dolfin team mailing list archive

["Garth N. Wells" <gnw20@xxxxxxxxx>]

On Aug 3 2009, Niclas Jansson wrote:

> Hi
>
> I get the following error when I try to compile DOLFIN on FreeBSD
> (8.0-BETA2 i386), using boost 1.39, openmpi 1.3.x and gcc 4.3.4 
> (gcc 4.2.1 gives the same error)

Try installing the development version of UFC.

Garth

> mpic++ -o dolfin/ale/HarmonicSmoothing.os -c -Wall -pipe -ansi -Werror 
> -BOOST_UBLAS_NDEBUG -DDEBUG -g -O2 -DHAS_MPI=1 -DMPICH_IGNORE_CXX_SEEK 
> -DPACKAGE_VERSION=\"0.9.2\" -DHAS_PETSC=1 -DHAS_UMFPACK=1 -DHAS_CHOLMOD=1 
> -DHAS_PARMETIS=1 -fno-strict-aliasing -fPIC -I. 
> -I/home/niclas/pkg/ufc/1.1.2/include -I/usr/local/include 
> -I/usr/local/include -I/usr/local/include -I/usr/local/include/libxml2 
> -I/usr/local/include 
> -I/home/niclas/pkg/petsc/2.3.3/bmake/freebsd8.0-cxx-debug 
> -I/home/niclas/pkg/petsc/2.3.3/include -I/usr/local/mpi/openmpi/include 
> -I/usr/local/mpi/openmpi/lib -Idolfin -I/usr/local/include/ufsparse 
> -I/usr/local/include/ufsparse -I/usr/include 
> dolfin/ale/HarmonicSmoothing.cpp In file included from 
> dolfin/ale/HarmonicSmoothing.cpp:13: dolfin/ale/Poisson1D.h: In member 
> function 'virtual ufc::dof_map* 
> poisson1d_0_dof_map_0::create_sub_dof_map(unsigned int) const': 
> dolfin/ale/Poisson1D.h:864: error: cannot allocate an object of abstract 
> type 'poisson1d_0_dof_map_0' dolfin/ale/Poisson1D.h:719: note: because 
> the following virtual functions are pure within 'poisson1d_0_dof_map_0': 
> /home/niclas/pkg/ufc/1.1.2/include/ufc.h:206: note: virtual unsigned int 
> ufc::dof_map::local_dimension() const dolfin/ale/Poisson1D.h: In member 
> function 'virtual ufc::dof_map* 
> poisson1d_0_dof_map_1::create_sub_dof_map(unsigned int) const': 
> dolfin/ale/Poisson1D.h:1018: error: cannot allocate an object of abstract 
> type 'poisson1d_0_dof_map_1' dolfin/ale/Poisson1D.h:873: note: because 
> the following virtual functions are pure within 'poisson1d_0_dof_map_1': 
> /home/niclas/pkg/ufc/1.1.2/include/ufc.h:206: note: virtual unsigned int 
> ufc::dof_map::local_dimension() const dolfin/ale/Poisson1D.h: In member 
> function 'virtual ufc::dof_map* poisson1d_form_0::create_dof_map(unsigned 
> int) const': dolfin/ale/Poisson1D.h:1224: error: cannot allocate an 
> object of abstract type 'poisson1d_0_dof_map_0' 
> dolfin/ale/Poisson1D.h:719: note: since type 'poisson1d_0_dof_map_0' has 
> pure virtual functions dolfin/ale/Poisson1D.h:1227: error: cannot 
> allocate an object of abstract type 'poisson1d_0_dof_map_1' 
> dolfin/ale/Poisson1D.h:873: note: since type 'poisson1d_0_dof_map_1' has 
> pure virtual functions In file included from dolfin/ale/Poisson1D.h:1261,
>                 from dolfin/ale/HarmonicSmoothing.cpp:13: 
> ./dolfin/fem/DofMap.h: In member function 'unsigned int 
> dolfin::DofMap::local_dimension(const ufc::cell&) const': 
> ./dolfin/fem/DofMap.h:73: error: no matching function for call to 
> 'ufc::dof_map::local_dimension(const ufc::cell&)' 
> /home/niclas/pkg/ufc/1.1.2/include/ufc.h:206: note: candidates are: 
> virtual unsigned int ufc::dof_map::local_dimension() const 
> ./dolfin/fem/DofMap.h: In member function 'unsigned int 
> dolfin::DofMap::max_local_dimension() const': ./dolfin/fem/DofMap.h:77: 
> error: 'class ufc::dof_map' has no member named 'max_local_dimension' In 
> file included from dolfin/ale/HarmonicSmoothing.cpp:13: 
> dolfin/ale/Poisson1D.h: In constructor 
> 'Poisson1D::Form_0_FunctionSpace_0::Form_0_FunctionSpace_0(const 
> dolfin::Mesh&)': dolfin/ale/Poisson1D.h:1359: error: cannot allocate an 
> object of abstract type 'poisson1d_0_dof_map_0' 
> dolfin/ale/Poisson1D.h:719: note: since type 'poisson1d_0_dof_map_0' has 
> pure virtual functions dolfin/ale/Poisson1D.h: In constructor 
> 'Poisson1D::Form_0_FunctionSpace_0::Form_0_FunctionSpace_0(dolfin::Mesh&)': 
> dolfin/ale/Poisson1D.h:1367: error: cannot allocate an object of abstract 
> type 'poisson1d_0_dof_map_0' dolfin/ale/Poisson1D.h:719: note: since type 
> 'poisson1d_0_dof_map_0' has pure virtual functions 
> dolfin/ale/Poisson1D.h: In constructor 
> 'Poisson1D::Form_0_FunctionSpace_0::Form_0_FunctionSpace_0(boost::shared_ptr<dolfin::Mesh>)': 
> dolfin/ale/Poisson1D.h:1375: error: cannot allocate an object of abstract 
> type 'poisson1d_0_dof_map_0' dolfin/ale/Poisson1D.h:719: note: since type 
> 'poisson1d_0_dof_map_0' has pure virtual functions 
> dolfin/ale/Poisson1D.h: In constructor 
> 'Poisson1D::Form_0_FunctionSpace_0::Form_0_FunctionSpace_0(boost::shared_ptr<const 
> dolfin::Mesh>)': dolfin/ale/Poisson1D.h:1383: error: cannot allocate an 
> object of abstract type 'poisson1d_0_dof_map_0' 
> dolfin/ale/Poisson1D.h:719: note: since type 'poisson1d_0_dof_map_0' has 
> pure virtual functions dolfin/ale/Poisson1D.h: In constructor 
> 'Poisson1D::Form_0_FunctionSpace_1::Form_0_FunctionSpace_1(const 
> dolfin::Mesh&)': dolfin/ale/Poisson1D.h:1403: error: cannot allocate an 
> object of abstract type 'poisson1d_0_dof_map_1' 
> dolfin/ale/Poisson1D.h:873: note: since type 'poisson1d_0_dof_map_1' has 
> pure virtual functions dolfin/ale/Poisson1D.h: In constructor 
> 'Poisson1D::Form_0_FunctionSpace_1::Form_0_FunctionSpace_1(dolfin::Mesh&)': 
> dolfin/ale/Poisson1D.h:1411: error: cannot allocate an object of abstract 
> type 'poisson1d_0_dof_map_1' dolfin/ale/Poisson1D.h:873: note: since type 
> 'poisson1d_0_dof_map_1' has pure virtual functions 
> dolfin/ale/Poisson1D.h: In constructor 
> 'Poisson1D::Form_0_FunctionSpace_1::Form_0_FunctionSpace_1(boost::shared_ptr<dolfin::Mesh>)': 
> dolfin/ale/Poisson1D.h:1419: error: cannot allocate an object of abstract 
> type 'poisson1d_0_dof_map_1' dolfin/ale/Poisson1D.h:873: note: since type 
> 'poisson1d_0_dof_map_1' has pure virtual functions 
> dolfin/ale/Poisson1D.h: In constructor 
> 'Poisson1D::Form_0_FunctionSpace_1::Form_0_FunctionSpace_1(boost::shared_ptr<const 
> dolfin::Mesh>)': dolfin/ale/Poisson1D.h:1427: error: cannot allocate an 
> object of abstract type 'poisson1d_0_dof_map_1' 
> dolfin/ale/Poisson1D.h:873: note: since type 'poisson1d_0_dof_map_1' has 
> pure virtual functions In file included from 
> dolfin/ale/HarmonicSmoothing.cpp:14: dolfin/ale/Poisson2D.h: In member 
> function 'virtual ufc::dof_map* 
> poisson2d_0_dof_map_0::create_sub_dof_map(unsigned int) const': 
> dolfin/ale/Poisson2D.h:1020: error: cannot allocate an object of abstract 
> type 'poisson2d_0_dof_map_0' dolfin/ale/Poisson2D.h:861: note: because 
> the following virtual functions are pure within 'poisson2d_0_dof_map_0': 
> /home/niclas/pkg/ufc/1.1.2/include/ufc.h:206: note: virtual unsigned int 
> ufc::dof_map::local_dimension() const dolfin/ale/Poisson2D.h: In member 
> function 'virtual ufc::dof_map* 
> poisson2d_0_dof_map_1::create_sub_dof_map(unsigned int) const': 
> dolfin/ale/Poisson2D.h:1188: error: cannot allocate an object of abstract 
> type 'poisson2d_0_dof_map_1' dolfin/ale/Poisson2D.h:1029: note: because 
> the following virtual functions are pure within 'poisson2d_0_dof_map_1': 
> /home/niclas/pkg/ufc/1.1.2/include/ufc.h:206: note: virtual unsigned int 
> ufc::dof_map::local_dimension() const dolfin/ale/Poisson2D.h: In member 
> function 'virtual ufc::dof_map* poisson2d_form_0::create_dof_map(unsigned 
> int) const': dolfin/ale/Poisson2D.h:1417: error: cannot allocate an 
> object of abstract type 'poisson2d_0_dof_map_0' 
> dolfin/ale/Poisson2D.h:861: note: since type 'poisson2d_0_dof_map_0' has 
> pure virtual functions dolfin/ale/Poisson2D.h:1420: error: cannot 
> allocate an object of abstract type 'poisson2d_0_dof_map_1' 
> dolfin/ale/Poisson2D.h:1029: note: since type 'poisson2d_0_dof_map_1' has 
> pure virtual functions dolfin/ale/Poisson2D.h: In constructor 
> 'Poisson2D::Form_0_FunctionSpace_0::Form_0_FunctionSpace_0(const 
> dolfin::Mesh&)': dolfin/ale/Poisson2D.h:1552: error: cannot allocate an 
> object of abstract type 'poisson2d_0_dof_map_0' 
> dolfin/ale/Poisson2D.h:861: note: since type 'poisson2d_0_dof_map_0' has 
> pure virtual functions dolfin/ale/Poisson2D.h: In constructor 
> 'Poisson2D::Form_0_FunctionSpace_0::Form_0_FunctionSpace_0(dolfin::Mesh&)': 
> dolfin/ale/Poisson2D.h:1560: error: cannot allocate an object of abstract 
> type 'poisson2d_0_dof_map_0' dolfin/ale/Poisson2D.h:861: note: since type 
> 'poisson2d_0_dof_map_0' has pure virtual functions 
> dolfin/ale/Poisson2D.h: In constructor 
> 'Poisson2D::Form_0_FunctionSpace_0::Form_0_FunctionSpace_0(boost::shared_ptr<dolfin::Mesh>)': 
> dolfin/ale/Poisson2D.h:1568: error: cannot allocate an object of abstract 
> type 'poisson2d_0_dof_map_0' dolfin/ale/Poisson2D.h:861: note: since type 
> 'poisson2d_0_dof_map_0' has pure virtual functions 
> dolfin/ale/Poisson2D.h: In constructor 
> 'Poisson2D::Form_0_FunctionSpace_0::Form_0_FunctionSpace_0(boost::shared_ptr<const 
> dolfin::Mesh>)': dolfin/ale/Poisson2D.h:1576: error: cannot allocate an 
> object of abstract type 'poisson2d_0_dof_map_0' 
> dolfin/ale/Poisson2D.h:861: note: since type 'poisson2d_0_dof_map_0' has 
> pure virtual functions dolfin/ale/Poisson2D.h: In constructor 
> 'Poisson2D::Form_0_FunctionSpace_1::Form_0_FunctionSpace_1(const 
> dolfin::Mesh&)': dolfin/ale/Poisson2D.h:1596: error: cannot allocate an 
> object of abstract type 'poisson2d_0_dof_map_1' 
> dolfin/ale/Poisson2D.h:1029: note: since type 'poisson2d_0_dof_map_1' has 
> pure virtual functions dolfin/ale/Poisson2D.h: In constructor 
> 'Poisson2D::Form_0_FunctionSpace_1::Form_0_FunctionSpace_1(dolfin::Mesh&)': 
> dolfin/ale/Poisson2D.h:1604: error: cannot allocate an object of abstract 
> type 'poisson2d_0_dof_map_1' dolfin/ale/Poisson2D.h:1029: note: since 
> type 'poisson2d_0_dof_map_1' has pure virtual functions 
> dolfin/ale/Poisson2D.h: In constructor 
> 'Poisson2D::Form_0_FunctionSpace_1::Form_0_FunctionSpace_1(boost::shared_ptr<dolfin::Mesh>)': 
> dolfin/ale/Poisson2D.h:1612: error: cannot allocate an object of abstract 
> type 'poisson2d_0_dof_map_1' dolfin/ale/Poisson2D.h:1029: note: since 
> type 'poisson2d_0_dof_map_1' has pure virtual functions 
> dolfin/ale/Poisson2D.h: In constructor 
> 'Poisson2D::Form_0_FunctionSpace_1::Form_0_FunctionSpace_1(boost::shared_ptr<const 
> dolfin::Mesh>)': dolfin/ale/Poisson2D.h:1620: error: cannot allocate an 
> object of abstract type 'poisson2d_0_dof_map_1' 
> dolfin/ale/Poisson2D.h:1029: note: since type 'poisson2d_0_dof_map_1' has 
> pure virtual functions In file included from 
> dolfin/ale/HarmonicSmoothing.cpp:15: dolfin/ale/Poisson3D.h: In member 
> function 'virtual ufc::dof_map* 
> poisson3d_0_dof_map_0::create_sub_dof_map(unsigned int) const': 
> dolfin/ale/Poisson3D.h:1256: error: cannot allocate an object of abstract 
> type 'poisson3d_0_dof_map_0' dolfin/ale/Poisson3D.h:1079: note: because 
> the following virtual functions are pure within 'poisson3d_0_dof_map_0': 
> /home/niclas/pkg/ufc/1.1.2/include/ufc.h:206: note: virtual unsigned int 
> ufc::dof_map::local_dimension() const dolfin/ale/Poisson3D.h: In member 
> function 'virtual ufc::dof_map* 
> poisson3d_0_dof_map_1::create_sub_dof_map(unsigned int) const': 
> dolfin/ale/Poisson3D.h:1442: error: cannot allocate an object of abstract 
> type 'poisson3d_0_dof_map_1' dolfin/ale/Poisson3D.h:1265: note: because 
> the following virtual functions are pure within 'poisson3d_0_dof_map_1': 
> /home/niclas/pkg/ufc/1.1.2/include/ufc.h:206: note: virtual unsigned int 
> ufc::dof_map::local_dimension() const dolfin/ale/Poisson3D.h: In member 
> function 'virtual ufc::dof_map* poisson3d_form_0::create_dof_map(unsigned 
> int) const': dolfin/ale/Poisson3D.h:1716: error: cannot allocate an 
> object of abstract type 'poisson3d_0_dof_map_0' 
> dolfin/ale/Poisson3D.h:1079: note: since type 'poisson3d_0_dof_map_0' has 
> pure virtual functions dolfin/ale/Poisson3D.h:1719: error: cannot 
> allocate an object of abstract type 'poisson3d_0_dof_map_1' 
> dolfin/ale/Poisson3D.h:1265: note: since type 'poisson3d_0_dof_map_1' has 
> pure virtual functions dolfin/ale/Poisson3D.h: In constructor 
> 'Poisson3D::Form_0_FunctionSpace_0::Form_0_FunctionSpace_0(const 
> dolfin::Mesh&)': dolfin/ale/Poisson3D.h:1851: error: cannot allocate an 
> object of abstract type 'poisson3d_0_dof_map_0' 
> dolfin/ale/Poisson3D.h:1079: note: since type 'poisson3d_0_dof_map_0' has 
> pure virtual functions dolfin/ale/Poisson3D.h: In constructor 
> 'Poisson3D::Form_0_FunctionSpace_0::Form_0_FunctionSpace_0(dolfin::Mesh&)': 
> dolfin/ale/Poisson3D.h:1859: error: cannot allocate an object of abstract 
> type 'poisson3d_0_dof_map_0' dolfin/ale/Poisson3D.h:1079: note: since 
> type 'poisson3d_0_dof_map_0' has pure virtual functions 
> dolfin/ale/Poisson3D.h: In constructor 
> 'Poisson3D::Form_0_FunctionSpace_0::Form_0_FunctionSpace_0(boost::shared_ptr<dolfin::Mesh>)': 
> dolfin/ale/Poisson3D.h:1867: error: cannot allocate an object of abstract 
> type 'poisson3d_0_dof_map_0' dolfin/ale/Poisson3D.h:1079: note: since 
> type 'poisson3d_0_dof_map_0' has pure virtual functions 
> dolfin/ale/Poisson3D.h: In constructor 
> 'Poisson3D::Form_0_FunctionSpace_0::Form_0_FunctionSpace_0(boost::shared_ptr<const 
> dolfin::Mesh>)': dolfin/ale/Poisson3D.h:1875: error: cannot allocate an 
> object of abstract type 'poisson3d_0_dof_map_0' 
> dolfin/ale/Poisson3D.h:1079: note: since type 'poisson3d_0_dof_map_0' has 
> pure virtual functions dolfin/ale/Poisson3D.h: In constructor 
> 'Poisson3D::Form_0_FunctionSpace_1::Form_0_FunctionSpace_1(const 
> dolfin::Mesh&)': dolfin/ale/Poisson3D.h:1895: error: cannot allocate an 
> object of abstract type 'poisson3d_0_dof_map_1' 
> dolfin/ale/Poisson3D.h:1265: note: since type 'poisson3d_0_dof_map_1' has 
> pure virtual functions dolfin/ale/Poisson3D.h: In constructor 
> 'Poisson3D::Form_0_FunctionSpace_1::Form_0_FunctionSpace_1(dolfin::Mesh&)': 
> dolfin/ale/Poisson3D.h:1903: error: cannot allocate an object of abstract 
> type 'poisson3d_0_dof_map_1' dolfin/ale/Poisson3D.h:1265: note: since 
> type 'poisson3d_0_dof_map_1' has pure virtual functions 
> dolfin/ale/Poisson3D.h: In constructor 
> 'Poisson3D::Form_0_FunctionSpace_1::Form_0_FunctionSpace_1(boost::shared_ptr<dolfin::Mesh>)': 
> dolfin/ale/Poisson3D.h:1911: error: cannot allocate an object of abstract 
> type 'poisson3d_0_dof_map_1' dolfin/ale/Poisson3D.h:1265: note: since 
> type 'poisson3d_0_dof_map_1' has pure virtual functions 
> dolfin/ale/Poisson3D.h: In constructor 
> 'Poisson3D::Form_0_FunctionSpace_1::Form_0_FunctionSpace_1(boost::shared_ptr<const 
> dolfin::Mesh>)': dolfin/ale/Poisson3D.h:1919: error: cannot allocate an 
> object of abstract type 'poisson3d_0_dof_map_1' 
> dolfin/ale/Poisson3D.h:1265: note: since type 'poisson3d_0_dof_map_1' has 
> pure virtual functions scons: *** [dolfin/ale/HarmonicSmoothing.os] Error 
> 1 scons: building terminated because of errors. 
> dolfin/ale/HarmonicSmoothing.os failed: Error 1