dolfin team mailing list archive

["Johannes Ring" <johannr@xxxxxxxxx>]

On Thu, September 18, 2008 19:43, Anders Logg wrote:
> On Thu, Sep 18, 2008 at 06:52:30PM +0200, Johannes Ring wrote:
>> On Thu, September 18, 2008 18:35, Anders Logg wrote:
>> > We need to add a test/pkgconfig-generator for ParMETIS.
>> >
>> > I can build the test program in sandbox/passembly but I need to add
>> >
>> >   customCxxFlags=-DHAS_PARMETIS=1
>> >
>> > to scons when building DOLFIN and then manually add
>> >
>> >   -lparmetis -lmetis
>> >
>> > when linking the demo.
>> >
>> > Can someone who knows the build system better add this?
>>
>> I can do that.
>
> Thanks.
>
>> Do you use the libparmetis-dev package that comes with
>> Ubuntu or do you build ParMETIS yourself?
>
> I use the Ubuntu package.

I have the pkg-config generator for ParMETIS ready but building DOLFIN
fails with the following error message:

mpic++ -o dolfin/mesh/MeshPartition.os -c -Wall -pipe -ansi -DDEBUG -g
-Werror -DNDEBUG -O2 -DHAS_MPI=1 -DMPICH_IGNORE_CXX_SEEK
-DPACKAGE_VERSION=\"0.8.0\" -DHAS_PETSC=1 -DHAS_SLEPC=1 -DHAS_SCOTCH=1
-DHAS_UMFPACK=1 -DHAS_GTS=1 -DHAS_TRILINOS=1 -DHAS_CHOLMOD=1 -DHAS_MTL4=1
-DHAS_PARMETIS=1 -fPIC -I. -I/usr/local/include -I/usr/include/libxml2
-I/usr/lib/petsc/bmake/linux-gnu-c-opt -I/usr/lib/petsc/include
-I/usr/lib/openmpi/include -I/usr/lib/openmpi/lib -Idolfin
-I/home/johannr/src/slepc-2.3.3 -I/home/johannr/src/slepc-2.3.3/include
-I/usr/lib/petsc/bmake/linux-gnu-c-opt -I/usr/lib/petsc/include
-I/usr/lib/openmpi/include -I/usr/lib/openmpi/lib -Idolfin
-I/home/johannr/src/scotch_5.0/bin -I/usr/include/suitesparse
-I/usr/include/glib-2.0 -I/usr/lib/glib-2.0/include
-I/home/johannr/src/trilinos-8.0.3/local/include
-I/usr/include/suitesparse -I/home/johannr/src/svn/mtl4
dolfin/mesh/MeshPartition.cpp
dolfin/mesh/MeshPartition.cpp: In static member function ‘static void
dolfin::MeshPartition::partitionGeom(dolfin::Mesh&,
dolfin::MeshFunction<unsigned int>&)’:
dolfin/mesh/MeshPartition.cpp:102: error: ‘idxtype’ was not declared in
this scope
dolfin/mesh/MeshPartition.cpp:102: error: ‘vtxdist’ was not declared in
this scope
dolfin/mesh/MeshPartition.cpp:102: error: expected type-specifier before
‘idxtype’
dolfin/mesh/MeshPartition.cpp:102: error: expected `;' before ‘idxtype’
dolfin/mesh/MeshPartition.cpp:103: error: expected type-specifier before
‘idxtype’
dolfin/mesh/MeshPartition.cpp:103: error: expected `>' before ‘idxtype’
dolfin/mesh/MeshPartition.cpp:103: error: expected `(' before ‘idxtype’
dolfin/mesh/MeshPartition.cpp:103: error: expected `)' before ‘;’ token
dolfin/mesh/MeshPartition.cpp:117: error: expected `;' before ‘gdim’
dolfin/mesh/MeshPartition.cpp:118: error: ‘part’ was not declared in this
scope
dolfin/mesh/MeshPartition.cpp:118: error: expected type-specifier before
‘idxtype’
dolfin/mesh/MeshPartition.cpp:118: error: expected `;' before ‘idxtype’
dolfin/mesh/MeshPartition.cpp:119: error: ‘gdim’ was not declared in this
scope
dolfin/mesh/MeshPartition.cpp:134: error: ‘ParMETIS_V3_PartGeom’ was not
declared in this scope
dolfin/mesh/MeshPartition.cpp:143: error: type ‘<type error>’ argument
given to ‘delete’, expected pointer
dolfin/mesh/MeshPartition.cpp:144: error: type ‘<type error>’ argument
given to ‘delete’, expected pointer
scons: *** [dolfin/mesh/MeshPartition.os] Error 1
scons: building terminated because of errors.

Any ideas?

Johannes

> --
> Anders
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