dorsal team mailing list archive

[Marie Rognes <meg@xxxxxxxxx>]

On 31. aug. 2010 22:56, Anders Logg wrote:
> On Tue, Aug 31, 2010 at 04:28:32PM +0200, Marie Rognes wrote:
>   
>> On 31. aug. 2010 16:22, Johannes Ring wrote:
>>     
>>> On Tue, Aug 31, 2010 at 4:13 PM, Marie Rognes <meg@xxxxxxxxx> wrote:
>>>
>>>       
>>>> I having some issues with PETSc (surprise) as of today.
>>>>
>>>> Dorsal tells me that (full log attached):
>>>>
>>>> [\snip]
>>>>
>>>> -- The following optional packages were found:
>>>> -- (OK) MPI
>>>> -- (OK) PETSC
>>>> -- (OK) SLEPC
>>>> -- (OK) UMFPACK
>>>>
>>>> [\snap]
>>>>
>>>> But:
>>>>
>>>>
>>>>         
>>>>>>> from dolfin import *
>>>>>>> has_la_backend("PETSc")
>>>>>>>
>>>>>>>               
>>>> False
>>>>
>>>>         
>>>>>>> A = PETScMatrix()
>>>>>>>
>>>>>>>               
>>>> Traceback (most recent call last):
>>>>   File "<stdin>", line 1, in <module>
>>>> NameError: name 'PETScMatrix' is not defined
>>>>
>>>>         
>>>>>>>               
>>>> Help?
>>>>
>>>>         
>>> There is no -DHAS_PETSC in your log. Try to clean up/remove the
>>> dorsal_build_dir inside the DOLFIN source directory.
>>>       
>>
>> Removed. Check.
>>
>>
>>     
>>> Then rerun Dorsal
>>> and see if the PETSc test passes.
>>>
>>>       
>> -- The following optional packages were found:
>> -- (OK) MPI
>> -- (OK) PETSC
>> -- (OK) SLEPC
>> -- (OK) UMFPACK
>> -- (OK) PARMETIS
>> -- (OK) GMP
>> -- (OK) CGAL
>> -- (OK) ZLIB
>> -- (OK) PYTHON
>> -- The following optional packages could not be found:
>> -- (**) TRILINOS
>> -- (**) MTL4
>> -- (**) CHOLMOD
>> -- (**) SCOTCH
>> -- Configuring done
>> -- Generating done
>> -- Build files have been written to: /home/meg/local/dorsal_downloads/dolfin
>> make: *** No rule to make target `install'.  Stop.
>> Failure with exit status: 2
>> Exit message: There was a problem building dolfin.
>>     
> I had the same problem (I think). It turned out to be a problem with my
> PETSC_ARCH variable which was set to linux-gnu-c-opt instead of
> linux-gnu-cxx-opt.
>
>   

Doesn't solve the problem for me :(

- My PETSC_ARCH is set to linux-gnu-cxx-opt (cf gentoo.platform)
- cmake reports: -- PETSC_ARCH is linux-gnu-cxx-opt
- Still get same problem.

> I think this changed in Dorsal at some point recently.
>
>   

Everything updated as of 20 seconds ago ...

--
Marie