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Re: Problems with repository

 

I recently updated dolfin YESTERDAY (thursday, sept. 18th). I just ran hg verify and got:

walker@box227 ~/FENICS/dolfin
$ hg verify
checking changesets
checking manifests
crosschecking files in changesets and manifests
checking files
demo/pde/dg/poisson/python/demo.py.orig@4147: empty or missing copy source revlog demo/pde/dg/python/demo.py.orig:000000000000 src/demo/mesh/partitioning/cpp/dolfin-mesh-partition-demo@3223: copy source revision is nullid src/demo/mesh/partitioning/dolfin-mesh-partition-demo:000000000000 src/demo/mesh/partitioning/cpp/dolfin-mesh-partition-demo@3242: copy source revision is nullid src/demo/mesh/partitioning/dolfin-mesh-partition-demo:000000000000 src/demo/mesh/partitioning/cpp/test.py@3223: copy source revision is nullid src/demo/mesh/partitioning/test.py:000000000000
4876 files, 4783 changesets, 42084 total revisions
4 integrity errors encountered!
(first damaged changeset appears to be 3223)

I have not updated dolfin with the new stuff from today. I can do that if that would be helpful.

- Shawn

On Fri, 19 Sep 2008, Johan Hake wrote:

On Friday 19 September 2008 14:31:25 Johan Hake wrote:
On Friday 19 September 2008 13:58:14 Ola Skavhaug wrote:
Anders Logg skrev den 19/09-2008 følgende:
If I run hg verify on the repository, I get

checking changesets
checking manifests
crosschecking files in changesets and manifests
checking files
 doc/manual/dolfin-user-manual.pdf@2180: unpacking 0cfaffa5665f: Error
 -3 while decompressing data: incorrect data check
 doc/manual/dolfin-user-manual.pdf@2181: unpacking 0c1a7c863c14: Error
 -3 while decompressing data: incorrect data check
 doc/manual/dolfin-user-manual.pdf@2183: unpacking 0945fe8b62a5: Error
 -3 while decompressing data: incorrect data check
 dolfin/graph/GraphPartition.cpp@3656: checking rename of
 f8fc00fbec5f: data/src/kernel/graph/GraphPartition.cpp.i: no node
 49bdb952d2af811ab6fe897b3ad838a717a5aafc
 src/kernel/graph/GraphPartition.cpp@?: index contains -514678021
 extra bytes
 src/kernel/graph/GraphPartition.cpp@3002: unpacking 2808e8d20b39:
 integrity check failed on
 data/src/kernel/graph/GraphPartition.cpp.d:5
 src/kernel/graph/GraphPartition.cpp@?: rev 6 points to unexpected
 changeset 11
 (expected 3009)
 src/kernel/graph/GraphPartition.cpp@?: ff3ad1d2ffbb not in manifests
 src/kernel/graph/GraphPartition.cpp@?: unpacking ff3ad1d2ffbb:
 incompatible revision flag b900
 src/kernel/graph/GraphPartition.cpp@?: checking parents of
 ff3ad1d2ffbb: list index out of range
 src/kernel/graph/GraphPartition.cpp@?: checking rename of
 ff3ad1d2ffbb: list index out of range
 src/kernel/graph/GraphPartition.cpp@?: rev 7 point to nonexistent
 changeset 1820866133
 (expected 3009)
 src/kernel/graph/GraphPartition.cpp@?: 148482c41836 not in manifests
 src/kernel/graph/GraphPartition.cpp@?: unpacking 148482c41836:
 incompatible revision flag 4114
 src/kernel/graph/GraphPartition.cpp@?: checking parents of
 148482c41836: list index out of range
 src/kernel/graph/GraphPartition.cpp@?: checking rename of
 148482c41836: list index out of range
 src/kernel/graph/GraphPartition.cpp@3009: 3ad1d2ffbb05 in manifests
 not found
 src/kernel/graph/GraphPartition.cpp@3034: fb94ecb0aa58 in manifests
 not found
 src/kernel/graph/GraphPartition.cpp@3036: 674e28207dcf in manifests
 not found
 src/kernel/graph/GraphPartition.cpp@3045: 7d9c717eb332 in manifests
 not found
 src/kernel/graph/GraphPartition.cpp@3085: 025f312f7c22 in manifests
 not found
 src/kernel/graph/GraphPartition.cpp@3145: ba5051dff67d in manifests
 not found
 src/kernel/graph/GraphPartition.cpp@3146: 7196ccf07616 in manifests
 not found
 src/kernel/graph/GraphPartition.cpp@3148: af020bb3ace1 in manifests
 not found
 src/kernel/graph/GraphPartition.cpp@3190: c95515e95a3e in manifests
 not found
 src/kernel/graph/GraphPartition.cpp@3222: c563075bf5b8 in manifests
 not found
 src/kernel/graph/GraphPartition.cpp@3255: 49bdb952d2af in manifests
 not found
4877 files, 4786 changesets, 42087 total revisions
2 warnings encountered!
27 integrity errors encountered!
(first damaged changeset appears to be 2180)

Does anyone (or everyone) else get the same error? Is there a way to
fix it?

--
Anders

I got the following errors when running hg verify:
skavhaug@blakken:~/devel/dolfin-petsc$ hg verify
checking changesets
checking manifests
crosschecking files in changesets and manifests
checking files
 demo/pde/dg/poisson/python/demo.py.orig@4147: empty or missing copy
source revlog demo/pde/dg/python/demo.py.orig:000000000000
 src/demo/mesh/partitioning/cpp/dolfin-mesh-partition-demo@3223: copy
source revision is nullid
src/demo/mesh/partitioning/dolfin-mesh-partition-demo:000000000000
 src/demo/mesh/partitioning/cpp/dolfin-mesh-partition-demo@3242: copy
source revision is nullid
src/demo/mesh/partitioning/dolfin-mesh-partition-demo:000000000000
 src/demo/mesh/partitioning/cpp/test.py@3223: copy source revision is
nullid src/demo/mesh/partitioning/test.py:000000000000
4876 files, 4783 changesets, 42084 total revisions
4 integrity errors encountered!
(first damaged changeset appears to be 3223)

Same here.

I have no idea what to do with it :)

Maybee this give us some clues:

  <http://marc.info/?l=mercurial&m=120594475414715&w=2>

and another one:

 <http://www.nabble.com/Integrity-Error-td19023792.html>

Still complicated...

and not sure we have the same error as them :)

Johan
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