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[samandiriel <41301@xxxxxxxxxxxxxxxxxx>]

I also have this problem on 10.04 (and 9.10, when I was using that).

The problem *only* occurs when I use a Java based application called
Aptana (v2 or v3), which is based on Eclipse.  Usually it occurs when I
am using a tree navigation pane and either double or single click on an
item.  Mouse left click will then stop working.  Keyboard and mouse
middle/right clicks still work.  Problem occurs fairly frequently.

I tried the alt-tab and alt-ctrl-1>7 suggestion, unplugging my mouse and
"modprobe -r usbhid && modprobe usbhid" to no effect.  I always have to
reboot.

Currently trying the suggestion to add "noapic acpi=off" to my menu.lst
entry.

Mouse is a Logitech Cordless Trackman.
Video is NVIDIA GeForce 8400 GS, currently using non-free driver 195.36.24 and TwinView.
Java is currently sun-java6.
Flash is Adobe's.
Not using Compiz.

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https://bugs.launchpad.net/bugs/41301

Title:
  Mouse clicks stop working sporadically