dolfin team mailing list archive

[dolfin@xxxxxxxxxx (DOLFIN)]

This is an automated message from the FEniCS compile bot.
Compilation failed with configure options --enable-debug --disable-petsc.
Revision number and compilation log follow below.

changeset:   3341:ceffee3abe59
tag:         tip
parent:      3339:4a841a3f0ac1
parent:      3340:b4960217b95e
user:        "Garth N. Wells <g.n.wells@xxxxxxxxxx>"
date:        Mon Aug 13 11:37:32 2007 +0200
summary:     merge.


[snip]
make[2]: Entering directory `/home/dolfin/tmp/cron/compilebot/dolfin/src/lib'
/bin/sh ../../libtool --tag=CC --mode=link mpicc  -g -O2  -L/usr/lib/python2.4/config  -lpthread -ldl  -lutil -o libdolfin.la -rpath /home/dolfin/tmp/cron/compilebot/dolfin/local/lib -L/usr/lib -lxml2      ../../src/kernel/common/*.lo  ../../src/kernel/elements/*.lo  ../../src/kernel/fem/*.lo  ../../src/kernel/function/*.lo  ../../src/kernel/graph/*.lo  ../../src/kernel/io/*.lo  ../../src/kernel/la/*.lo  ../../src/kernel/main/*.lo  ../../src/kernel/math/*.lo  ../../src/kernel/mesh/*.lo  ../../src/kernel/mf/*.lo  ../../src/kernel/nls/*.lo  ../../src/kernel/ode/*.lo  ../../src/kernel/pde/*.lo  ../../src/kernel/quadrature/*.lo  ../../src/kernel/parameter/*.lo  ../../src/kernel/log/*.lo  ../../src/kernel/plot/*.lo  
mkdir .libs
mpicc -shared  ../../src/kernel/common/.libs/TimeDependent.o ../../src/kernel/common/.libs/timing.o ../../src/kernel/common/.libs/utils.o ../../src/kernel/common/.libs/Variable.o ../../src/kernel/elements/.libs/ElementLibrary.o ../../src/kernel/fem/.libs/assemble.o ../../src/kernel/fem/.libs/Assembler.o ../../src/kernel/fem/.libs/BoundaryCondition.o ../../src/kernel/fem/.libs/DirichletBC.o ../../src/kernel/fem/.libs/DofMap.o ../../src/kernel/fem/.libs/DofMapSet.o ../../src/kernel/fem/.libs/PeriodicBC.o ../../src/kernel/fem/.libs/SparsityPatternBuilder.o ../../src/kernel/fem/.libs/SubSystem.o ../../src/kernel/fem/.libs/UFC.o ../../src/kernel/function/.libs/ConstantFunction.o ../../src/kernel/function/.libs/DiscreteFunction.o ../../src/kernel/function/.libs/Function.o ../../src/kernel/function/.libs/UserFunction.o ../../src/kernel/graph/.libs/DirectedClique.o ../../src/kernel/graph/.libs/GraphEditor.o ../../src/kernel/graph/.libs/Graph.o ../../src/kernel/graph/.libs/GraphPartition.o ../../src/kernel/graph/.libs/UndirectedClique.o ../../src/kernel/io/.libs/File.o ../../src/kernel/io/.libs/GenericFile.o ../../src/kernel/io/.libs/MatlabFile.o ../../src/kernel/io/.libs/MFile.o ../../src/kernel/io/.libs/OctaveFile.o ../../src/kernel/io/.libs/OpenDXFile.o ../../src/kernel/io/.libs/PythonFile.o ../../src/kernel/io/.libs/VTKFile.o ../../src/kernel/io/.libs/XMLBLASFormData.o ../../src/kernel/io/.libs/XMLDofMap.o ../../src/kernel/io/.libs/XMLFile.o ../../src/kernel/io/.libs/XMLFiniteElement.o ../../src/kernel/io/.libs/XMLFunction.o ../../src/kernel/io/.libs/XMLGraph.o ../../src/kernel/io/.libs/XMLMatrix.o ../../src/kernel/io/.libs/XMLMeshFunction.o ../../src/kernel/io/.libs/XMLMesh.o ../../src/kernel/io/.libs/XMLObject.o ../../src/kernel/io/.libs/XMLParameterList.o ../../src/kernel/io/.libs/XMLVector.o ../../src/kernel/la/.libs/GMRES.o ../../src/kernel/la/.libs/LU.o ../../src/kernel/la/.libs/PETScKrylovMatrix.o ../../src/kernel/la/.libs/PETScKrylovSolver.o ../../src/kernel/la/.libs/PETScLUSolver.o ../../src/kernel/la/.libs/PETScManager.o ../../src/kernel/la/.libs/PETScMatrix.o ../../src/kernel/la/.libs/PETScPreconditioner.o ../../src/kernel/la/.libs/PETScVector.o ../../src/kernel/la/.libs/SLEPcEigenvalueSolver.o ../../src/kernel/la/.libs/solve.o ../../src/kernel/la/.libs/SparsityPattern.o ../../src/kernel/la/.libs/uBlasDummyPreconditioner.o ../../src/kernel/la/.libs/uBlasILUPreconditioner.o ../../src/kernel/la/.libs/uBlasKrylovMatrix.o ../../src/kernel/la/.libs/uBlasKrylovSolver.o ../../src/kernel/la/.libs/uBlasLUSolver.o ../../src/kernel/la/.libs/uBlasVector.o ../../src/kernel/main/.libs/init.o ../../src/kernel/math/.libs/basic.o ../../src/kernel/math/.libs/Lagrange.o ../../src/kernel/math/.libs/Legendre.o ../../src/kernel/mesh/.libs/BoundaryComputation.o ../../src/kernel/mesh/.libs/BoundaryMesh.o ../../src/kernel/mesh/.libs/Cell.o ../../src/kernel/mesh/.libs/CellType.o ../../src/kernel/mesh/.libs/Edge.o ../../src/kernel/mesh/.libs/Face.o ../../src/kernel/mesh/.libs/Facet.o ../../src/kernel/mesh/.libs/GeometricPredicates.o ../../src/kernel/mesh/.libs/GTSInterface.o ../../src/kernel/mesh/.libs/IntersectionDetector.o ../../src/kernel/mesh/.libs/Interval.o ../../src/kernel/mesh/.libs/LocalMeshCoarsening.o ../../src/kernel/mesh/.libs/LocalMeshRefinement.o ../../src/kernel/mesh/.libs/MeshConnectivity.o ../../src/kernel/mesh/.libs/MeshData.o ../../src/kernel/mesh/.libs/MeshEditor.o ../../src/kernel/mesh/.libs/MeshEntityIterator.o ../../src/kernel/mesh/.libs/MeshEntity.o ../../src/kernel/mesh/.libs/MeshGeometry.o ../../src/kernel/mesh/.libs/MeshHierarchyAlgorithms.o ../../src/kernel/mesh/.libs/MeshHierarchy.o ../../src/kernel/mesh/.libs/Mesh.o ../../src/kernel/mesh/.libs/MeshOrdering.o ../../src/kernel/mesh/.libs/MeshPartition.o ../../src/kernel/mesh/.libs/MeshTopology.o ../../src/kernel/mesh/.libs/MPIMeshCommunicator.o ../../src/kernel/mesh/.libs/Point.o ../../src/kernel/mesh/.libs/SubDomain.o ../../src/kernel/mesh/.libs/Tetrahedron.o ../../src/kernel/mesh/.libs/TopologyComputation.o ../../src/kernel/mesh/.libs/Triangle.o ../../src/kernel/mesh/.libs/UniformMeshRefinement.o ../../src/kernel/mesh/.libs/UnitCube.o ../../src/kernel/mesh/.libs/UnitSquare.o ../../src/kernel/mesh/.libs/Vertex.o ../../src/kernel/mf/.libs/MatrixFactory.o ../../src/kernel/nls/.libs/NewtonSolver.o ../../src/kernel/nls/.libs/NonlinearProblem.o ../../src/kernel/ode/.libs/Adaptivity.o ../../src/kernel/ode/.libs/Alloc.o ../../src/kernel/ode/.libs/cGqMethod.o ../../src/kernel/ode/.libs/ComplexODE.o ../../src/kernel/ode/.libs/Controller.o ../../src/kernel/ode/.libs/Dependencies.o ../../src/kernel/ode/.libs/dGqMethod.o ../../src/kernel/ode/.libs/Dual.o ../../src/kernel/ode/.libs/HomotopyJacobian.o ../../src/kernel/ode/.libs/Homotopy.o ../../src/kernel/ode/.libs/HomotopyODE.o ../../src/kernel/ode/.libs/Method.o ../../src/kernel/ode/.libs/MonoAdaptiveFixedPointSolver.o ../../src/kernel/ode/.libs/MonoAdaptiveJacobian.o ../../src/kernel/ode/.libs/MonoAdaptiveNewtonSolver.o ../../src/kernel/ode/.libs/MonoAdaptiveTimeSlab.o ../../src/kernel/ode/.libs/MonoAdaptivity.o ../../src/kernel/ode/.libs/MultiAdaptiveFixedPointSolver.o ../../src/kernel/ode/.libs/MultiAdaptiveJacobian.o ../../src/kernel/ode/.libs/MultiAdaptiveNewtonSolver.o ../../src/kernel/ode/.libs/MultiAdaptivePreconditioner.o ../../src/kernel/ode/.libs/MultiAdaptiveTimeSlab.o ../../src/kernel/ode/.libs/MultiAdaptivity.o ../../src/kernel/ode/.libs/ODE.o ../../src/kernel/ode/.libs/ODESolver.o ../../src/kernel/ode/.libs/Partition.o ../../src/kernel/ode/.libs/ReducedModel.o ../../src/kernel/ode/.libs/Sample.o ../../src/kernel/ode/.libs/TimeSlabJacobian.o ../../src/kernel/ode/.libs/TimeSlab.o ../../src/kernel/ode/.libs/TimeSlabSolver.o ../../src/kernel/ode/.libs/TimeStepper.o ../../src/kernel/ode/.libs/UpdatedMultiAdaptiveJacobian.o ../../src/kernel/pde/.libs/LinearPDE.o ../../src/kernel/pde/.libs/NonlinearPDE.o ../../src/kernel/quadrature/.libs/GaussianQuadrature.o ../../src/kernel/quadrature/.libs/GaussQuadrature.o ../../src/kernel/quadrature/.libs/LobattoQuadrature.o ../../src/kernel/quadrature/.libs/Quadrature.o ../../src/kernel/quadrature/.libs/RadauQuadrature.o ../../src/kernel/parameter/.libs/ParameterList.o ../../src/kernel/parameter/.libs/Parameter.o ../../src/kernel/parameter/.libs/parameters.o ../../src/kernel/parameter/.libs/ParameterSystem.o ../../src/kernel/parameter/.libs/ParameterValue.o ../../src/kernel/parameter/.libs/Parametrized.o ../../src/kernel/log/.libs/Event.o ../../src/kernel/log/.libs/Logger.o ../../src/kernel/log/.libs/log.o ../../src/kernel/log/.libs/LogManager.o ../../src/kernel/log/.libs/LogStream.o ../../src/kernel/log/.libs/Progress.o ../../src/kernel/plot/.libs/plot.o  -L/usr/lib/python2.4/config -lpthread -ldl -lutil -L/usr/lib /usr/lib/libxml2.so  -Wl,-soname -Wl,libdolfin.so.0 -o .libs/libdolfin.so.0.0.0
(cd .libs && rm -f libdolfin.so.0 && ln -s libdolfin.so.0.0.0 libdolfin.so.0)
(cd .libs && rm -f libdolfin.so && ln -s libdolfin.so.0.0.0 libdolfin.so)
ar cru .libs/libdolfin.a  ../../src/kernel/common/TimeDependent.o ../../src/kernel/common/timing.o ../../src/kernel/common/utils.o ../../src/kernel/common/Variable.o ../../src/kernel/elements/ElementLibrary.o ../../src/kernel/fem/assemble.o ../../src/kernel/fem/Assembler.o ../../src/kernel/fem/BoundaryCondition.o ../../src/kernel/fem/DirichletBC.o ../../src/kernel/fem/DofMap.o ../../src/kernel/fem/DofMapSet.o ../../src/kernel/fem/PeriodicBC.o ../../src/kernel/fem/SparsityPatternBuilder.o ../../src/kernel/fem/SubSystem.o ../../src/kernel/fem/UFC.o ../../src/kernel/function/ConstantFunction.o ../../src/kernel/function/DiscreteFunction.o ../../src/kernel/function/Function.o ../../src/kernel/function/UserFunction.o ../../src/kernel/graph/DirectedClique.o ../../src/kernel/graph/GraphEditor.o ../../src/kernel/graph/Graph.o ../../src/kernel/graph/GraphPartition.o ../../src/kernel/graph/UndirectedClique.o ../../src/kernel/io/File.o ../../src/kernel/io/GenericFile.o ../../src/kernel/io/MatlabFile.o ../../src/kernel/io/MFile.o ../../src/kernel/io/OctaveFile.o ../../src/kernel/io/OpenDXFile.o ../../src/kernel/io/PythonFile.o ../../src/kernel/io/VTKFile.o ../../src/kernel/io/XMLBLASFormData.o ../../src/kernel/io/XMLDofMap.o ../../src/kernel/io/XMLFile.o ../../src/kernel/io/XMLFiniteElement.o ../../src/kernel/io/XMLFunction.o ../../src/kernel/io/XMLGraph.o ../../src/kernel/io/XMLMatrix.o ../../src/kernel/io/XMLMeshFunction.o ../../src/kernel/io/XMLMesh.o ../../src/kernel/io/XMLObject.o ../../src/kernel/io/XMLParameterList.o ../../src/kernel/io/XMLVector.o ../../src/kernel/la/GMRES.o ../../src/kernel/la/LU.o ../../src/kernel/la/PETScKrylovMatrix.o ../../src/kernel/la/PETScKrylovSolver.o ../../src/kernel/la/PETScLUSolver.o ../../src/kernel/la/PETScManager.o ../../src/kernel/la/PETScMatrix.o ../../src/kernel/la/PETScPreconditioner.o ../../src/kernel/la/PETScVector.o ../../src/kernel/la/SLEPcEigenvalueSolver.o ../../src/kernel/la/solve.o ../../src/kernel/la/SparsityPattern.o ../../src/kernel/la/uBlasDummyPreconditioner.o ../../src/kernel/la/uBlasILUPreconditioner.o ../../src/kernel/la/uBlasKrylovMatrix.o ../../src/kernel/la/uBlasKrylovSolver.o ../../src/kernel/la/uBlasLUSolver.o ../../src/kernel/la/uBlasVector.o ../../src/kernel/main/init.o ../../src/kernel/math/basic.o ../../src/kernel/math/Lagrange.o ../../src/kernel/math/Legendre.o ../../src/kernel/mesh/BoundaryComputation.o ../../src/kernel/mesh/BoundaryMesh.o ../../src/kernel/mesh/Cell.o ../../src/kernel/mesh/CellType.o ../../src/kernel/mesh/Edge.o ../../src/kernel/mesh/Face.o ../../src/kernel/mesh/Facet.o ../../src/kernel/mesh/GeometricPredicates.o ../../src/kernel/mesh/GTSInterface.o ../../src/kernel/mesh/IntersectionDetector.o ../../src/kernel/mesh/Interval.o ../../src/kernel/mesh/LocalMeshCoarsening.o ../../src/kernel/mesh/LocalMeshRefinement.o ../../src/kernel/mesh/MeshConnectivity.o ../../src/kernel/mesh/MeshData.o ../../src/kernel/mesh/MeshEditor.o ../../src/kernel/mesh/MeshEntityIterator.o ../../src/kernel/mesh/MeshEntity.o ../../src/kernel/mesh/MeshGeometry.o ../../src/kernel/mesh/MeshHierarchyAlgorithms.o ../../src/kernel/mesh/MeshHierarchy.o ../../src/kernel/mesh/Mesh.o ../../src/kernel/mesh/MeshOrdering.o ../../src/kernel/mesh/MeshPartition.o ../../src/kernel/mesh/MeshTopology.o ../../src/kernel/mesh/MPIMeshCommunicator.o ../../src/kernel/mesh/Point.o ../../src/kernel/mesh/SubDomain.o ../../src/kernel/mesh/Tetrahedron.o ../../src/kernel/mesh/TopologyComputation.o ../../src/kernel/mesh/Triangle.o ../../src/kernel/mesh/UniformMeshRefinement.o ../../src/kernel/mesh/UnitCube.o ../../src/kernel/mesh/UnitSquare.o ../../src/kernel/mesh/Vertex.o ../../src/kernel/mf/MatrixFactory.o ../../src/kernel/nls/NewtonSolver.o ../../src/kernel/nls/NonlinearProblem.o ../../src/kernel/ode/Adaptivity.o ../../src/kernel/ode/Alloc.o ../../src/kernel/ode/cGqMethod.o ../../src/kernel/ode/ComplexODE.o ../../src/kernel/ode/Controller.o ../../src/kernel/ode/Dependencies.o ../../src/kernel/ode/dGqMethod.o ../../src/kernel/ode/Dual.o ../../src/kernel/ode/HomotopyJacobian.o ../../src/kernel/ode/Homotopy.o ../../src/kernel/ode/HomotopyODE.o ../../src/kernel/ode/Method.o ../../src/kernel/ode/MonoAdaptiveFixedPointSolver.o ../../src/kernel/ode/MonoAdaptiveJacobian.o ../../src/kernel/ode/MonoAdaptiveNewtonSolver.o ../../src/kernel/ode/MonoAdaptiveTimeSlab.o ../../src/kernel/ode/MonoAdaptivity.o ../../src/kernel/ode/MultiAdaptiveFixedPointSolver.o ../../src/kernel/ode/MultiAdaptiveJacobian.o ../../src/kernel/ode/MultiAdaptiveNewtonSolver.o ../../src/kernel/ode/MultiAdaptivePreconditioner.o ../../src/kernel/ode/MultiAdaptiveTimeSlab.o ../../src/kernel/ode/MultiAdaptivity.o ../../src/kernel/ode/ODE.o ../../src/kernel/ode/ODESolver.o ../../src/kernel/ode/Partition.o ../../src/kernel/ode/ReducedModel.o ../../src/kernel/ode/Sample.o ../../src/kernel/ode/TimeSlabJacobian.o ../../src/kernel/ode/TimeSlab.o ../../src/kernel/ode/TimeSlabSolver.o ../../src/kernel/ode/TimeStepper.o ../../src/kernel/ode/UpdatedMultiAdaptiveJacobian.o ../../src/kernel/pde/LinearPDE.o ../../src/kernel/pde/NonlinearPDE.o ../../src/kernel/quadrature/GaussianQuadrature.o ../../src/kernel/quadrature/GaussQuadrature.o ../../src/kernel/quadrature/LobattoQuadrature.o ../../src/kernel/quadrature/Quadrature.o ../../src/kernel/quadrature/RadauQuadrature.o ../../src/kernel/parameter/ParameterList.o ../../src/kernel/parameter/Parameter.o ../../src/kernel/parameter/parameters.o ../../src/kernel/parameter/ParameterSystem.o ../../src/kernel/parameter/ParameterValue.o ../../src/kernel/parameter/Parametrized.o ../../src/kernel/log/Event.o ../../src/kernel/log/Logger.o ../../src/kernel/log/log.o ../../src/kernel/log/LogManager.o ../../src/kernel/log/LogStream.o ../../src/kernel/log/Progress.o ../../src/kernel/plot/plot.o
ranlib .libs/libdolfin.a
creating libdolfin.la
(cd .libs && rm -f libdolfin.la && ln -s ../libdolfin.la libdolfin.la)
make[2]: Leaving directory `/home/dolfin/tmp/cron/compilebot/dolfin/src/lib'
Making all in pydolfin
make[2]: Entering directory `/home/dolfin/tmp/cron/compilebot/dolfin/src/pydolfin'
/usr/bin/swig -c++ -python -ignoremissing -nodefaultctor -nodefaultdtor -dirprot -Werror `pkg-config --cflags ufc-1`  -I../../src/kernel/common -I../../src/kernel/elements -I../../src/kernel/fem -I../../src/kernel/function -I../../src/kernel/graph -I../../src/kernel/io -I../../src/kernel/la -I../../src/kernel/main -I../../src/kernel/math -I../../src/kernel/mesh -I../../src/kernel/mf -I../../src/kernel/nls -I../../src/kernel/ode -I../../src/kernel/pde -I../../src/kernel/quadrature -I../../src/kernel/parameter -I../../src/kernel/log -I../../src/kernel/plot  -DDEBUG -DNDEBUG -o dolfin_wrap.cpp dolfin.i
dolfin.i:50: Warning(201): Unable to find 'ufc.h'
make[2]: *** [dolfin_wrap.cpp] Error 1
make[2]: Leaving directory `/home/dolfin/tmp/cron/compilebot/dolfin/src/pydolfin'
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory `/home/dolfin/tmp/cron/compilebot/dolfin/src'
make: *** [all-recursive] Error 1