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Re: [HG dolfin] Use DofMap in FEM to get dof mapping and to compute number of nonzeroes per matrix row. This gives big memory savings for some problems. For /src/demo/pde/elasticity memory use was approx. 600mb, now 200mb.

 

We need to think a bit about how a discrete Function is represented. At the moment a Function is defined by a mesh, a finite element and a vector, and the finite element provides a simple dof mapping. What we need is that a Function is defined by a DofMap and a vector, where the DofMap is associated with a vector and a finite element.

Any ideas?

Garth


Anders Logg wrote:
Very nice!

/Anders


        On Tue, Dec 05, 2006 at 09:51:02PM +0100, DOLFIN wrote:
One or more new changesets pushed to the primary DOLFIN repository.
A short summary of the last three changesets is included below.

changeset:   2500:81caeea1ec9f7ee49058dcacc0204bd3dfaa11d4
tag:         tip
user:        "Garth N. Wells <g.n.wells@xxxxxxxxxx>"
date:        Tue Dec 05 21:50:43 2006 +0100
files:       src/kernel/fem/FEM.cpp src/kernel/fem/dolfin/FEM.h
description:
Use DofMap in FEM to get dof mapping and to compute number of nonzeroes per matrix row. This gives big memory savings for some problems. For /src/demo/pde/elasticity memory use was approx. 600mb, now 200mb.

The sparsity pattern could be used when intialising uBlas matrices which will give a major speed up.


changeset:   2499:a9b743b159ccc730ba463751ec018a440b00480d
parent:      2497:a9be37db26e6668c6c83ac27423d478ef1b79e93
parent:      2498:2d0904d34b61e8a1f9132326bd74851e5b94946e
user:        "Garth N. Wells <g.n.wells@xxxxxxxxxx>"
date:        Tue Dec 05 21:30:50 2006 +0100
files: description:
merge


changeset:   2498:2d0904d34b61e8a1f9132326bd74851e5b94946e
parent:      2491:5d1dc976cd3c2897f43db2b60e9ca405928c2dba
user:        "Garth N. Wells <g.n.wells@xxxxxxxxxx>"
date:        Tue Dec 05 21:29:35 2006 +0100
files:       src/kernel/fem/DofMap.cpp src/kernel/fem/dolfin/DofMap.h
description:
Fix memory leak in DofMap.


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