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Message #10129
Yade 1.00.0 released
The new stable Yade version 1.00.0 has been released. Between the
previous release 0.97.0 has been made 200 committs during 5 months: 200
files changed, 13703 insertions(+), 5683 deletions(-).
Packages for Ubuntu/Debian users will be shortly updated. Tarball is
available in Download section on Launchpad [1] and in Release section on
GitHub [2].
[1] https://launchpad.net/yade/+download
[2] https://github.com/yade/trunk/releases
Some important changes from developers, which where made toward this
release.
Bruno Chareyre:
The "Pore-scale Finite Volumes" method (PFV) for simulating the
coupling with a pore fluid is now available in the binary packages. It
comes as two engines: FlowEngine for rigid boundary conditions,
PeriodicFlowEngine for periodic boundary conditions. The fluid can be
simulated as strictly incompressible, or compressible, with dedicated
integration schemes for each case. Lubrication forces are also present
as an optional feature
Christian Jakob:
- An integration scheme for inertia tensors of clumps is included.
Inertia/masses/volumes of clumps are now updated automatically, when
calling one of the clump creation/modification methods.
- Modifications in addToClump() method now allows to add a list of bodies.
- A new example shows how to add buoyancy force on spheres and clumps.
Jérôme Duriez and Luc Scholtes:
A new contact law is introduced in order to simulate jointed rock
masses. It allows to reproduce a cohesive-frictional behaviour of the
rock matrix, and to take into account pre-existing fractures (joints) as
discontinuity surfaces (their behaviour may be also
cohesive-frictional). A smooth contact logic can be applied to favour
slip along these surfaces regardless of the roughness induced by sphere
geometry and model discretization. Examples and vizualisation facilities
are also introduced.
François Kneib
The interaction between two Grids is now implemented, through the
GridConnection-GridConnection contact.
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Thanks all developers and other contributors for this work!
==================================================
The complete changelog:
yade-1.00.0
Sun Sep 29 23:10:48 2013 +0200
Anton Gladky (64):
Remove release file.
Add documentation, how to render particle with ParaView`s
PointSprite plugin.
Fix spelling errors.
Add Changelog.
Add different capillar models into ViscoElasticPM.
Add links to equations, consider not only monodisperse particles.
Fix s parameter for Willet-formulation of capillar.
Add one more critical-calculation to capillar model.
Cleanings in viscoelastic capillar modell.
Move capillar calculation into another function not to overload VPM.
Modify Weigart`s model.
Update equations for Weigart`s capillar model.
Update capillar equations and names of schemas.
Move references to a references.bib.
Add comment on liquid bridges.
Fix some warnings (clang).
Fix compilation.
Implement rotational resistance in ViscoElasticPM.
Add massMultiply-parameter to ViscoElasticPM to have an
opportunity to set kn, kt, cn and ct without multiplication on mass.
Implement Rabinovich`s capillar model.
Fix wrong calculation of the average rotational resistance.
Split ViscoelasticPM on capillar and dry parts.
Prevent devision by 0 in capillar Rabinovich model.
Prepare for flowengine compilation.
Merge libplugins, libsupport and libcore in libyade.
Fix FindCholmod.cmake.
Fix compilation of FlowBoundingSphere.ipp
Replace Cholmod-Feature by LinSolv.
Minor fix in CMakeList (FlowEnginge).
Implement PID controller to have a servo-engine.
Fix tests due to failing clumps-autotests.
Use combinedengine for ServoPIDController.
Fix hopefully clumps-autotests.
Add LudingPM.
Merge branch 'ndyck'
Add an example for LudingPM.
Use libyade again. Revert Bruno`s revert.
Fix configuration issue with CHUNKSIZE>0.
Drop RockPM.
Remove ParticleSizeDistrbutionRPMRecorder.
Remove CohesiveStateRPMRecorder.
Show PFVflow and LinSolv in disabled features, if they are disabled.
Include loki-library dirs and link against them. Fixes compilation
on HPC TU Freiberg.
Set LinSolv and PFVFLOW ON by default.
Add recommended build-dependency for LinSolv and PFVFlow into
documentation.
Replace ifndef/define-constructions by "#pragma once" in
lib/triangulation, where it is possible.
Minor fix in capillary models in ViscoelasticPM.
Add [Pournin2001] into the description of ViscoelasticPM.
Minor fix in calculation s_crit in ViscoelasticPM.
Add information about github-hosting into the main page.
Add a notification to the screen, whether the current build is
debugbuild.
Remove explicit linking of libstdcxx.
Use skipScripts variable to skip some scripts on check-tests.
Skip temporarly DEM-PFV-check.py to let daily-builds packages be
built.
Remove kde-files from the trunk.
Minor fix in installation section of documentation.
Remove Fedora list package from documentation. The list is
unsupported.
Add Antypov2011 reference and some links in Hertz-Mindlin model.
Fix some compilation warnings (GCC).
Replace libqglviewer-qt4-dev on libqglviewer-dev in installation
section.
Fix errors in ForceContainer, detected by clang.
Fix compilation error.
Add export into LIGGGHTS-format.
1.00.0
Bruno Chareyre (68):
+1 journal article
Add the color of the periodic cell a registered attribute.
- fix a bug that would let the capillary tables empty when
postLoad was not triggered
Add function getCapillaryStress(), equivalent of getStress() but
for capillary forces
-code cleaning
fix a latex equation
FlowEngine: exclude corner cases when listing constrictions sizes
along the void path
+1 article
-fix url of an article
+4 journal papers
+1 journal article
- add "LINSOLV" source code for DEM-PFV coupling with direct
sparse solvers
add strainRate attribute to TriaxialStressController + fix bug in
example script
Revert "Merge libplugins, libsupport and libcore in libyade."
Cause: the new cmake system breaks buildbot and does not work for
chunkSize>0
- add getSceneAsString() to pass scenes between instances without
going through the hard drive
fix CMakeList for chunkSize>=1
- enable load/save from/to python strings with O.sceneToString and
O.stringToScene (for communication between parallel instances of yade)
-fix the return type of stringToScene()
clean the flow code (part 1)
cleaning the flow code (smallfix of part 1)
cleaning the flow code (part2)
cleaning the flow code (part3 and last)
-first example script for the fluid coupling with the DEM-PFV method
- new conference and journal papers
fixed reference
+1 PhD thesis
- more documentation of TesselationWrapper, with a section in user
manual and pointer to published equations.
git ignore changes to .gitignore
undo previous change in gitignore, not the right way to fix
Turn a LOG_DEBUG into LOG_ERROR/return, to escape segfault. (ref:
https://bugs.launchpad.net/bugs/1208878)
Add an optional argument to O.forces.f() and O.forces.t() to get
correct forces on clumps.
doc improvement and more cross-links for TesselationWrapper and
FlowEngine
-enable user defined forces on bodies applying permanently (with
updated user manual)
+1 conference paper
-workaround https://bugs.launchpad.net/yade/+bug/1183402#3,
allowing startup imports with optional argument example: $yade
-lscipy.interpolate
-fix '-l' command line option (no import lib was crashing)
fix uninitialized member of ForceContainer
fix compile warnings (unused variables)
- smallfixes in documentation
fix FlowEngine docstring
fix duplicate bib reference
small fix in bib entries
remove duplicate bib reference
commit small fix and update in bib files
make default FlowEngine::permeabilityFactor less absurd (crashing
by default sucks)
regression (check-)test for FlowEngine
remove Dem3Dof form Yade (also eudoxos module, mostly based on
Dem3Dof)
- remove Dem3Dof from documentation
remove eudoxos from build system (+ remove from VTKRecorder, that
was left behind)
remove Dem3Dof from a docstring
remove Dem3Dof from alias
various fixes and improvements in checkTests
- increase verbosity of DEM-PFV checkTest
remove some debugging code left in chekList.py
make sure FlowEngine has been compiled before trying the checkTest
DEM-PFV, as suggested by Klaus
make the DEM-PFV checktest fully determinist with a data file for
initial positions
new attributes in FlowEngine to access low level cholmod/metis data
\#include <cholmod.h> in FlowEngine.cpp (why is it not needed on
lucid?!)
add #ifdef LINSOLV guards in appropriate places in case someone
(e.g. buildbot) compiles without cholmod
one more #ifdef LINSOLV guard
add a cmake path for metis.h on wheezy
Return a warning at startup if X rendering is unavailable despite
gui is required.
User manual: correct the meaning of body.dynamic + remove utils.
prefixes
Typo fix in prog.rst
Fix sphinx warning (no :gui: role)
yadeSphinx.py: remove eudoxos module from the build list
-remove empty section of doc: External modules
revert 3d7ca8577 (doc/current hyperlink), see also
https://lists.launchpad.net/yade-dev/msg10035.html.
Chiara Modenese (1):
Prevent the normal force become negative when viscous damping is
applied.
Christian Jakob (23):
added new example showing implementation of buoyancy
small fix in new example from previous commit
small fix of description in new buoyancy example
include integration scheme for inertia tensors of clumps;
inertia/masses/volumes of clumps are updated automatically by call of
updateProperties method; removed adaptClumpMasses method and example script
Merge branch 'master' of github.com:yade/trunk
make getRoundness() faster
shorten the code of Clump.cpp: switched
getClumpVolumeAndAdaptInertia() method into updateProperties()
small fix of a comment
small fix in an example script
Merge branch 'master' of github.com:yade/trunk
remove unused #include in Clump.cpp
limit number of cubes for clump inertia integration scheme to
1000000; avoids worst case scenario with R_clump_member(s)<<R_clump
shorten code of Clump.cpp; improve inertia intergration scheme
undo unwanted changes in addToClump example from previous commit
bug fix of a previous commit
set maximum number of cubes for clump inertia integration scheme
to 3375000 in Clump.cpp
fix inertia calculation and clump test
add output of inertia and mass to addToClump-example.py
Merge branch 'master' of github.com:yade/trunk
Merge branch 'master' of github.com:yade/trunk
Merge branch 'master' of github.com:yade/trunk
fix colors in releaseFromClump-example.py
improve addToClump() method, make it possible to add body lists
Francois Kneib (3):
Fix bug #1161847 : Cannot create two clumpClouds in the same
simulation (https://bugs.launchpad.net/yade/+bug/1161847). Modified
makeClumpCloud(...) in SpherePack.cpp : the random generator was wrong,
fixed it.
Make the interaction between two Grids possible. It comes with a
set of new classes, all in Grid.cpp/hpp : - The geometry of
interaction : GridCoGridCoGeom - Its instanciation :
Ig2_GridConnection_GridConnection_GridCoGridCoGeom - An elastic
frictional law : Law2_GridCoGridCoGeom_FrictPhys_CundallStrack
Lots of changes in the inelastic cohesive set of classes. -
correct a lot of bugs and comment the inelastic cohesive law :
pkg/dem/Law2_ScGeom6D_InelastCohFrictPhys_CohesionMoment - change
some variables names and comments : pkg/dem/InelastCohFrictMat
pkg/dem/InelastCohFrictPhys
pkg/dem/Ip2_2xInelastCohFrictMat_InelastCohFrictPhys
Jan Stránský (14):
added --diable-pynotify to yade-batch Removed #include
Shop.hpp from Cell.*pp added area attribute to Facet
added triaxal test on cylinder example
Created classes for bubble interaction according to question #230574
Tetra modification (Ig2_Tetra_Tetra_TTtraSimpleGeom,
Law2_TTetraSimpleGeom_NormPhys_Simple, modified GL functor, examples,
utils.tetra) added Ip2_ElastMat_... functors fixed bug in
utils.kineticEnergy for aspherical bodies
Merge branch 'master' of github.com:yade/trunk
added utils.UnstructuredGrid class for manipulating (external
forces evaluation and positin changes) of FEM-like triangular and
tetrahedral meshes hopefully fixed CGAL compilation problem in
pkg/dem/Tetra.*pp reported by Klaus
Improved documentation about O.load and O.save, motivated by
question #230900
export.VTKExporter improvement (intaractions export), SVD matrix
decomposition in python, Peri3dController improvement (compatibility
with O.save/O.load)
doc improvement of Peri3dController
Merge branch 'master' of http://github.com/yade/trunk
midified exporter.VTKExporter for correct interactions export in
periodic case
ConcretePM: modified damage tensor computetion, added
elasticEnergy function, added export.VTKExporter.exportInteractions
function, modified ymport.iges function
Merge branch 'master' of http://github.com/yade/trunk
Modifying code to enable compilation with QUAD_PRECISION without
errors (does not work yet for CGAL enabled)
Jerome Duriez (7):
- few changes in comments in JointedCohesiveFrictionalPM.* -
typos corrected in doxygen and sphinx docs of TriaxialTest (there was
some "Trixial" instead of "Triaxial") - correction of typo, broken
links, and add of two precisions in the doc of a function of pack.py
Typo in NewtonIntegrator doc
Correction of link-syntax in doc of
Law2_ScGeom_JCFpmPhys_JointedCohesiveFrictionalPM
Typo and redundancies corrected in doc of Functor.label
Typo in a figure legend
Precision in the doc relative to dt (6 is the maximal contact
number in 2D)
Correction of a broken link in GSTS doc
Klaus Thoeni (11):
various wire contact laws available now, add reference with
details, add a check script for the wire model
various wire contact laws available now (new version), add
reference with details
resolve clash between utils.box and box loaded from pylab
correct some spelling and make some example scripts working (more
checks needed)
move one level up
use returnSpherePack=True in randomDensePack
fix some typos and links in documentation
Merge branch 'master' of github.com:yade/trunk
make script faster
introduce tolerence in overlap check for intersecting spheres
add MatchMaker for friction angle
Luc Scholtes (4):
Merge branch 'master' of github.com:yade/trunk
cleanup in yade publications list
remove CohesiveFrictionalPM from trunk
add a new class for modelling jointed media
(JointedCohesiveFrictionalPM) and examples to illustrate how to use it
(examples/jointedCohesiveFrictionalPM/)
new reference added
Nolan Dyck (2):
Updated function descriptions for BubbleMat
Merge branch 'master' of https://github.com/yade/trunk
Raphaël Maurin (1):
Modify GlobalStiffnessTimeStepper for visco-elastic contact law.
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