yade-dev team mailing list archive

[ntthangvn@xxxxxxxxx]

Dear Anton,
Thank you so much for your update. It's the great news. We will work hard for the development of YADE in the future! 

Cheers, 
Thang

Sent from my BlackBerry 10 smartphone.
  Original Message  
From: Anton Gladky
Sent: Wednesday, 15 June 2016 05:00
To: yade-users@xxxxxxxxxxxxxxxxxxx
Cc: yade-dev
Subject: [Yade-dev] Yade 2016.06a released

Dear Yade users and developers,

After almost 8 months of development I am glad to announce
the next Yade version 2016.06a. The complete changelog
you will find as always at the end of this message.

The versioning of releases is changed and now is in the
form YYYY.MMx. Where x is the letter, which can be
changed by minor updates in the stable releases.

Thanks all for contributions!

Anton

==================================================
yade-2016.06a
Tue, Jun 14 20:30:53 2016 +0200

Anton Gladky (88):
Remove release.
Clean some unused macroses (old wm3-stuff)
Remove some global headers
Raise minimal boost version to 1.47
Add -DNDEBUG if compiling in release mode
Tiny code refactoring
Clean some warnings and old stuff.
Return removed header back.
Fix warning in newer matplotlib.
Drop old commented stuff in python-scrips.
Remove flags and preSteps from scene
Remove deprecated findBoundDispatcherInEnginesIfNoFunctorsAndWarn
Remove PISC_DEBUG.
Fix typo in installation sections of doce. Thanks to Jan.
Export normal and viscous part of the visco-elastic contact
Remove confusing part in installation part of documentation regarding Qt5.
Fix typo in CMakeLists
Tiny updates of examples of LudingPM.
Fix compilation warnings.
Update formatting in SpherePack
Fix an order of calculation of c in SpherePack
Fix some compilation warnings.
Fix cappitalization typo in Lapack (case-sensitive in this case).
Respect VTK6 in PotentialParticles.
Add .travis.yml for CI.
Remove version restriction on sphinx.
Use trusty as build-env.
Add -y parameter to apt-get install.
Fix numpy import on travis.
Fix segfault during save/load of CapViscModels
Add one more check-script (capillary models)
Fix typo in check-script.
Fix crash in Ig2_Facet_Polyhedra_PolyhedraGeom
vtkExporter: increase number of leading zeros to 8
Move implementation of methods of ForceContainer in cpp.
Split implementation of ForceContainer in parallel and serial.
Add zero-forces to the youngest body after simulation load.
Closes LP:1560171
Drop parallel execution in replaceByClumps. Closes LP:1559098
Add import of polyhedras from the file.
Add an opportunity to shift, scale and rotate imported polyhedrons
Minor fixes in Polyhedra_splitter.
Fix division by zero crash in Polyhedra
Add CGAL_DISABLE_ROUNDING_MATH_CHECK, -frounding-math when CGAL
is enabled.
Fix some formatting issues.
Non-invasive fixes in polyhedra_splitter.
Get max-min coefs in polyhedra_splitter simpler.
Use tuple as a parameter for SplitPolyhedraDouble
Add check script for polyhedra crash.
Use explicitly -DNDEBUG instead of CMAKE_CXX_FLAGS_RELEASE
Check isnan in some coordinates before calling CGAL.
Minor formatting fixes in Polyhedra.
Add check-script for save/load of clumps.
Disable checkPolyhedraCrush. It is unstable now.
Fix checkPolyhedraCrush
Remove polyhedra_utils import from "ymport"
Add prefix std:: to isnan and isinf.
Update checkPolyhedraCrush
Update files for ppa-infrastructure.
Undef NDEBUG in all polyhedra files.
Add pause for checkSaveLoadClumps to escape race condition.
Use variadic arguments in DynLibDispatcher.
Fix crash in polyhedra, if maxFs=0.
Fix checkPolyhedraCrush (remove qt)
Remove unused functionality in Dispatcher.
Set Qt5 by default.
Add mathcmaker for normalCohesion and shearCohesion.
Split QGLViewer.cmake on qt4 and qt5 versions.
Add .gitattributes to ignore line endings.
Migrate buildppa to python3.
Replace some "#define"(s) by functions.
Remove some machine-specific items in documentation.
Add unit test for matchmaker.
Replace vector by unordered_map data structure in Matchmaker.
Minor fix in documentation.
Replace some "defines" by functions.
Remove numpy.hpp.
Fix bug in polyhedra_splitter.
Some cosmetic fixes in core-files.
Enable C++14.
Revert 2dc99 and ed8dcb.
Use unordered_map instead of map for MapId2IntrT
Use unordered_map only for Boost >= 1.56
Back to C++11.
Revert using unordered_map in Body.
Scale mass and inertia in spheresModify.
Reduce size of flags in Bounds of InsertionSortCollider
Fix bug in MatchMaker.
Add RELEASE file.

Bruno Chareyre (16):
add labels to default engines for easier showcases
fix ambiguous syntax, fixing https://bugs.launchpad.net/bugs/1514477
introduce 2nd edition of the documentation and contact for
consuting (in homepage)
update the webpage about citation with 2nd edition, add 1st
edition as an external reference, update pdf metadata
fix one DOI of the 2nd ed. documentation
Add missing toctree's for the citable book versions
fix typo in installation page
fixed DOI
fix some hyperlinks pointing to the old geo.hmg.inpg.fr
declare mask attribute for FlowEngine, fixes a compile error
use FlowEngine's mask consistently
implement standalone plastic-shear energy counter in
CohesiveFrictional Law2
define constrictions with consistent cell's ids (see
https://answers.launchpad.net/yade/+question/288118)
fix a compile error
update boost version in prerequisites (installation page)
Documentation: include unp in the equations of
Law2_ScGeom6D_CohFrictPhys_CohesionMoment

Burak Er (1):
Implement deformable elements

ChiaWeng Boon (1):
Commit Potential Particles: non-spherical particles for DEM

Francois Kneib (8):
TesselationWrapper : add a security that prevents user to access
the strain tensor of a particle (aka deformation) outside its
boundaries.
Fix a tensor access in local displacement calculation.
Fix a bug in Tesselationwrapper: one of the bounding planes was
not rightly positionned.
Fix in TesselationWrapper: allow the tesselation to compute
right triangulation in the boundaries of a periodic boundaries
conditions simulation.
Add 5 setters for bodies pos,vel,ori,angVel,color to workaround
the memory leak bug when assigning attributes from python (see
https://bugs.launchpad.net/yade/+bug/1041084). They are not supposed
to stay in the code for a long period (remove them when the bug is
solved), but are useful in sims that massively change values of
python/c++ binded attributes.
Simplify one line in TesselationWrapper.
Fix the debug build that failed to compile due to a mistake in
pkg/dem/Polyhedra.cpp
Fix the inspector GUI for Qt5, thanks to Mark S. Bentley.

Jan Stránský (30):
Merge pull request #47 from booncw/master
Potential particles modification
Merge branch 'master' of github.com:yade/trunk
Potential particles modifications
added forgotten file from previous commit
Modified python interface for O.forces.addF(...,permanent=True)
and addT(...,permanent=True)
fixed some warnings during docs build
Added frictAngle MatchMaker for Ip2_FrictMat_CpmMat_FrictPhys
set b.aspherical=True in utils.polyhedron and utils.tetraPoly
Polyhedra modification
Added a material model for mortar layer
Polyhedra.setVertices improvement, preventing memory leaks
(question #290947 and bug #1570679)
Interaction::reset explicitly resets also its functorCache
Fixed a strange bug in
Law2_PolyhedraGeom_PolyhedraPhys_Volumetric and shearForce
Added useRef parameters to VTKExporter.exportPolyhedra and
VTKExporter.exportInteractions
Modified MortarMat
Merge branch 'master' of github.com:yade/trunk
fixed computation of shearForce in
Law2_PolyhedraGeom_PolyhedraPhys_Volumetric
added and modified examples for MortarMat
Merge branch 'master' of github.com:yade/trunk
added MatchMaker for E in Ip2_CmpMat_CpmMat_CpmPhys
Fixed a bug in pack.inSphere, related to question #292846
Merge branch 'master' of github.com:yade/trunk
VTKRecorder, added orientation for box export (question #293635)
Modification of CPM
Fixed ymport.textPolyhedra function (bug #1582775)
added x_y_z_r_attrs format to ymport.textExt
Added an example for generation of 'agglomerate' packing
Fixed Law2_Cpm default parameter to keep backward compatibility
(question #294657)
Better default value from previous commit

Jerome Duriez (12):
+1 journal paper
Incorporating previous +1 paper in JCFpm doc
+ another journal paper
makeCloud doc changes with the hope to make it clearer for all users
Doc of TriaxStressController.porosity precised
Doc improvements of previous commit improved
Last doc improvement of previous commit
normalForce and shearForce convention (sustained by #2) precised in docs
fabricTensor() now ok for non-periodic simulations. revertSign
attribute removed as well
getSpheres*() functions: getting rid of dynamic test, see
http://www.mail-archive.com/yade-dev@xxxxxxxxxxxxxxxxxxx/msg11956.html
fabricTensor(): unify the behavior regarding boundary
interactions whether split=0 or 1: they are now disregarded in both
cases
fabricTensor(): re introducing all kind of interactions in the
loop, with the new possibility defining a cutoff. See
http://www.mail-archive.com/yade-dev@xxxxxxxxxxxxxxxxxxx/msg11982.html

Klaus Thoeni (23):
fix some typos and add some more details
fix Anton's previous commit (make doc was not working)
fix documentation for Note
some polishing
gts shift and scale apparently only take three float values, hence changed
Merge branch 'master' of github.com:yade/trunk
move grid specific functions in separate module and add some more doc
add some more examples, show same functionality as with chained cylinders
update doc
add Grid and pFacet references
Initial version of the PFacet implementation (contributed by
Anna Effeindzourou)
Examples for creating pfacets
update tests according to new gridpfacet module
remove postLoad function as not used, this fixes as well
serialization problem in --test
better handling of double contacts, get gid of function ScGem goOneWay
improved documentation
add definition for cylinder and cylinderConnection basen on
gridConnection, add warning for chainedCylinder usage
examples for cylinder and cylinderConnection
example with many cylinders and 2 pFacets
QT5 is default now
correct some typos
similar to example in chained-cylinder-roots.py
add reference

Raphael Maurin (6):
HydroForceEngine: modify the turbulent fluctuations formulation
and add a new DRW model The turbulent fluctuations model takes now the
form of a function of HydroForceEngine and is not anymore called from
a flag. In addition, an alternative DRW model has been added.
HydroForceEngine: adapt the averageProfile function for
bi-disperse mixtures. Evaluate the streamwise, spanwise and
wall-normal average particle velocity for the two defined types of
particles.
HydroForceEngine: modify turbulent fluctuation model. Add a
fluctuation along the spanwise (y) direction. Reset the fluctuation to
zero when the particle is out of the flow (fix a bug) Comment a bit
more the turbulentFluctuation function
HydroForceEngine, hpp file completing the last commit
Add references
add a link in the publications

bchareyre (1):
compute external work correctly in TriaxialStressController

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