yade-dev team mailing list archive

[Klaus Thoeni <klaus.thoeni@xxxxxxxxx>]

Hi guys,

I remember a discussion with a CGAL problem to get yade ready for 18.04
LTS. From the discussion it looks that everything is solved. However, I
just did a fresh install of Kubuntu 18.04 and tried to compile the code
(latest trunk version).

cmake went fine but compilation didn't work as expected. I got an error
related to some CGAL commands used in DFNFlow.cpp:

/home/yade/YADE-git/trunk/pkg/pfv/DFNFlow.cpp: In member function ‘void
DFNFlowEngine::interpolateCrack(TemplateFlowEngine_DFNFlowEngineT<DFNCellInfo,
DFNVertexInfo, CGT::_Tesselation<CGT::TriangulationTypes<DFNVertexInfo,
DFNCellInfo> >, DFNBoundingSphere>::Tesselation&,
TemplateFlowEngine_DFNFlowEngineT<DFNCellInfo, DFNVertexInfo,
CGT::_Tesselation<CGT::TriangulationTypes<DFNVertexInfo, DFNCellInfo> >,
DFNBoundingSphere>::Tesselation&)’:
/home/yade/YADE-git/trunk/pkg/pfv/DFNFlow.cpp:216:136: error: no match for
‘operator-’ (operand types are
‘CGAL::Regular_triangulation_vertex_base_3<CGAL::Epick,
CGAL::Triangulation_ds_vertex_base_3<CGAL::Triangulation_data_structure_3<CGAL::Alpha_shape_vertex_base_3<CGAL::Epick,
CGAL::Triangulation_vertex_base_with_info_3<DFNVertexInfo, CGAL::Epick,
CGAL::Regular_triangulation_vertex_base_3<CGAL::Epick> >,
CGAL::Boolean_tag<false>, CGAL::Boolean_tag<false> >,
CGAL::Alpha_shape_cell_base_3<CGAL::Epick,
CGAL::Triangulation_cell_base_with_info_3<DFNCellInfo, CGAL::Epick,
CGAL::Regular_triangulation_cell_base_3<CGAL::Epick> >,
CGAL::Boolean_tag<false>, CGAL::Boolean_tag<false> >, CGAL::Sequential_tag>
> >::Point {aka CGAL::Weighted_point_3<CGAL::Epick>}’ and ‘const
CGAL::Origin’)
   if (newCell->info().fictious()==0) for (int k=0;k<4;k++) center = center
+ 0.25*(Tes.vertex(newCell->vertex(k)->info().id())->point()-CGAL::ORIGIN);

~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~


/home/yade/YADE-git/trunk/pkg/pfv/DFNFlow.cpp:218:71: error: no matching
function for call to ‘CGAL::Regular_triangulation_3<CGAL::Epick,
CGAL::Triangulation_data_structure_3<CGAL::Alpha_shape_vertex_base_3<CGAL::Epick,
CGAL::Triangulation_vertex_base_with_info_3<DFNVertexInfo, CGAL::Epick,
CGAL::Regular_triangulation_vertex_base_3<CGAL::Epick> >,
CGAL::Boolean_tag<false>, CGAL::Boolean_tag<false> >,
CGAL::Alpha_shape_cell_base_3<CGAL::Epick,
CGAL::Triangulation_cell_base_with_info_3<DFNCellInfo, CGAL::Epick,
CGAL::Regular_triangulation_cell_base_3<CGAL::Epick> >,
CGAL::Boolean_tag<false>, CGAL::Boolean_tag<false> >,
CGAL::Sequential_tag>, CGAL::Default>::locate(Point)’
   CellHandle oldCell = Tri.locate(Point(center[0],center[1],center[2]));
                                                                       ^
In file included from /usr/include/CGAL/Regular_triangulation_3.h:45:0,
                 from
/home/yade/YADE-git/trunk/lib/triangulation/RegularTriangulation.h:13,
                 from
/home/yade/YADE-git/trunk/lib/triangulation/Tesselation.h:9,
                 from
/home/yade/YADE-git/trunk/pkg/dem/TesselationWrapper.hpp:15,
                 from
/home/yade/YADE-git/build/pkg/pfv/FlowEngine_DFNFlowEngineT.hpp:38,
                 from /home/yade/YADE-git/trunk/pkg/pfv/DFNFlow.cpp:20:
/usr/include/CGAL/Triangulation_3.h:1012:3: note: candidate:
CGAL::Triangulation_3<GT, Tds, Lock_data_structure>::Cell_handle
CGAL::Triangulation_3<GT, Tds, Lock_data_structure>::locate(const Point&,
CGAL::Triangulation_3<GT, Tds, Lock_data_structure>::Vertex_handle, bool*)
const [with GT = CGAL::Epick; Tds_ =
CGAL::Triangulation_data_structure_3<CGAL::Alpha_shape_vertex_base_3<CGAL::Epick,
CGAL::Triangulation_vertex_base_with_info_3<DFNVertexInfo, CGAL::Epick,
CGAL::Regular_triangulation_vertex_base_3<CGAL::Epick> >,
CGAL::Boolean_tag<false>, CGAL::Boolean_tag<false> >,
CGAL::Alpha_shape_cell_base_3<CGAL::Epick,
CGAL::Triangulation_cell_base_with_info_3<DFNCellInfo, CGAL::Epick,
CGAL::Regular_triangulation_cell_base_3<CGAL::Epick> >,
CGAL::Boolean_tag<false>, CGAL::Boolean_tag<false> >,
CGAL::Sequential_tag>; Lock_data_structure_ = CGAL::Default;
CGAL::Triangulation_3<GT, Tds, Lock_data_structure>::Cell_handle =
CGAL::internal::CC_iterator<CGAL::Compact_container<CGAL::Alpha_shape_cell_base_3<CGAL::Epick,
CGAL::Triangulation_cell_base_with_info_3<DFNCellInfo, CGAL::Epick,
CGAL::Regular_triangulation_cell_base_3<CGAL::Epick,
CGAL::Triangulation_cell_base_3<CGAL::Epick,
CGAL::Triangulation_ds_cell_base_3<CGAL::Triangulation_data_structure_3<CGAL::Alpha_shape_vertex_base_3<CGAL::Epick,
CGAL::Triangulation_vertex_base_with_info_3<DFNVertexInfo, CGAL::Epick,
CGAL::Regular_triangulation_vertex_base_3<CGAL::Epick> >,
CGAL::Boolean_tag<false>, CGAL::Boolean_tag<false> >,
CGAL::Alpha_shape_cell_base_3<CGAL::Epick,
CGAL::Triangulation_cell_base_with_info_3<DFNCellInfo, CGAL::Epick,
CGAL::Regular_triangulation_cell_base_3<CGAL::Epick> >,
CGAL::Boolean_tag<false>, CGAL::Boolean_tag<false> >, CGAL::Sequential_tag>
> >, CGAL::Hidden_points_memory_policy<CGAL::Boolean_tag<true> >,
std::__cxx11::list<CGAL::Weighted_point_3<CGAL::Epick>,
std::allocator<CGAL::Weighted_point_3<CGAL::Epick> > > > >,
CGAL::Boolean_tag<false>, CGAL::Boolean_tag<false> >, CGAL::Default,
CGAL::Default, CGAL::Default>, false>; CGAL::Triangulation_3<GT, Tds,
Lock_data_structure>::Point = CGAL::Weighted_point_3<CGAL::Epick>;
CGAL::Triangulation_3<GT, Tds, Lock_data_structure>::Vertex_handle =
CGAL::internal::CC_iterator<CGAL::Compact_container<CGAL::Alpha_shape_vertex_base_3<CGAL::Epick,
CGAL::Triangulation_vertex_base_with_info_3<DFNVertexInfo, CGAL::Epick,
CGAL::Regular_triangulation_vertex_base_3<CGAL::Epick,
CGAL::Triangulation_ds_vertex_base_3<CGAL::Triangulation_data_structure_3<CGAL::Alpha_shape_vertex_base_3<CGAL::Epick,
CGAL::Triangulation_vertex_base_with_info_3<DFNVertexInfo, CGAL::Epick,
CGAL::Regular_triangulation_vertex_base_3<CGAL::Epick> >,
CGAL::Boolean_tag<false>, CGAL::Boolean_tag<false> >,
CGAL::Alpha_shape_cell_base_3<CGAL::Epick,
CGAL::Triangulation_cell_base_with_info_3<DFNCellInfo, CGAL::Epick,
CGAL::Regular_triangulation_cell_base_3<CGAL::Epick> >,
CGAL::Boolean_tag<false>, CGAL::Boolean_tag<false> >, CGAL::Sequential_tag>
> > >, CGAL::Boolean_tag<false>, CGAL::Boolean_tag<false> >, CGAL::Default,
CGAL::Default, CGAL::Default>, false>]
   locate(const Point & p, Vertex_handle hint,
   ^~~~~~


The installed version of CGAL is 4.11, see below:

yade@ubuntu-yade:~$ dpkg -l | grep cgal
ii  libcgal-dev:amd64
4.11-2build1                        amd64        C++ library for
computational geometry (development files)
ii  libcgal13:amd64
4.11-2build1                        amd64        C++ library for
computational geometry

So my question here is if someone else run into this problem or not. And
did someone fix it?

Note that when deactivating PFVFLOW and TWOPHASEFLOW compilation is just
fine.

Once this is solved I would be happy to update the install instructions for
18.04 as this is probably what most users will be using now. But I am not
familiar with DFNFlow nor CGAL.

Cheers,
Klaus