yade-dev team mailing list archive

[Anton Gladky <681018@xxxxxxxxxxxxxxxxxx>]

With r2580, I get the following crash:

But the attached at first messge script does not give this error.

Vaclav, do you need the "crashing" script, or backtrace is enough?

Thank you


python: /home/gladk/dem/yade/cleanCompDebug/yade/core/InteractionContainer.cpp:44: bool 
 InteractionContainer::erase(int, int): Assertion `b1' failed.
SIGSEGV/SIGABRT handler called; gdb batch file is `/tmp/yade-ZOjnOf/tmp-0'
GNU gdb (GDB) 7.1-ubuntu
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and "show warranty" for details.
This GDB was configured as "x86_64-linux-gnu".
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<http://www.gnu.org/software/gdb/bugs/>.
[Thread debugging using libthread_db enabled]
[New Thread 0x7f1ad1c9e710 (LWP 4730)]
[New Thread 0x7f1ad9b84710 (LWP 4729)]
[New Thread 0x7f1aeaada710 (LWP 4727)]
[New Thread 0x7f1aeb2db710 (LWP 4725)]
0x00007f1b0adef11d in nanosleep () at ../sysdeps/unix/syscall-template.S:82
82	../sysdeps/unix/syscall-template.S: No such file or directory.
	in ../sysdeps/unix/syscall-template.S
No symbol "info" in current context.

Thread 5 (Thread 0x7f1aeb2db710 (LWP 4725)):
#0  0x00007f1b09cb8ff3 in select () at ../sysdeps/unix/syscall-template.S:82
#1  0x00000000004f7013 in select_select (self=<value optimized out>, args=<value optimized out>) at ../Modules/selectmodule.c:278
#2  0x00000000004a7c5e in call_function (f=Frame 0x7f1ae4002cd0, for file /usr/lib/python2.6/SocketServer.py, line 224, in serve_forever (self=<ThreadingTCPServer(RequestHandlerClass=<classobj at remote 0x1d13830>, authenticated=[], socket=<_socketobject at remote 0x1ca0600>, server_address=('0.0.0.0', 9000), cookie='ykuasc', _BaseServer__serving=True, _BaseServer__is_shut_down=<_Event(_Verbose__verbose=False, _Event__flag=False, _Event__cond=<_Condition(_Verbose__verbose=False, _Condition__lock=<thread.lock at remote 0x7f1b0b1021b0>, acquire=<built-in method acquire of thread.lock object at remote 0x7f1b0b1021b0>, _Condition__waiters=[], release=<built-in method release of thread.lock object at remote 0x7f1b0b1021b0>) at remote 0x1cf5990>) at remote 0x1ca2710>) at remote 0x1cab7e8>, poll_interval=<float at remote 0x1a5c730>, r=[], w=[], e=[]), throwflag=<value optimized out>) at ../Python/ceval.c:3750
#3  PyEval_EvalFrameEx (f=Frame 0x7f1ae4002cd0, for file /usr/lib/python2.6/SocketServer.py, line 224, in serve_forever (self=<ThreadingTCPServer(RequestHandlerClass=<classobj at remote 0x1d13830>, authenticated=[], socket=<_socketobject at remote 0x1ca0600>, server_address=('0.0.0.0', 9000), cookie='ykuasc', _BaseServer__serving=True, _BaseServer__is_shut_down=<_Event(_Verbose__verbose=False, _Event__flag=False, _Event__cond=<_Condition(_Verbose__verbose=False, _Condition__lock=<thread.lock at remote 0x7f1b0b1021b0>, acquire=<built-in method acquire of thread.lock object at remote 0x7f1b0b1021b0>, _Condition__waiters=[], release=<built-in method release of thread.lock object at remote 0x7f1b0b1021b0>) at remote 0x1cf5990>) at remote 0x1ca2710>) at remote 0x1cab7e8>, poll_interval=<float at remote 0x1a5c730>, r=[], w=[], e=[]), throwflag=<value optimized out>) at ../Python/ceval.c:2412
#4  0x00000000004a9671 in PyEval_EvalCodeEx (co=0x1caee40, globals=<value optimized out>, locals=<value optimized out>, args=0x2, argcount=<value optimized out>, kws=<value optimized out>, kwcount=0, defs=0x1ca2aa8, defcount=1, closure=0x0) at ../Python/ceval.c:3000
#5  0x00000000004a7809 in fast_function (f=Frame 0x7f1ae4002b10, for file /home/gladk/dem/yade/cleanCompDebug/build/lib/yade-cleanCompDebug/dbg/py/yade/remote.py, line 121, in run (self=<WorkerThread(func=<instancemethod at remote 0x1c971e0>) at remote 0x1bd2a68>), throwflag=<value optimized out>) at ../Python/ceval.c:3846
#6  call_function (f=Frame 0x7f1ae4002b10, for file /home/gladk/dem/yade/cleanCompDebug/build/lib/yade-cleanCompDebug/dbg/py/yade/remote.py, line 121, in run (self=<WorkerThread(func=<instancemethod at remote 0x1c971e0>) at remote 0x1bd2a68>), throwflag=<value optimized out>) at ../Python/ceval.c:3771
#7  PyEval_EvalFrameEx (f=Frame 0x7f1ae4002b10, for file /home/gladk/dem/yade/cleanCompDebug/build/lib/yade-cleanCompDebug/dbg/py/yade/remote.py, line 121, in run (self=<WorkerThread(func=<instancemethod at remote 0x1c971e0>) at remote 0x1bd2a68>), throwflag=<value optimized out>) at ../Python/ceval.c:2412
#8  0x00000000004a9671 in PyEval_EvalCodeEx (co=0x1cae990, globals=<value optimized out>, locals=<value optimized out>, args=0x1, argcount=<value optimized out>, kws=<value optimized out>, kwcount=0, defs=0x0, defcount=0, closure=0x0) at ../Python/ceval.c:3000
#9  0x0000000000537620 in function_call (func=<function at remote 0x1cf8cf8>, arg=(<WorkerThread(func=<instancemethod at remote 0x1c971e0>) at remote 0x1bd2a68>,), kw=0x0) at ../Objects/funcobject.c:524
#10 0x000000000041f0c7 in PyObject_Call (func=<function at remote 0x1cf8cf8>, arg=<unknown at remote 0x7f1aeb2da500>, kw=<unknown at remote 0x7f1aeb2da480>) at ../Objects/abstract.c:2492
#11 0x0000000000427dff in instancemethod_call (func=<function at remote 0x1cf8cf8>, arg=(<WorkerThread(func=<instancemethod at remote 0x1c971e0>) at remote 0x1bd2a68>,), kw=0x0) at ../Objects/classobject.c:2579
#12 0x000000000041f0c7 in PyObject_Call (func=<instancemethod at remote 0x1c97230>, arg=<unknown at remote 0x7f1aeb2da500>, kw=<unknown at remote 0x7f1aeb2da480>) at ../Objects/abstract.c:2492
#13 0x00000000004a1b03 in PyEval_CallObjectWithKeywords (func=<instancemethod at remote 0x1c97230>, arg=(), kw=<unknown at remote 0x7f1aeb2da480>) at ../Python/ceval.c:3619
#14 0x00007f1aeb2e5d3b in ?? () from /usr/lib/pymodules/python2.6/sip.so
#15 0x00007f1aeb58d468 in ?? () from /usr/lib/pymodules/python2.6/PyQt4/QtCore.so
#16 0x00007f1aeb5bd630 in ?? () from /usr/lib/pymodules/python2.6/PyQt4/QtCore.so
#17 0x00007f1b06147775 in ?? () from /usr/lib/libQtCore.so.4
#18 0x00007f1b0ade69ca in start_thread (arg=<value optimized out>) at pthread_create.c:300
#19 0x00007f1b09cc070d in clone () at ../sysdeps/unix/sysv/linux/x86_64/clone.S:112
#20 0x0000000000000000 in ?? ()

Thread 4 (Thread 0x7f1aeaada710 (LWP 4727)):
#0  0x00007f1b09cb8ff3 in select () at ../sysdeps/unix/syscall-template.S:82
#1  0x00000000004f7013 in select_select (self=<value optimized out>, args=<value optimized out>) at ../Modules/selectmodule.c:278
#2  0x00000000004a7c5e in call_function (f=Frame 0x1e0e320, for file /usr/lib/python2.6/SocketServer.py, line 224, in serve_forever (self=<SimpleXMLRPCServer(funcs={}, RequestHandlerClass=<classobj at remote 0x1d9e8f0>, socket=<_socketobject at remote 0x1d0bd70>, encoding=None, server_address=('0.0.0.0', 21000), logRequests=False, allow_dotted_names=False, instance=<InfoProvider() at remote 0x1db15a8>, allow_none=True, _BaseServer__serving=True, _BaseServer__is_shut_down=<_Event(_Verbose__verbose=False, _Event__flag=False, _Event__cond=<_Condition(_Verbose__verbose=False, _Condition__lock=<thread.lock at remote 0x7f1b0b102780>, acquire=<built-in method acquire of thread.lock object at remote 0x7f1b0b102780>, _Condition__waiters=[], release=<built-in method release of thread.lock object at remote 0x7f1b0b102780>) at remote 0x1db5710>) at remote 0x1db5610>) at remote 0x1db1368>, poll_interval=<float at remote 0x1a5c730>, r=[], w=[], e=[]), throwflag=<value optimized out>) at ../Python/ceval.c:3750
#3  PyEval_EvalFrameEx (f=Frame 0x1e0e320, for file /usr/lib/python2.6/SocketServer.py, line 224, in serve_forever (self=<SimpleXMLRPCServer(funcs={}, RequestHandlerClass=<classobj at remote 0x1d9e8f0>, socket=<_socketobject at remote 0x1d0bd70>, encoding=None, server_address=('0.0.0.0', 21000), logRequests=False, allow_dotted_names=False, instance=<InfoProvider() at remote 0x1db15a8>, allow_none=True, _BaseServer__serving=True, _BaseServer__is_shut_down=<_Event(_Verbose__verbose=False, _Event__flag=False, _Event__cond=<_Condition(_Verbose__verbose=False, _Condition__lock=<thread.lock at remote 0x7f1b0b102780>, acquire=<built-in method acquire of thread.lock object at remote 0x7f1b0b102780>, _Condition__waiters=[], release=<built-in method release of thread.lock object at remote 0x7f1b0b102780>) at remote 0x1db5710>) at remote 0x1db5610>) at remote 0x1db1368>, poll_interval=<float at remote 0x1a5c730>, r=[], w=[], e=[]), throwflag=<value optimized out>) at ../Python/ceval.c:2412
#4  0x00000000004a9671 in PyEval_EvalCodeEx (co=0x1caee40, globals=<value optimized out>, locals=<value optimized out>, args=0x2, argcount=<value optimized out>, kws=<value optimized out>, kwcount=0, defs=0x1ca2aa8, defcount=1, closure=0x0) at ../Python/ceval.c:3000
#5  0x00000000004a7809 in fast_function (f=Frame 0x1e09540, for file /home/gladk/dem/yade/cleanCompDebug/build/lib/yade-cleanCompDebug/dbg/py/yade/remote.py, line 121, in run (self=<WorkerThread(func=<instancemethod at remote 0x1bc0eb0>) at remote 0x1dc4050>), throwflag=<value optimized out>) at ../Python/ceval.c:3846
#6  call_function (f=Frame 0x1e09540, for file /home/gladk/dem/yade/cleanCompDebug/build/lib/yade-cleanCompDebug/dbg/py/yade/remote.py, line 121, in run (self=<WorkerThread(func=<instancemethod at remote 0x1bc0eb0>) at remote 0x1dc4050>), throwflag=<value optimized out>) at ../Python/ceval.c:3771
#7  PyEval_EvalFrameEx (f=Frame 0x1e09540, for file /home/gladk/dem/yade/cleanCompDebug/build/lib/yade-cleanCompDebug/dbg/py/yade/remote.py, line 121, in run (self=<WorkerThread(func=<instancemethod at remote 0x1bc0eb0>) at remote 0x1dc4050>), throwflag=<value optimized out>) at ../Python/ceval.c:2412
#8  0x00000000004a9671 in PyEval_EvalCodeEx (co=0x1cae990, globals=<value optimized out>, locals=<value optimized out>, args=0x1, argcount=<value optimized out>, kws=<value optimized out>, kwcount=0, defs=0x0, defcount=0, closure=0x0) at ../Python/ceval.c:3000
#9  0x0000000000537620 in function_call (func=<function at remote 0x1d1a6e0>, arg=(<WorkerThread(func=<instancemethod at remote 0x1bc0eb0>) at remote 0x1dc4050>,), kw=0x0) at ../Objects/funcobject.c:524
#10 0x000000000041f0c7 in PyObject_Call (func=<function at remote 0x1d1a6e0>, arg=<unknown at remote 0x7f1aeaad9500>, kw=<unknown at remote 0x7f1aeaad9480>) at ../Objects/abstract.c:2492
#11 0x0000000000427dff in instancemethod_call (func=<function at remote 0x1d1a6e0>, arg=(<WorkerThread(func=<instancemethod at remote 0x1bc0eb0>) at remote 0x1dc4050>,), kw=0x0) at ../Objects/classobject.c:2579
#12 0x000000000041f0c7 in PyObject_Call (func=<instancemethod at remote 0x1c97190>, arg=<unknown at remote 0x7f1aeaad9500>, kw=<unknown at remote 0x7f1aeaad9480>) at ../Objects/abstract.c:2492
#13 0x00000000004a1b03 in PyEval_CallObjectWithKeywords (func=<instancemethod at remote 0x1c97190>, arg=(), kw=<unknown at remote 0x7f1aeaad9480>) at ../Python/ceval.c:3619
#14 0x00007f1aeb2e5d3b in ?? () from /usr/lib/pymodules/python2.6/sip.so
#15 0x00007f1aeb58d468 in ?? () from /usr/lib/pymodules/python2.6/PyQt4/QtCore.so
#16 0x00007f1aeb5bd630 in ?? () from /usr/lib/pymodules/python2.6/PyQt4/QtCore.so
#17 0x00007f1b06147775 in ?? () from /usr/lib/libQtCore.so.4
#18 0x00007f1b0ade69ca in start_thread (arg=<value optimized out>) at pthread_create.c:300
#19 0x00007f1b09cc070d in clone () at ../sysdeps/unix/sysv/linux/x86_64/clone.S:112
#20 0x0000000000000000 in ?? ()

Thread 3 (Thread 0x7f1ad9b84710 (LWP 4729)):
#0  0x00007f1b09cb8ff3 in select () at ../sysdeps/unix/syscall-template.S:82
#1  0x00007f1ad9c60e2e in ?? () from /usr/lib/libtcl8.5.so.0
#2  0x00007f1b0ade69ca in start_thread (arg=<value optimized out>) at pthread_create.c:300
#3  0x00007f1b09cc070d in clone () at ../sysdeps/unix/sysv/linux/x86_64/clone.S:112
#4  0x0000000000000000 in ?? ()

Thread 2 (Thread 0x7f1ad1c9e710 (LWP 4730)):
#0  0x00007f1b09c83fbd in __libc_waitpid (pid=20358, stat_loc=<value optimized out>, options=0) at ../sysdeps/unix/sysv/linux/waitpid.c:41
#1  0x00007f1b09c1b7e9 in do_system (line=<value optimized out>) at ../sysdeps/posix/system.c:149
#2  0x00007f1b09c1bb20 in __libc_system (line=<value optimized out>) at ../sysdeps/posix/system.c:190
#3  0x00007f1b0b091353 in crashHandler (sig=6) at core/main/pyboot.cpp:45
#4  <signal handler called>
#5  0x00007f1b09c0da75 in *__GI_raise (sig=<value optimized out>) at ../nptl/sysdeps/unix/sysv/linux/raise.c:64
#6  0x00007f1b09c115c0 in *__GI_abort () at abort.c:92
#7  0x00007f1b09c06941 in *__GI___assert_fail (assertion=0x7f1b041576b1 "b1", file=<value optimized out>, line=44, function=0x7f1b04197ce0 "bool InteractionContainer::erase(int, int)") at assert.c:81
#8  0x00007f1b03eb918d in InteractionContainer::erase (this=0x14302c0, id1=5271, id2=34763) at /home/gladk/dem/yade/cleanCompDebug/yade/core/InteractionContainer.cpp:44
#9  0x00007f1af23fba16 in InteractionContainer::erasePending<InsertionSortCollider> (this=0x14302c0, t=..., rb=0x14334e0) at /home/gladk/dem/yade/cleanCompDebug/build-cleanCompDebug/dbg/include/yade/core/InteractionContainer.hpp:146
#10 0x00007f1af23eccc2 in InsertionSortCollider::action (this=0x7c6a510) at /home/gladk/dem/yade/cleanCompDebug/yade/pkg/common/InsertionSortCollider.cpp:242
#11 0x00007f1b03ebbffb in Scene::moveToNextTimeStep (this=0x14334e0) at /home/gladk/dem/yade/cleanCompDebug/yade/core/Scene.cpp:92
#12 0x00007f1b03ec2d9e in SimulationFlow::singleAction (this=0x13880c0) at /home/gladk/dem/yade/cleanCompDebug/yade/core/SimulationFlow.cpp:20
#13 0x00007f1b03ec45b8 in ThreadWorker::callSingleAction (this=0x13880c0) at /home/gladk/dem/yade/cleanCompDebug/yade/core/ThreadWorker.cpp:71
#14 0x00007f1b03ec3aab in ThreadRunner::call (this=0x14366e0) at /home/gladk/dem/yade/cleanCompDebug/yade/core/ThreadRunner.cpp:53
#15 0x00007f1b03ec37dd in ThreadRunner::run (this=0x14366e0) at /home/gladk/dem/yade/cleanCompDebug/yade/core/ThreadRunner.cpp:27
#16 0x00007f1b03f8d6d5 in boost::_mfi::mf0<void, ThreadRunner>::operator() (this=0x3399cd0, p=0x14366e0) at /usr/include/boost/bind/mem_fn_template.hpp:49
#17 0x00007f1b03f7ec6e in boost::_bi::list1<boost::_bi::value<ThreadRunner*> >::operator()<boost::_mfi::mf0<void, ThreadRunner>, boost::_bi::list0> (this=0x3399ce0, f=..., a=...) at /usr/include/boost/bind/bind.hpp:246
#18 0x00007f1b03f6b635 in boost::_bi::bind_t<void, boost::_mfi::mf0<void, ThreadRunner>, boost::_bi::list1<boost::_bi::value<ThreadRunner*> > >::operator() (this=0x3399cd0) at /usr/include/boost/bind/bind_template.hpp:20
#19 0x00007f1b03f57fba in boost::detail::function::void_function_obj_invoker0<boost::_bi::bind_t<void, boost::_mfi::mf0<void, ThreadRunner>, boost::_bi::list1<boost::_bi::value<ThreadRunner*> > >, void>::invoke (function_obj_ptr=...) at /usr/include/boost/function/function_template.hpp:153
#20 0x00007f1b04027bff in boost::function0<void>::operator() (this=0x3399cc8) at /usr/include/boost/function/function_template.hpp:1013
#21 0x00007f1b04000f84 in boost::detail::thread_data<boost::function0<void> >::run (this=0x3399bc0) at /usr/include/boost/thread/detail/thread.hpp:56
#22 0x00007f1b0898ab70 in thread_proxy () from /usr/lib/libboost_thread.so.1.40.0
#23 0x00007f1b0ade69ca in start_thread (arg=<value optimized out>) at pthread_create.c:300
#24 0x00007f1b09cc070d in clone () at ../sysdeps/unix/sysv/linux/x86_64/clone.S:112
#25 0x0000000000000000 in ?? ()

Thread 1 (Thread 0x7f1b0b1e7700 (LWP 4722)):
#0  0x00007f1b0adef11d in nanosleep () at ../sysdeps/unix/syscall-template.S:82
#1  0x00007f1aef4eb4f8 in pyOmega::wait (this=0x13069c0) at py/wrapper/yadeWrapper.cpp:366
#2  0x00007f1aef5ebbc5 in boost::python::detail::invoke<int, void (pyOmega::*)(), boost::python::arg_from_python<pyOmega&> > (f=@0x1492bd8, tc=...) at /usr/include/boost/python/detail/invoke.hpp:94
#3  0x00007f1aef5ca22b in boost::python::detail::caller_arity<1u>::impl<void (pyOmega::*)(), boost::python::default_call_policies, boost::mpl::vector2<void, pyOmega&> >::operator() (this=0x1492bd8, args_=(<Omega at remote 0x1306980>,)) at /usr/include/boost/python/detail/caller.hpp:223
#4  0x00007f1aef5aefe9 in boost::python::objects::caller_py_function_impl<boost::python::detail::caller<void (pyOmega::*)(), boost::python::default_call_policies, boost::mpl::vector2<void, pyOmega&> > >::operator() (this=0x1492bd0, args=(<Omega at remote 0x1306980>,), kw=0x0) at /usr/include/boost/python/object/py_function.hpp:38
#5  0x00007f1b07977c2e in boost::python::objects::function::call(_object*, _object*) const () from /usr/lib/libboost_python-py26.so.1.40.0
#6  0x00007f1b07977ed8 in ?? () from /usr/lib/libboost_python-py26.so.1.40.0
#7  0x00007f1b0797f54b in boost::python::handle_exception_impl(boost::function0<void>) () from /usr/lib/libboost_python-py26.so.1.40.0
#8  0x00007f1b079747d8 in ?? () from /usr/lib/libboost_python-py26.so.1.40.0
#9  0x000000000041f0c7 in PyObject_Call (func=<Boost.Python.function at remote 0x1492bf0>, arg=<unknown at remote 0x7fff314b8b10>, kw=<unknown at remote 0x7fff314b8b10>) at ../Objects/abstract.c:2492
#10 0x00000000004a7378 in do_call (f=Frame 0x33b2690, for file SiebMaschine.py, line 167, in <module> (), throwflag=<value optimized out>) at ../Python/ceval.c:3968
#11 call_function (f=Frame 0x33b2690, for file SiebMaschine.py, line 167, in <module> (), throwflag=<value optimized out>) at ../Python/ceval.c:3773
#12 PyEval_EvalFrameEx (f=Frame 0x33b2690, for file SiebMaschine.py, line 167, in <module> (), throwflag=<value optimized out>) at ../Python/ceval.c:2412
#13 0x00000000004a9671 in PyEval_EvalCodeEx (co=0x2d50288, globals=<value optimized out>, locals=<value optimized out>, args=0x0, argcount=<value optimized out>, kws=<value optimized out>, kwcount=0, defs=0x0, defcount=0, closure=0x0) at ../Python/ceval.c:3000
#14 0x00000000004a9742 in PyEval_EvalCode (co=0x7fff314b8b20, globals=<unknown at remote 0x7fff314b8b10>, locals=<unknown at remote 0x7fff314b8b10>) at ../Python/ceval.c:541
#15 0x00000000004c9a0e in run_mod (fp=<value optimized out>, filename=0x7f1b0b11dde4 "SiebMaschine.py", start=<value optimized out>, globals=<value optimized out>, locals=<value optimized out>, closeit=1, flags=0x0) at ../Python/pythonrun.c:1339
#16 PyRun_FileExFlags (fp=<value optimized out>, filename=0x7f1b0b11dde4 "SiebMaschine.py", start=<value optimized out>, globals=<value optimized out>, locals=<value optimized out>, closeit=1, flags=0x0) at ../Python/pythonrun.c:1325
#17 0x00000000004a0c37 in builtin_execfile (self=<value optimized out>, args=<value optimized out>) at ../Python/bltinmodule.c:794
#18 0x00000000004a7c5e in call_function (f=Frame 0x339e480, for file ./../../bin/yade-cleanCompDebug, line 162, in runScript (script='SiebMaschine.py'), throwflag=<value optimized out>) at ../Python/ceval.c:3750
#19 PyEval_EvalFrameEx (f=Frame 0x339e480, for file ./../../bin/yade-cleanCompDebug, line 162, in runScript (script='SiebMaschine.py'), throwflag=<value optimized out>) at ../Python/ceval.c:2412
#20 0x00000000004a9671 in PyEval_EvalCodeEx (co=0x7f1b0b10a288, globals=<value optimized out>, locals=<value optimized out>, args=0x1, argcount=<value optimized out>, kws=<value optimized out>, kwcount=0, defs=0x0, defcount=0, closure=(<cell at remote 0x1f0bef8>, <cell at remote 0x1f0bf30>, <cell at remote 0x2010520>)) at ../Python/ceval.c:3000
#21 0x00000000004a7809 in fast_function (f=Frame 0x2221530, for file ./../../bin/yade-cleanCompDebug, line 177, in userSession (qt4=True, runScript=<function at remote 0x2d501b8>), throwflag=<value optimized out>) at ../Python/ceval.c:3846
#22 call_function (f=Frame 0x2221530, for file ./../../bin/yade-cleanCompDebug, line 177, in userSession (qt4=True, runScript=<function at remote 0x2d501b8>), throwflag=<value optimized out>) at ../Python/ceval.c:3771
#23 PyEval_EvalFrameEx (f=Frame 0x2221530, for file ./../../bin/yade-cleanCompDebug, line 177, in userSession (qt4=True, runScript=<function at remote 0x2d501b8>), throwflag=<value optimized out>) at ../Python/ceval.c:2412
#24 0x00000000004a9671 in PyEval_EvalCodeEx (co=0x7f1b0b10a300, globals=<value optimized out>, locals=<value optimized out>, args=0x7f1b0b111330, argcount=<value optimized out>, kws=<value optimized out>, kwcount=1, defs=0x130d5a8, defcount=1, closure=0x0) at ../Python/ceval.c:3000
#25 0x00000000004a7809 in fast_function (f=Frame 0x129ff80, for file ./../../bin/yade-cleanCompDebug, line 245, in <module> (), throwflag=<value optimized out>) at ../Python/ceval.c:3846
#26 call_function (f=Frame 0x129ff80, for file ./../../bin/yade-cleanCompDebug, line 245, in <module> (), throwflag=<value optimized out>) at ../Python/ceval.c:3771
#27 PyEval_EvalFrameEx (f=Frame 0x129ff80, for file ./../../bin/yade-cleanCompDebug, line 245, in <module> (), throwflag=<value optimized out>) at ../Python/ceval.c:2412
#28 0x00000000004a9671 in PyEval_EvalCodeEx (co=0x7f1b0b10a918, globals=<value optimized out>, locals=<value optimized out>, args=0x0, argcount=<value optimized out>, kws=<value optimized out>, kwcount=0, defs=0x0, defcount=0, closure=0x0) at ../Python/ceval.c:3000
#29 0x00000000004a9742 in PyEval_EvalCode (co=0x7fff314b8b20, globals=<unknown at remote 0x7fff314b8b10>, locals=<unknown at remote 0x7fff314b8b10>) at ../Python/ceval.c:541
#30 0x00000000004c9a0e in run_mod (fp=<value optimized out>, filename=0x7fff314bbcad "./../../bin/yade-cleanCompDebug", start=<value optimized out>, globals=<value optimized out>, locals=<value optimized out>, closeit=1, flags=0x7fff314b99b0) at ../Python/pythonrun.c:1339
#31 PyRun_FileExFlags (fp=<value optimized out>, filename=0x7fff314bbcad "./../../bin/yade-cleanCompDebug", start=<value optimized out>, globals=<value optimized out>, locals=<value optimized out>, closeit=1, flags=0x7fff314b99b0) at ../Python/pythonrun.c:1325
#32 0x00000000004c9c24 in PyRun_SimpleFileExFlags (fp=<value optimized out>, filename=0x7fff314bbcad "./../../bin/yade-cleanCompDebug", closeit=1, flags=0x7fff314b99b0) at ../Python/pythonrun.c:935
#33 0x000000000041a7ff in Py_Main (argc=185593984, argv=<value optimized out>) at ../Modules/main.c:572
#34 0x00007f1b09bf8c4d in __libc_start_main (main=<value optimized out>, argc=<value optimized out>, ubp_av=<value optimized out>, init=<value optimized out>, fini=<value optimized out>, rtld_fini=<value optimized out>, stack_end=0x7fff314b9ac8) at libc-start.c:226
#35 0x00000000004199f9 in _start ()
Aborted

-- 
Crash in last revision
https://bugs.launchpad.net/bugs/681018
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developers, which is the registrant for Yade.

Status in Yet Another Dynamic Engine: In Progress

Bug description:
The simulation starts and after couple seconds of simulation it crashes.

The problem is in O.bodies.erase(i.id)

Test script and backtrace are attached.