-I../../src/kernel/function -I../../src/kernel/io -I../../src/kernel/la 
-I../../src/kernel/main -I../../src/kernel/math -I../../src/kernel/mesh 
-I../../src/kernel/nls -I../../src/kernel/ode -I../../src/kernel/pde 
-I../../src/kernel/quadrature -I../../src/kernel/parameter 
-I../../src/kernel/log -I/data/daan/FeNics/petsc-2.3.1-p2 
-I/data/daan/FeNics/petsc-2.3.1-p2/bmake/linux-gnu-intel 
-I/data/daan/FeNics/petsc-2.3.1-p2/include 
-I/data/daan/FeNics/petsc-2.3.1-p2/include/mpiuni 
-I/usr/local/mpich/default/include -I/usr/include/libxml2 
-I../../src/modules/

Which is daan!!

echo $PATH returns:

[alireza@master src]$ echo $PATH
data/alireza/dolfin0.6.1/local/bin:/opt/intel/intel_idb_80/bin:/opt/intel/intel_fc_80/bin:/opt/intel/intel_cc_80/bin:/usr/local/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/local/aspen/bin:/usr/local/mpich/default/bin:/usr/local/openpbs/bin:/opt/compro/bin:/data/alireza/bin

dolfin-config is in the first directory: 
data/alireza/dolfin0.6.1/local/bin


and when I did dolfin-config --cflags from /src/config from data/alireza/dolfin0.6.1/local/bin
it returns:
[alireza@master bin]$ ./dolfin-config --cflags
-I/data/alireza/dolfin-0.6.1/local/include -I../../src/kernel/common -I../../src/kernel/fem -I../../src/kernel/form -I../../src/kernel/function -I../../src/kernel/io -I../../src/kernel/la -I../../src/kernel/main -I../../src/kernel/math -I../../src/kernel/mesh -I../../src/kernel/nls -I../../src/kernel/ode -I../../src/kernel/pde -I../../src/kernel/quadrature -I../../src/kernel/parameter -I../../src/kernel/log -I/data/alireza/petsc-2.3.1-p11 -I/data/alireza/petsc-2.3.1-p11/bmake/linux-gnu-c-real-debug -I/data/alireza/petsc-2.3.1-p11/include -I/data/alireza/petsc-2.3.1-p11/externalpackages/mpich2-1.0.3/linux-gnu-c-real-debug/include -I/usr/local/mpich/default/include -I/usr/include/libxml2 -I../../src/modules/elasticity -I../../src/modules/elasticity-updated -I../../src/modules/convdiff -I../../src/modules/navierstokes -I../../src/modules/poisson -I../../src/modules/stokes -I../../src/modules/heat -I../../src/kernel/common -I../../src/kernel/fem -I../../src/kernel/form -I../../s
rc/kernel/function -I../../src/kernel/io -I../../src/kernel/la -I../../src/kernel/main -I../../src/kernel/math -I../../src/kernel/mesh -I../../src/kernel/nls -I../../src/kernel/ode -I../../src/kernel/pde -I../../src/kernel/quadrature -I../../src/kernel/parameter -I../../src/kernel/log -I/data/alireza/petsc-2.3.1-p11 -I/data/alireza/petsc-2.3.1-p11/bmake/linux-gnu-c-real-debug -I/data/alireza/petsc-2.3.1-p11/include -I/data/alireza/petsc-2.3.1-p11/externalpackages/mpich2-1.0.3/linux-gnu-c-real-debug/include -I/usr/local/mpich/default/include -I/usr/include/libxml2 -I../../src/modules/

which seems right
May be it is runs Daan's DOLFIN instead of mine!!!


Alireza







Anders Logg wrote:

That looks right. It says alireza and not daan.

Then I would be *very* surprised if dolfin-config is not correct also.

Check the dolfin-config (in the same directory). It should contain the
correct paths.

Then runnin dolfin-config --cflags must also return the correct path.
Go to src/config and do

   ./dolfin-config --cflags

I'd be very surprised if it doesn't return the correct path.

Then go to another directory and do

   ./dolfin-config --cflags

If that does not also return the correct path, then the dolfin-config
in your PATH must be the wrong dolfin-config.

Maybe dolfin-config has been installed somewhere else in your PATH?

Type

   echo $PATH

then check if dolfin-config is in any of the directories.

/Anders