dolfin team mailing list archive

[Harish Narayanan <harish.mlists@xxxxxxxxx>]

On 9/1/10 6:39 PM, Garth N. Wells wrote:
> Could someone with OSX see if this fixes the problem with the PETSc and
> SLEPc tests when CXX is not set?

I now run into the following. (I removed dorsal_build_dir before the
build.) The export CXX=mpic++ doesn't seem to be being caught. And
notice evil things like 'Parse Error'.

-- The C compiler identification is GNU
-- The CXX compiler identification is GNU
-- Checking whether C compiler has -isysroot
-- Checking whether C compiler has -isysroot - yes
-- Checking whether C compiler supports OSX deployment target flag
-- Checking whether C compiler supports OSX deployment target flag - yes
-- Check for working C compiler: /opt/local/bin/gcc
-- Check for working C compiler: /opt/local/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Checking whether CXX compiler has -isysroot
-- Checking whether CXX compiler has -isysroot - yes
-- Checking whether CXX compiler supports OSX deployment target flag
-- Checking whether CXX compiler supports OSX deployment target flag - yes
-- Check for working CXX compiler: /opt/local/bin/c++
-- Check for working CXX compiler: /opt/local/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Performing Test HAVE_PIPE
-- Performing Test HAVE_PIPE - Success
-- Performing Test HAVE_PEDANTIC
-- Performing Test HAVE_PEDANTIC - Success
-- Performing Test HAVE_STD
-- Performing Test HAVE_STD - Success
-- Performing Test HAVE_DEBUG
-- Performing Test HAVE_DEBUG - Success
-- Performing Test HAVE_O2_OPTIMISATION
-- Performing Test HAVE_O2_OPTIMISATION - Success
-- Boost version: 1.44.0
-- Found the following Boost libraries:
--   filesystem
--   program_options
--   system
-- Checking for package 'Armadillo'
-- Performing Test ARMADILLO_TEST_RUNS
-- Performing Test ARMADILLO_TEST_RUNS - Success
-- Found Armadillo: TRUE
-- Found LibXml2: /opt/local/lib/libxml2.dylib
-- Found PythonInterp: /opt/local/bin/python2.6
-- Found PythonLibs: /usr/lib/libpython2.6.dylib
-- NumPy headers found
-- Found MPI: /usr/lib/libmpi_cxx.dylib
-- Found ParMETIS: /Users/harish/Work/FEniCS/dev/include
-- Checking for package 'SCOTCH-PT'
-- Found SCOTCH: /Users/harish/Work/FEniCS/dev/include
-- Checking for package 'AMD'
-- Found AMD: /opt/local/include/ufsparse
-- Checking for package 'BLAS'
-- Found BLAS: /System/Library/Frameworks/vecLib.framework/Headers
-- Checking for package 'UMFPACK'
-- Performing Test UMFPACK_TEST_RUNS
-- Performing Test UMFPACK_TEST_RUNS - Success
-- Found UMFPACK: /opt/local/include/ufsparse
-- Checking for package 'CHOLMOD'
-- Checking for package 'AMD'
-- Checking for package 'BLAS'
-- Checking for package 'LAPACK'
-- Found LAPACK: /usr/lib/liblapack.dylib
-- Performing Test CHOLMOD_TEST_RUNS
-- Performing Test CHOLMOD_TEST_RUNS - Success
-- Found CHOLMOD: /opt/local/include/ufsparse
-- Found CHOLMOD:
/opt/local/lib/libcholmod.a;/opt/local/lib/libamd.a;/opt/local/lib/libcamd.a;/opt/local/lib/libcolamd.a;/opt/local/lib/libccolamd.a;/usr/lib/libatlas.dylib;/Users/harish/Work/FEniCS/dev/lib/libparmetis.a;/opt/local/lib/libmetis.dylib;/usr/lib/liblapack.dylib
-- Checking for package 'Trilinos'
-- Checking for package 'MTL4'
-- Checking for package 'BLAS'
-- Performing Test MTL4_TEST_RUNS
-- Performing Test MTL4_TEST_RUNS - Success
-- Found MTL4: /Users/harish/Work/FEniCS/dev/src/mtl4
-- Checking for package 'PETSc'
-- PETSC_DIR is /Users/harish/Work/FEniCS/dev/src/petsc-3.1-p4
-- PETSC_ARCH is darwin10.0.0-cxx-opt
-- Found petscconf.h
-- Performing Test PETSC_TEST_RUNS
Parse error in command line argument: -D_REENTRANT
Should be: VAR:type=value
CMake Error: No cmake script provided.
CMake Error: Internal CMake error, TryCompile configure of cmake failed
-- Performing Test PETSC_TEST_RUNS - Failed
-- PETSc test failed
-- PETSc could not be found. Be sure to set PETSC_DIR and PETSC_ARCH.
(missing:  PETSC_TEST_RUNS)
-- Found GMP: /opt/local/include
-- Checking for package 'CGAL'
-- Performing Test CGAL_TEST_RUNS
-- Performing Test CGAL_TEST_RUNS - Success
-- Found CGAL:
/opt/local/lib/libCGAL.dylib;/opt/local/lib/libgmpxx.dylib;/opt/local/lib/libmpfr.dylib;/opt/local/lib/libgmp.dylib;/opt/local/lib/libboost_thread-mt.dylib
-- Found ZLIB: /usr/include
-- Checking for package 'CPPUNIT'
-- Found CPPUNIT: /opt/local/include/cppunit
-- The following optional packages were found:
-- (OK) MPI
-- (OK) MTL4
-- (OK) UMFPACK
-- (OK) CHOLMOD
-- (OK) SCOTCH
-- (OK) PARMETIS
-- (OK) GMP
-- (OK) CGAL
-- (OK) ZLIB
-- (OK) PYTHON
-- The following optional packages could not be found:
-- (**) PETSC
-- (**) SLEPC
-- (**) TRILINOS
-- Configuring incomplete, errors occurred!
Failure with exit status: 1
Exit message: There was a problem building dolfin.

Harish