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[Klaus Thoeni <question244322@xxxxxxxxxxxxxxxxxxxxx>]

Question #244322 on Yade changed:
https://answers.launchpad.net/yade/+question/244322

    Status: Answered => Open

Klaus Thoeni is still having a problem:
Hi Anton,

there was a bug in the compiler and our IT guy updated the compiler.
However, it is still not looking good [1].

We want to compile yade with pgcc because it has Opteron optimisation
and our grid is full of AMD Opterons. We would expect that if compiled
with pgcc it would run as fast as on the Intel machine.

However, it seems to be a pain in the ass.

Thanks,
Klaus

[1]
[kt748@rcglogin build]$ make -j4
Scanning dependencies of target miniEigen
Scanning dependencies of target WeightedAverage2d
Scanning dependencies of target _gts
Scanning dependencies of target yade
[  0%] [  1%] Building CXX object 
py/CMakeFiles/WeightedAverage2d.dir/WeightedAverage2d.cpp.o
Building CXX object CMakeFiles/miniEigen.dir/py/mathWrap/miniEigen.cpp.o                                
[  1%] Building C object py/CMakeFiles/_gts.dir/3rd-party/pygts-0.3.1/edge.c.o                          
"/usr/include/python2.7/pyconfig-64.h", line 1160: error: "_GNU_SOURCE" is
          predefined; attempted redefinition ignored
  #define _GNU_SOURCE 1
          ^

[  2%] Building C object py/CMakeFiles/_gts.dir/3rd-party/pygts-0.3.1/face.c.o
"/usr/include/python2.7/pyconfig-64.h", line 1160: error: "_GNU_SOURCE" is
          predefined; attempted redefinition ignored
  #define _GNU_SOURCE 1
          ^

[  3%] Building CXX object CMakeFiles/yade.dir/core/ThreadRunner.cpp.o
[  3%] Building C object py/CMakeFiles/_gts.dir/3rd-
party/pygts-0.3.1/object.c.o                        
[  4%] Building C object py/CMakeFiles/_gts.dir/3rd-
party/pygts-0.3.1/cleanup.c.o                       
[  5%] Building C object py/CMakeFiles/_gts.dir/3rd-
party/pygts-0.3.1/vertex.c.o                        
[  5%] Building C object py/CMakeFiles/_gts.dir/3rd-
party/pygts-0.3.1/triangle.c.o                      
[  6%] Building C object py/CMakeFiles/_gts.dir/3rd-
party/pygts-0.3.1/point.c.o                         
1 error detected in the compilation of "/home/kt748/YADE-
git/master_AMD/trunk/py/WeightedAverage2d.cpp".
make[2]: *** [py/CMakeFiles/WeightedAverage2d.dir/WeightedAverage2d.cpp.o] 
Error 2
make[1]: *** [py/CMakeFiles/WeightedAverage2d.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs....
[  6%] Building C object py/CMakeFiles/_gts.dir/3rd-
party/pygts-0.3.1/pygts.c.o
[  7%] Building CXX object CMakeFiles/yade.dir/core/State.cpp.o                                         
[  7%] Building CXX object CMakeFiles/yade.dir/core/Interaction.cpp.o                                   
[  8%] Building C object py/CMakeFiles/_gts.dir/3rd-
party/pygts-0.3.1/surface.c.o                       
"/usr/include/python2.7/pyconfig-64.h", line 1160: error: "_GNU_SOURCE" is
          predefined; attempted redefinition ignored
  #define _GNU_SOURCE 1
          ^

"/usr/include/python2.7/pyconfig-64.h", line 1160: error: "_GNU_SOURCE" is
          predefined; attempted redefinition ignored
  #define _GNU_SOURCE 1
          ^

[  9%] Building C object py/CMakeFiles/_gts.dir/3rd-
party/pygts-0.3.1/segment.c.o
Linking C shared library lib64/_gts.so
IPA inhibited: no main routine
[  9%] Built target _gts
[ 10%] Building CXX object CMakeFiles/yade.dir/core/Material.cpp.o
"/usr/include/python2.7/pyconfig-64.h", line 1160: error: "_GNU_SOURCE" is
          predefined; attempted redefinition ignored
  #define _GNU_SOURCE 1
          ^

"/home/kt748/YADE-git/master_AMD/build/yade/core/Interaction.hpp", line 14: 
error: 
          invalid redeclaration of type name "Interaction" (declared at line
          14 of "/home/kt748/YADE-git/master_AMD/trunk/core/Interaction.hpp")
  class Interaction: public Serializable{
        ^

"/home/kt748/YADE-git/master_AMD/build/yade/core/Interaction.hpp", line 68: 
error: 
          function "CreateSharedInteraction" has already been defined
  REGISTER_SERIALIZABLE(Interaction);
  ^

"/home/kt748/YADE-git/master_AMD/build/yade/core/Interaction.hpp", line 68: 
error: 
          function "CreateInteraction" has already been defined
  REGISTER_SERIALIZABLE(Interaction);
  ^

"/home/kt748/YADE-git/master_AMD/build/yade/core/Interaction.hpp", line 68: 
error: 
          function "CreatePureCustomInteraction" has already been defined
  REGISTER_SERIALIZABLE(Interaction);
  ^

"/home/kt748/YADE-git/master_AMD/build/yade/core/Interaction.hpp", line 68: 
error: 
          variable "registeredInteraction" has already been defined
  REGISTER_SERIALIZABLE(Interaction);
  ^

1 error detected in the compilation of "/home/kt748/YADE-
git/master_AMD/trunk/core/State.cpp".
make[2]: *** [CMakeFiles/yade.dir/core/State.cpp.o] Error 2
make[2]: *** Waiting for unfinished jobs....
1 error detected in the compilation of "/home/kt748/YADE-
git/master_AMD/trunk/py/mathWrap/miniEigen.cpp".
make[2]: *** [CMakeFiles/miniEigen.dir/py/mathWrap/miniEigen.cpp.o] Error 2
make[1]: *** [CMakeFiles/miniEigen.dir/all] Error 2
1 error detected in the compilation of "/home/kt748/YADE-
git/master_AMD/trunk/core/Material.cpp".
make[2]: *** [CMakeFiles/yade.dir/core/Material.cpp.o] Error 2
6 errors detected in the compilation of "/home/kt748/YADE-
git/master_AMD/trunk/core/Interaction.cpp".
make[2]: *** [CMakeFiles/yade.dir/core/Interaction.cpp.o] Error 2
make[1]: *** [CMakeFiles/yade.dir/all] Error 2
make: *** [all] Error 2

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