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[Jonathan <johnny.one.eye@xxxxxxxxx>]

I believe this is because the "filesystem" includes both your /
partition and gvfs by default.  Go to Edit -> Preferences in Disk Usage
Analyzer to see what I mean.  It's essentially listing your / partition
twice.  Not quite sure why it would be set up like that.

-- 
disk usage analyzer reports wrong values
https://bugs.launchpad.net/bugs/237463
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Status in Mactel Support: Invalid
Status in “baobab” source package in Ubuntu: New

Bug description:
I have a recent macbook with 160 GiB Hard drive, entirely occupied by a single ubuntu hardy install (of course the hard drive is actually a bit smaller, as hardrive companies usually cheat on real size). while the system recognizes the disk space propertly (even nautilus shows the right values: 120 GiB occupied, 16 GiB free -the rest is 6 GiB swap), the "disk usage analyzer" (baobab package) basically doubles the size:
283 GiB occupied, 47,2 free, for a total of more than 320 GiB. The "scan filesystem" utility in baobab works fine, anyway. See attachment