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Re: [Question #166257]: question on CapillaryPhys

To: yade-users@xxxxxxxxxxxxxxxxxxx
From: Christian Jakob <question166257@xxxxxxxxxxxxxxxxxxxxx>
Date: Fri, 29 Jul 2011 12:31:19 -0000
Reply-to: question166257@xxxxxxxxxxxxxxxxxxxxx
Sender: bounces@xxxxxxxxxxxxx
Question #166257 on Yade changed:
https://answers.launchpad.net/yade/+question/166257

Christian Jakob posted a new comment:
I recompiled yade and started calculation again:

me@debian ~/YADE/my-yade-projects/capillaryPhys-test > yade --debug capillaryPhys-example.py 
Welcome to Yade bzr2877 (debug build)
TCP python prompt on localhost:9000, auth cookie `ecdkas'
XMLRPC info provider on http://localhost:21000
Running script capillaryPhys-example.py
python: /usr/include/boost/smart_ptr/shared_ptr.hpp:418: T* boost::shared_ptr< <template-parameter-1-1> >::operator->() const [with T = capillarylaw]: Zusicherung »px != 0« nicht erfüllt.
SIGSEGV/SIGABRT handler called; gdb batch file is `/tmp/yade-xoqkNe/tmp-0'
GNU gdb (GDB) 7.0.1-debian
Copyright (C) 2009 Free Software Foundation, Inc.
License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>
This is free software: you are free to change and redistribute it.
There is NO WARRANTY, to the extent permitted by law.  Type "show copying"
and "show warranty" for details.
This GDB was configured as "x86_64-linux-gnu".
For bug reporting instructions, please see:
<http://www.gnu.org/software/gdb/bugs/>.
[Thread debugging using libthread_db enabled]
[New Thread 0x7fc271ec1700 (LWP 23743)]
[New Thread 0x7fc27bfff700 (LWP 23742)]
[New Thread 0x7fc280a34700 (LWP 23741)]
0x00007fc2a335c7dd in nanosleep () from /lib/libpthread.so.0
No symbol "info" in current context.

Thread 4 (Thread 0x7fc280a34700 (LWP 23741)):
#0  0x00007fc2a221f8d3 in select () from /lib/libc.so.6
#1  0x00000000004f7fd3 in ?? ()
#2  0x00000000004a7ba5 in PyEval_EvalFrameEx ()
#3  0x00000000004a95c1 in PyEval_EvalCodeEx ()
#4  0x00000000004a7752 in PyEval_EvalFrameEx ()
#5  0x00000000004a95c1 in PyEval_EvalCodeEx ()
#6  0x0000000000538a10 in ?? ()
#7  0x000000000041ef47 in PyObject_Call ()
#8  0x0000000000427c1f in ?? ()
#9  0x000000000041ef47 in PyObject_Call ()
#10 0x00000000004a1a53 in PyEval_CallObjectWithKeywords ()
#11 0x00007fc280a3ecab in ?? () from /usr/lib/pymodules/python2.6/sip.so
#12 0x00007fc280ce5498 in ?? () from /usr/lib/pymodules/python2.6/PyQt4/QtCore.so
#13 0x00007fc280d1568a in ?? () from /usr/lib/pymodules/python2.6/PyQt4/QtCore.so
#14 0x00007fc29e504e15 in ?? () from /usr/lib/libQtCore.so.4
#15 0x00007fc2a33548ba in start_thread () from /lib/libpthread.so.0
#16 0x00007fc2a222602d in clone () from /lib/libc.so.6
#17 0x0000000000000000 in ?? ()

Thread 3 (Thread 0x7fc27bfff700 (LWP 23742)):
#0  0x00007fc2a221f8d3 in select () from /lib/libc.so.6
#1  0x00000000004f7fd3 in ?? ()
#2  0x00000000004a7ba5 in PyEval_EvalFrameEx ()
#3  0x00000000004a95c1 in PyEval_EvalCodeEx ()
#4  0x00000000004a7752 in PyEval_EvalFrameEx ()
#5  0x00000000004a95c1 in PyEval_EvalCodeEx ()
#6  0x0000000000538a10 in ?? ()
#7  0x000000000041ef47 in PyObject_Call ()
#8  0x0000000000427c1f in ?? ()
#9  0x000000000041ef47 in PyObject_Call ()
#10 0x00000000004a1a53 in PyEval_CallObjectWithKeywords ()
#11 0x00007fc280a3ecab in ?? () from /usr/lib/pymodules/python2.6/sip.so
#12 0x00007fc280ce5498 in ?? () from /usr/lib/pymodules/python2.6/PyQt4/QtCore.so
#13 0x00007fc280d1568a in ?? () from /usr/lib/pymodules/python2.6/PyQt4/QtCore.so
#14 0x00007fc29e504e15 in ?? () from /usr/lib/libQtCore.so.4
#15 0x00007fc2a33548ba in start_thread () from /lib/libpthread.so.0
#16 0x00007fc2a222602d in clone () from /lib/libc.so.6
#17 0x0000000000000000 in ?? ()

Thread 2 (Thread 0x7fc271ec1700 (LWP 23743)):
#0  0x00007fc2a21f73ad in waitpid () from /lib/libc.so.6
#1  0x00007fc2a2195299 in ?? () from /lib/libc.so.6
#2  0x00007fc2a21955d0 in system () from /lib/libc.so.6
#3  0x00007fc2a3654f6a in crashHandler (sig=6) at core/main/pyboot.cpp:45
#4  <signal handler called>
#5  0x00007fc2a2189165 in raise () from /lib/libc.so.6
#6  0x00007fc2a218bf70 in abort () from /lib/libc.so.6
#7  0x00007fc2a21822b1 in __assert_fail () from /lib/libc.so.6
#8  0x00007fc288ec3091 in boost::shared_ptr<capillarylaw>::operator-> (this=0x7fc27c40eac0) at /usr/include/boost/smart_ptr/shared_ptr.hpp:418
#9  0x00007fc288e7f6d9 in Law2_ScGeom_CapillaryPhys_Capillarity::action (this=0x7fc27c40ea80) at /home/me/YADE/yade-source-and-examples/pkg/dem/Law2_ScGeom_CapillaryPhys_Capillarity.cpp:165
#10 0x00007fc29900eec3 in Scene::moveToNextTimeStep (this=0xd63ce0) at /home/me/YADE/yade-source-and-examples/core/Scene.cpp:97
#11 0x00007fc299015e8b in SimulationFlow::singleAction (this=0xce0c40) at /home/me/YADE/yade-source-and-examples/core/SimulationFlow.cpp:20
#12 0x00007fc299017424 in ThreadWorker::callSingleAction (this=0xce0c40) at /home/me/YADE/yade-source-and-examples/core/ThreadWorker.cpp:71
#13 0x00007fc299016989 in ThreadRunner::call (this=0xd66f20) at /home/me/YADE/yade-source-and-examples/core/ThreadRunner.cpp:53
#14 0x00007fc2990166cb in ThreadRunner::run (this=0xd66f20) at /home/me/YADE/yade-source-and-examples/core/ThreadRunner.cpp:27
#15 0x00007fc2990e3e03 in boost::_mfi::mf0<void, ThreadRunner>::operator() (this=0x7fc27c4f1748, p=0xd66f20) at /usr/include/boost/bind/mem_fn_template.hpp:49
#16 0x00007fc2990d4534 in boost::_bi::list1<boost::_bi::value<ThreadRunner*> >::operator()<boost::_mfi::mf0<void, ThreadRunner>, boost::_bi::list0> (this=0x7fc27c4f1758, f=..., a=.14:22:02usr/include/boost/bind/bind.hpp:253
#17 0x00007fc2990c3e89 in boost::_bi::bind_t<void, boost::_mfi::mf0<void, ThreadRunner>, boost::_bi::list1<boost::_bi::value<ThreadRunner*> > >::operator() (this=0x7fc27c4f1748) at /usr/include/boost/bind/bind_template.hpp:20
#18 0x00007fc2990b0b6e in boost::detail::function::void_function_obj_invoker0<boost::_bi::bind_t<void, boost::_mfi::mf0<void, ThreadRunner>, boost::_bi::list1<boost::_bi::value<ThreadRunner*> > >, void>::invoke (function_obj_ptr=...) at /usr/include/boost/function/function_template.hpp:153
#19 0x00007fc2991870af in boost::function0<void>::operator() (this=0x7fc27c4f1740) at /usr/include/boost/function/function_template.hpp:1013
#20 0x00007fc2991614c6 in boost::detail::thread_data<boost::function0<void> >::run (this=0x7fc27c4f1610) at /usr/include/boost/thread/detail/thread.hpp:56
#21 0x00007fc2a0dc5200 in thread_proxy () from /usr/lib/libboost_thread.so.1.42.0
#22 0x00007fc2a33548ba in start_thread () from /lib/libpthread.so.0
#23 0x00007fc2a222602d in clone () from /lib/libc.so.6
#24 0x0000000000000000 in ?? ()

Thread 1 (Thread 0x7fc2a3764700 (LWP 23738)):
#0  0x00007fc2a335c7dd in nanosleep () from /lib/libpthread.so.0
#1  0x00007fc285dea25e in pyOmega::wait (this=0xc626b0) at py/wrapper/yadeWrapper.cpp:366
#2  0x00007fc285de9db8 in pyOmega::run (this=0xc626b0, numIter=10000, doWait=true) at py/wrapper/yadeWrapper.cpp:360
#3  0x00007fc285ef7882 in boost::python::detail::invoke<int, void (pyOmega::*)(long, bool), boost::python::arg_from_python<pyOmega&>, boost::python::arg_from_python<long>, boost::python::arg_from_python<bool> > (f=@0xdbc938, tc=..., ac0=..., ac1=...) at /usr/include/boost/python/detail/invoke.hpp:94
#4  0x00007fc285ed93de in boost::python::detail::caller_arity<3u>::impl<void (pyOmega::*)(long, bool), boost::python::default_call_policies, boost::mpl::vector4<void, pyOmega&, long, bool> >::operator() (this=0xdbc938, args_=0x1d0f9b0) at /usr/include/boost/python/detail/caller.hpp:223
#5  0x00007fc285eb7f25 in boost::python::objects::caller_py_function_impl<boost::python::detail::caller<void (pyOmega::*)(long, bool), boost::python::default_call_policies, boost::mpl::vector4<void, pyOmega&, long, bool> > >::operator() (this=0xdbc930, args=0x1d0f9b0, kw=0x0) at /usr/include/boost/python/object/py_function.hpp:38
#6  0x00007fc29fd7dbde in boost::python::objects::function::call(_object*, _object*) const () from /usr/lib/libboost_python-py26.so.1.42.0
#7  0x00007fc29fd7de88 in ?? () from /usr/lib/libboost_python-py26.so.1.42.0
#8  0x00007fc29fd854fb in boost::python::handle_exception_impl(boost::function0<void>) () from /usr/lib/libboost_python-py26.so.1.42.0
#9  0x00007fc29fd7a788 in ?? () from /usr/lib/libboost_python-py26.so.1.42.0
#10 0x000000000041ef47 in PyObject_Call ()
#11 0x00000000004a72b8 in PyEval_EvalFrameEx ()
#12 0x00000000004a95c1 in PyEval_EvalCodeEx ()
#13 0x00000000004a9692 in PyEval_EvalCode ()
#14 0x00000000004c98be in PyRun_FileExFlags ()
#15 0x00000000004a0b87 in ?? ()
#16 0x00000000004a7ba5 in PyEval_EvalFrameEx ()
#17 0x00000000004a95c1 in PyEval_EvalCodeEx ()
#18 0x00000000004a7752 in PyEval_EvalFrameEx ()
#19 0x00000000004a95c1 in PyEval_EvalCodeEx ()
#20 0x00000000004a7752 in PyEval_EvalFrameEx ()
#21 0x00000000004a95c1 in PyEval_EvalCodeEx ()
#22 0x00000000004a9692 in PyEval_EvalCode ()
#23 0x00000000004c98be in PyRun_FileExFlags ()
#24 0x00000000004c9ad4 in PyRun_SimpleFileExFlags ()
#25 0x000000000041a6bd in Py_Main ()
#26 0x00007fc2a2175c4d in __libc_start_main () from /lib/libc.so.6
#27 0x00000000004198d9 in _start ()
Abgebrochen

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