dolfin team mailing list archive

[Kristian Oelgaard <k.b.oelgaard@xxxxxxxxxx>]

Hi,

I get the following error when compiling PyDolfin:

mpic++ -o dolfin/swig/cpp_wrap.os -c -Wall -pipe -ansi -Werror -DDEBUG -g
-DNDEBUG -O2 -DHAS_MPI=1 -DMPICH_IGNORE_CXX_SEEK -DPACKAGE_VERSION=\"0.9.2\"
-DHAS_PETSC=1 -DHAS_SLEPC=1 -DHAS_UMFPACK=1 -DHAS_GTS=1 -DHAS_CHOLMOD=1
-DHAS_MTL4=1 -DHAS_PARMETIS=1 -fno-strict-aliasing -fPIC -I.
-I/home/oelgaard/local/include -I/usr/include -I/usr/include/libxml2
-I/home/oelgaard/local/lib/petsc-3.0.0-p5/linux-gnu-cxx-debug/include
-I/home/oelgaard/local/lib/petsc-3.0.0-p5/include -I/usr/include
-I/usr/lib/openmpi/include -I/usr/lib/openmpi/lib
-I/home/oelgaard/local/lib/slepc-3.0.0-p2
-I/home/oelgaard/local/lib/slepc-3.0.0-p2/linux-gnu-cxx-debug/include
-I/home/oelgaard/local/lib/slepc-3.0.0-p2/include
-I/home/oelgaard/local/lib/petsc-3.0.0-p5/linux-gnu-cxx-debug/include
-I/home/oelgaard/local/lib/petsc-3.0.0-p5/include -I/usr/include
-I/usr/lib/openmpi/include -I/usr/lib/openmpi/lib -I/usr/include/suitesparse
-I/usr/include -I/usr/include/glib-2.0 -I/usr/lib/glib-2.0/include
-I/usr/include/suitesparse -I/home/oelgaard/local/lib/mtl4 -I/usr/include
-I/usr/include -I/usr/include/python2.5 -I/usr/include/python2.5
-I/usr/lib/python2.5/site-packages/numpy/core/include
-I/home/oelgaard/local/include -I/usr/include -I/usr/include/libxml2
-I/home/oelgaard/local/lib/petsc-3.0.0-p5/linux-gnu-cxx-debug/include
-I/home/oelgaard/local/lib/petsc-3.0.0-p5/include -I/usr/include
-I/usr/lib/openmpi/include -I/usr/lib/openmpi/lib
-I/home/oelgaard/local/lib/slepc-3.0.0-p2
-I/home/oelgaard/local/lib/slepc-3.0.0-p2/linux-gnu-cxx-debug/include
-I/home/oelgaard/local/lib/slepc-3.0.0-p2/include
-I/home/oelgaard/local/lib/petsc-3.0.0-p5/linux-gnu-cxx-debug/include
-I/home/oelgaard/local/lib/petsc-3.0.0-p5/include -I/usr/include
-I/usr/lib/openmpi/include -I/usr/lib/openmpi/lib -I/usr/include/suitesparse
-I/usr/include -I/usr/include/glib-2.0 -I/usr/lib/glib-2.0/include
-I/usr/include/suitesparse -I/home/oelgaard/local/lib/mtl4 -I/usr/include
-I/usr/include dolfin/swig/cpp_wrap.cc
dolfin/swig/cpp_wrap.cc:146:20: error: Python.h: No such file or directory
dolfin/swig/cpp_wrap.cc:3330:4: error: #error "This python version requires swig
to be run with the '-classic' option"
dolfin/swig/cpp_wrap.cc:3334:3: error: #error "This python version requires swig
to be run with the '-nomodern' option"
dolfin/swig/cpp_wrap.cc:3337:3: error: #error "This python version requires swig
to be run with the '-nomodernargs' option"
dolfin/swig/cpp_wrap.cc:3340:3: error: #error "This python version requires swig
to be run with the '-nofastunpack' option"
In file included from /usr/include/python2.5/numpy/arrayobject.h:14,
                 from dolfin/swig/cpp_wrap.cc:3430:
/usr/include/python2.5/numpy/ndarrayobject.h:114:2: error: #error Must use
Python with unicode enabled.
dolfin/swig/cpp_wrap.cc:752: error: expected initializer before ‘*’ token
dolfin/swig/cpp_wrap.cc:807: error: expected initializer before ‘*’ token
dolfin/swig/cpp_wrap.cc:828: error: expected initializer before ‘*’ token
In file included from /usr/include/c++/4.3/new:45,
                 from /usr/include/c++/4.3/ext/new_allocator.h:37,
                 from
/usr/include/c++/4.3/i486-linux-gnu/bits/c++allocator.h:39,
                 from /usr/include/c++/4.3/bits/allocator.h:53,
                 from /usr/include/c++/4.3/string:48,
                 from dolfin/swig/cpp_wrap.cc:2520:
/usr/include/c++/4.3/exception:40: error: expected declaration before end of
line
scons: *** [dolfin/swig/cpp_wrap.os] Error 1
scons: building terminated because of errors.
dolfin/swig/cpp_wrap.os failed: Error 1

I have python2.6-dev install, but not python2.5-dev.
Notice the double occurrence of '-I/usr/include/python2.5
-I/usr/include/python2.5' in the cflags. Should one of them be
'-I/usr/include/python2.6'?
If I install python2.5-dev it works without problems, I was just wondering if
this is a bug in the build system?

Kristian