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Re: [Question #248457]: Problem with installing yade from source

 

Question #248457 on Yade changed:
https://answers.launchpad.net/yade/+question/248457

Jiadun Liu gave more information on the question:
Hi Anton,

After reading the thread
https://answers.launchpad.net/yade/+question/228440, I tried git-version
by using git clone https://github.com/yade/trunk.git.

I got the following.

-- ===========================================================
-- Yade configured with following features: Eigen3 Odeint VTK OpenMP GTS GUI CGAL PFVflow LinSolv GL2PS
-- Disabled features: SPH LIQMIGRATION LBMFLOW
-- Optimized build
-- ===========================================================
-- Configuring done
-- Generating done
-- Build files have been written to: /home/jiadun/myYade/build-dir
jiadun@jiadun-Lenovo-IdeaPad-Z500:~/myYade/build-dir$ make
Linking CXX shared library lib/x86_64-linux-gnu/_GLViewer.so
[  5%] Built target _GLViewer
[  5%] Building CXX object CMakeFiles/yade.dir/pkg/dem/DomainLimiter.cpp.o
[  6%] Building CXX object CMakeFiles/yade.dir/pkg/dem/NormalInelasticityPhys.cpp.o
[  6%] Building CXX object CMakeFiles/yade.dir/pkg/dem/InelastCohFrictMat.cpp.o
[  7%] Building CXX object CMakeFiles/yade.dir/pkg/dem/BubbleMat.cpp.o
[  7%] Building CXX object CMakeFiles/yade.dir/pkg/dem/ForceTorqueRecorder.cpp.o
[  8%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Ip2_2xInelastCohFrictMat_InelastCohFrictPhys.cpp.o
[  8%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Tetra.cpp.o
[  9%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Polyhedra_splitter.cpp.o
[ 10%] Building CXX object CMakeFiles/yade.dir/pkg/dem/RungeKuttaCashKarp54Integrator.cpp.o
[ 10%] Building CXX object CMakeFiles/yade.dir/pkg/dem/CapillaryTriaxialTest.cpp.o
[ 11%] Building CXX object CMakeFiles/yade.dir/pkg/dem/InelastCohFrictPhys.cpp.o
[ 11%] Building CXX object CMakeFiles/yade.dir/pkg/dem/FrictPhys.cpp.o
[ 12%] Building CXX object CMakeFiles/yade.dir/pkg/dem/PeriIsoCompressor.cpp.o
[ 12%] Building CXX object CMakeFiles/yade.dir/pkg/dem/KinemCNDEngine.cpp.o
[ 13%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Shop_02.cpp.o
[ 13%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Ip2_FrictMat_FrictMat_FrictPhys.cpp.o
[ 14%] Building CXX object CMakeFiles/yade.dir/pkg/dem/CohFrictMat.cpp.o
[ 14%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Disp2DPropLoadEngine.cpp.o
[ 15%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Ip2_FrictMat_FrictMat_CapillaryPhys.cpp.o
[ 16%] Building CXX object CMakeFiles/yade.dir/pkg/dem/VTKRecorder.cpp.o
In file included from /usr/include/c++/4.8/backward/strstream:51:0,
                 from /usr/include/vtk-5.8/vtkIOStream.h:112,
                 from /usr/include/vtk-5.8/vtkSystemIncludes.h:40,
                 from /usr/include/vtk-5.8/vtkIndent.h:24,
                 from /usr/include/vtk-5.8/vtkObjectBase.h:43,
                 from /usr/include/vtk-5.8/vtkObject.h:41,
                 from /usr/include/vtk-5.8/vtkCell.h:40,
                 from /usr/include/vtk-5.8/vtkQuad.h:25,
                 from /home/jiadun/myYade/trunk/pkg/dem/VTKRecorder.hpp:3,
                 from /home/jiadun/myYade/trunk/pkg/dem/VTKRecorder.cpp:3:
/usr/include/c++/4.8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp]
 #warning \
  ^
[ 16%] Building CXX object CMakeFiles/yade.dir/pkg/dem/LudingPM.cpp.o
[ 17%] Building CXX object CMakeFiles/yade.dir/pkg/dem/KinemCTDEngine.cpp.o
[ 17%] Building CXX object CMakeFiles/yade.dir/pkg/dem/UnbalancedForceCallbacks.cpp.o

[ 30%] Building CXX object CMakeFiles/yade.dir/pkg/dem/TesselationWrapper.cpp.o
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1761:0,
                 from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17,
                 from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from /home/jiadun/myYade/build-dir/yade/lib/pyutil/numpy_boost.hpp:40,
                 from /home/jiadun/myYade/build-dir/yade/lib/pyutil/numpy.hpp:3,
                 from /home/jiadun/myYade/trunk/pkg/dem/TesselationWrapper.cpp:11:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 #warning "Using deprecated NumPy API, disable it by " \
  ^
[ 31%] Building CXX object CMakeFiles/yade.dir/pkg/dem/SampleCapillaryPressureEngine.cpp.o
[ 31%] Building CXX object CMakeFiles/yade.dir/pkg/dem/ScGeom.cpp.o

[ 38%] Building CXX object CMakeFiles/yade.dir/pkg/dem/TriaxialCompressionEngine.cpp.o
[ 38%] Building CXX object CMakeFiles/yade.dir/pkg/dem/STLImporter.cpp.o
In file included from /home/jiadun/myYade/trunk/pkg/dem/STLImporter.cpp:10:0:
/home/jiadun/myYade/build-dir/yade/lib/import/STLReader.hpp: In member function ‘bool STLReader::open_ascii(const char*, OutV, OutE, OutF, OutN) [with OutV = std::back_insert_iterator<std::vector<double> >; OutE = std::back_insert_iterator<std::vector<int> >; OutF = std::back_insert_iterator<std::vector<int> >; OutN = std::back_insert_iterator<std::vector<double> >]’:
/home/jiadun/myYade/build-dir/yade/lib/import/STLReader.hpp:120:2: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result]
  fscanf(fp, "%*s %*s %f %f %f\n", &n[0], &n[1], &n[2]);
  ^
/home/jiadun/myYade/build-dir/yade/lib/import/STLReader.hpp:121:2: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result]
  fscanf(fp, "%*s %*s");
  ^
/home/jiadun/myYade/build-dir/yade/lib/import/STLReader.hpp:122:2: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result]
  fscanf(fp, "%*s %f %f %f\n", &v[0][0],  &v[0][1],  &v[0][2]);
  ^
/home/jiadun/myYade/build-dir/yade/lib/import/STLReader.hpp:123:2: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result]
  fscanf(fp, "%*s %f %f %f\n", &v[1][0],  &v[1][1],  &v[1][2]);
  ^
/home/jiadun/myYade/build-dir/yade/lib/import/STLReader.hpp:124:2: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result]
  fscanf(fp, "%*s %f %f %f\n", &v[2][0],  &v[2][1],  &v[2][2]);
  ^
/home/jiadun/myYade/build-dir/yade/lib/import/STLReader.hpp:125:2: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result]
  fscanf(fp, "%*s"); // end loop
  ^
/home/jiadun/myYade/build-dir/yade/lib/import/STLReader.hpp:126:2: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result]
  fscanf(fp, "%*s"); // end facet
  ^
[ 39%] Building CXX object CMakeFiles/yade.dir/pkg/lbm/LBMlink.cpp.o
[ 39%] Building CXX object CMakeFiles/yade.dir/pkg/lbm/LBMnode.cpp.o

[ 72%] Building CXX object CMakeFiles/yade.dir/lib/triangulation/TriaxialState.cpp.o
Linking CXX shared library lib/x86_64-linux-gnu/libyade.so
[ 96%] Built target yade
Scanning dependencies of target boot
[ 97%] Building CXX object CMakeFiles/boot.dir/core/main/pyboot.cpp.o
Linking CXX shared library lib/x86_64-linux-gnu/boot.so
[ 97%] Built target boot
Scanning dependencies of target WeightedAverage2d
[ 97%] Building CXX object py/CMakeFiles/WeightedAverage2d.dir/WeightedAverage2d.cpp.o
Linking CXX shared library lib/x86_64-linux-gnu/WeightedAverage2d.so
[ 97%] Built target WeightedAverage2d
Scanning dependencies of target _customConverters
[ 97%] Building CXX object py/CMakeFiles/_customConverters.dir/wrapper/customConverters.cpp.o
Linking CXX shared library lib/x86_64-linux-gnu/_customConverters.so
[ 97%] Built target _customConverters
Scanning dependencies of target _packObb
[ 98%] Building CXX object py/CMakeFiles/_packObb.dir/pack/_packObb.cpp.o
Linking CXX shared library lib/x86_64-linux-gnu/_packObb.so
[ 98%] Built target _packObb
Scanning dependencies of target _packPredicates
[ 99%] Building CXX object py/CMakeFiles/_packPredicates.dir/pack/_packPredicates.cpp.o
Linking CXX shared library lib/x86_64-linux-gnu/_packPredicates.so
[ 99%] Built target _packPredicates
Scanning dependencies of target _packSpheres
[ 99%] Building CXX object py/CMakeFiles/_packSpheres.dir/pack/_packSpheres.cpp.o
Linking CXX shared library lib/x86_64-linux-gnu/_packSpheres.so
[ 99%] Built target _packSpheres
Scanning dependencies of target _polyhedra_utils
[100%] Building CXX object py/CMakeFiles/_polyhedra_utils.dir/_polyhedra_utils.cpp.o
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1761:0,
                 from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17,
                 from /home/jiadun/myYade/trunk/py/_polyhedra_utils.cpp:17:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 #warning "Using deprecated NumPy API, disable it by " \
  ^
Linking CXX shared library lib/x86_64-linux-gnu/_polyhedra_utils.so
[100%] Built target _polyhedra_utils
Scanning dependencies of target _utils
[100%] Building CXX object py/CMakeFiles/_utils.dir/_utils.cpp.o
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1761:0,
                 from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17,
                 from /home/jiadun/myYade/trunk/py/_utils.cpp:18:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 #warning "Using deprecated NumPy API, disable it by " \
  ^
Linking CXX shared library lib/x86_64-linux-gnu/_utils.so
[100%] Built target _utils
Scanning dependencies of target wrapper
[100%] Building CXX object py/CMakeFiles/wrapper.dir/wrapper/yadeWrapper.cpp.o
Linking CXX shared library lib/x86_64-linux-gnu/wrapper.so



copying extra files... done
writing mimetype file...
writing META-INF/container.xml file...
writing content.opf file...
WARNING: unknown mimetype for _static/yade-favicon.ico, ignoring
WARNING: unknown mimetype for _static/README, ignoring
WARNING: unknown mimetype for _images/graphviz-7763e38875a4cfed91b732553e0bcb8b34557b09.png.map, ignoring
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writing toc.ncx file...
writing Yade.epub file...
build succeeded, 29 warnings.
/bin/sh: 1: xelatex: not found
make[3]: *** [doc] Error 127
make[2]: *** [CMakeFiles/doc.dir/all] Error 2
make[1]: *** [CMakeFiles/doc.dir/rule] Error 2
make: *** [doc] Error 2

Best regards,
Jiadun

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