dorsal team mailing list archive

[Johannes Ring <johannr@xxxxxxxxx>]

On Mon, Aug 8, 2011 at 6:21 PM, Douglas N Arnold <arnold@xxxxxxx> wrote:
> It works!  Thanks a lot, Johannes.

Good, I'm glad it works.

> In summary, with the platform file below and
>
> LD_LIBRARY_PATH=${INSTALL_PATH}/lib/vtk-5.6:${INSTALL_PATH}/lib:$LD_LIBRARY_PATH:/usr/lib/openmpi/lib
>
> dolfin installs and functions under Scientific Linux 6,
> including viper.
>
> Note that I also needed to explicitly add /usr/lib/openmpi/lib
> to LD_LIBRARY_PATH.

Ok. Maybe it's not related, but did you try running

  module load openmpi-x86_64

as suggested in the rhel6.platform file?

> Platform file for Scientific Linux 6 (probably also RHEL 6 and CentOS 6)
> # This build script assumes that you have several packages already
> # installed installed via Fedora's yum using the following command:
> #
> # su -c 'yum install -y wget bzr pkgconfig libxml2-devel gcc gcc-c++ \
> # openmpi-devel openmpi numpy swig boost-devel atlas-devel blas-devel \
> # lapack-devel python-devel cmake mpfr-devel gmp-devel cppunit-devel'
> ##
>
> # Platform specific variables
> default PETSC_ARCH=linux-gnu-cxx-opt
> default SCOTCH_ARCH=pc_linux2
>
> # Define the packages this platform needs
> PACKAGES=(
> cmake
> vtk
> parmetis
> scotch
> trilinos
> petsc
> slepc
> armadillo
> cgal
> scientificpython
> fiat
> ferari
> ufc
> ufl
> ffc
> viper
> instant
> dolfin
> )

Thanks. I have update the rhel6.platform file since they are very similar.

Johannes