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Re: [Question #239596]: FlowEngine is not defined in yade-daily - On Ubuntu 13.10

To: yade-users@xxxxxxxxxxxxxxxxxxx
From: Son Pham Thai <question239596@xxxxxxxxxxxxxxxxxxxxx>
Date: Fri, 02 Sep 2016 15:57:28 -0000
Reply-to: question239596@xxxxxxxxxxxxxxxxxxxxx
Sender: bounces@xxxxxxxxxxxxx
Question #239596 on Yade changed:
https://answers.launchpad.net/yade/+question/239596

Son Pham Thai posted a new comment:
Hi all,

I got a similar error:  "NameError: name 'TwoPhaseFlowEngine' is not
defined"

After a normal update in Ubuntu, my operation system was crash. I have
reinstalled Ubuntu (version 14.04.5 LTS (Trusty Tahr) ). When I compiled
binary Yade, I got the above error.

The following is my installation procedure (for yade-2016.06a)

sudo add-apt-repository ppa:yade-users/external
sudo apt-get update

sudo apt-get install cmake git freeglut3-dev libloki-dev \
libboost-all-dev fakeroot dpkg-dev build-essential g++ \
python-dev ipython python-matplotlib libsqlite3-dev python-numpy python-tk gnuplot \
libgts-dev python-pygraphviz libvtk6-dev python-numpy libeigen3-dev \
python-xlib python-pyqt5 pyqt5-dev-tools python-pyqt5.qtwebkit gtk2-engines-pixbuf python-argparse \
libqglviewer-dev python-imaging libjs-jquery python-sphinx python-git python-bibtex \
libxmu-dev libxi-dev libcgal-dev help2man libbz2-dev zlib1g-dev python-minieigen

(after this command, i got:
Note, selecting 'libpython2.7-stdlib' instead of 'python-argparse'
E: Unable to locate package python-pyqt5
E: Unable to locate package python-pyqt5.qtwebkit
E: Couldn't find any package by regex 'python-pyqt5.qtwebkit'

sudo apt-get install python-gts
sudo apt-get install libopenblas-dev libsuitesparse-metis-dev

sudo add-apt-repository ppa:yade-users/external
sudo apt-get update


My Compilation:

My folder structure:
myYade/                
        trunk/          ## downloaded from https://launchpad.net/yade/+download (I have also tried   yade-1.20.0 and  yade-1.14.0)
        build/          ## downloaded from https://github.com/yade/trunk
        install/        ## initially is a blank folder

   cd /home/son/Desktop/myYade/build


In the  build-directory, I have entered these following command in terminal window:
   son@son-desktop:~/Desktop/myYade/build$
cmake -DCMAKE_INSTALL_PREFIX=/home/son/Desktop/myYade/install /home/son/Desktop/myYade/trunk -DUSE_QT5=OFF

-DUSE_QT5=OFF is because:
https://answers.launchpad.net/yade/+question/295554

After this, I got:

Yade will be installed to /home/son/Desktop/myYade/install
-- Suffix is set to -2016.06a
-- LIBRARY_OUTPUT_PATH is set to lib/x86_64-linux-gnu
-- runtimePREFIX is set to /home/son/Desktop/myYade/install
-- Found gts: /usr/lib/python2.7/dist-packages/gts 
-- Use system gts version
-- Found minieigen: /usr/lib/python2.7/dist-packages/minieigen.so 
-- Found Tkinter: /usr/lib/python2.7/lib-tk/Tkinter.py 
-- ===========================================================
-- Yade configured with following features: Odeint VTK OpenMP GTS GUI CGAL PFVFLOW LINSOLV GL2PS LBMFLOW
-- Disabled features: SPH LIQMIGRATION MASK_ARBITRARY PROFILING PotentialParticles
-- Optimized build
-- ===========================================================
-- Configuring done
-- Generating done
-- Build files have been written to: /home/son/Desktop/myYade/build


son@son-desktop:~/Desktop/myYade/build$ make -j4
[  0%] Generating qt4/moc_OpenGLManager.cxx
[  1%] Scanning dependencies of target WeightedAverage2d
Scanning dependencies of target _packObb
Generating qt4/moc_GLViewer.cxx
[  2%] [  2%] Building CXX object py/CMakeFiles/WeightedAverage2d.dir/WeightedAverage2d.cpp.o
Building CXX object py/CMakeFiles/_packObb.dir/pack/_packObb.cpp.o
Scanning dependencies of target _polyhedra_utils
Scanning dependencies of target _GLViewer
[  3%] Building CXX object py/CMakeFiles/_polyhedra_utils.dir/_polyhedra_utils.cpp.o
[  4%] Building CXX object gui/CMakeFiles/_GLViewer.dir/qt4/GLViewer.cpp.o
Linking CXX shared library lib/x86_64-linux-gnu/_packObb.so
[  4%] Built target _packObb
[  5%] Building CXX object gui/CMakeFiles/_GLViewer.dir/qt4/_GLViewer.cpp.o
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1761:0,
                 from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17,
                 from /home/son/Desktop/myYade/trunk/py/_polyhedra_utils.cpp:15:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 #warning "Using deprecated NumPy API, disable it by " \
  ^
Linking CXX shared library lib/x86_64-linux-gnu/WeightedAverage2d.so
[  5%] Built target WeightedAverage2d
[  5%] Building CXX object gui/CMakeFiles/_GLViewer.dir/qt4/OpenGLManager.cpp.o
[  6%] Building CXX object gui/CMakeFiles/_GLViewer.dir/qt4/GLViewerDisplay.cpp.o
[  6%] Building CXX object gui/CMakeFiles/_GLViewer.dir/qt4/GLViewerMouse.cpp.o
[  7%] Building CXX object gui/CMakeFiles/_GLViewer.dir/qt4/moc_GLViewer.cxx.o
Linking CXX shared library lib/x86_64-linux-gnu/_polyhedra_utils.so
[  7%] Built target _polyhedra_utils
[  8%] Building CXX object gui/CMakeFiles/_GLViewer.dir/qt4/moc_OpenGLManager.cxx.o
Linking CXX shared library lib/x86_64-linux-gnu/_GLViewer.so
[  8%] Built target _GLViewer
Scanning dependencies of target yade
[ 10%] [ 10%] [ 10%] [ 11%] Building CXX object CMakeFiles/yade.dir/core/SimulationFlow.cpp.o
Building CXX object CMakeFiles/yade.dir/core/ForceContainerSerial.cpp.o
Building CXX object CMakeFiles/yade.dir/core/ThreadWorker.cpp.o
Building CXX object CMakeFiles/yade.dir/core/Omega.cpp.o
[ 11%] Building CXX object CMakeFiles/yade.dir/core/BodyContainer.cpp.o
[ 12%] Building CXX object CMakeFiles/yade.dir/core/InteractionContainer.cpp.o
[ 13%] Building CXX object CMakeFiles/yade.dir/core/ForceContainerParallel.cpp.o
[ 13%] Building CXX object CMakeFiles/yade.dir/core/Scene.cpp.o
[ 14%] Building CXX object CMakeFiles/yade.dir/core/Clump.cpp.o
[ 14%] Building CXX object CMakeFiles/yade.dir/core/ThreadRunner.cpp.o
[ 15%] Building CXX object CMakeFiles/yade.dir/core/FileGenerator.cpp.o
[ 16%] Building CXX object CMakeFiles/yade.dir/core/corePlugins.cpp.o
[ 16%] Building CXX object CMakeFiles/yade.dir/core/Interaction.cpp.o
[ 17%] Building CXX object CMakeFiles/yade.dir/core/Cell.cpp.o
[ 17%] Building CXX object CMakeFiles/yade.dir/core/State.cpp.o
[ 18%] Building CXX object CMakeFiles/yade.dir/core/Material.cpp.o
[ 19%] Building CXX object CMakeFiles/yade.dir/core/Body.cpp.o
[ 19%] Building CXX object CMakeFiles/yade.dir/pkg/pfv/DummyFlowEngine.cpp.o
[ 20%] Building CXX object CMakeFiles/yade.dir/pkg/pfv/PeriodicFlowEngine.cpp.o
[ 20%] Building CXX object CMakeFiles/yade.dir/pkg/pfv/DFNFlow.cpp.o
[ 21%] Building CXX object CMakeFiles/yade.dir/pkg/pfv/UnsaturatedEngine.cpp.o
[ 22%] Building CXX object CMakeFiles/yade.dir/pkg/pfv/TwoPhaseFlowEngine.cpp.o
[ 22%] Building CXX object CMakeFiles/yade.dir/pkg/pfv/FlowEngine.cpp.o
[ 23%] Building CXX object CMakeFiles/yade.dir/pkg/pfv/SoluteFlowEngine.cpp.o
[ 23%] Building CXX object CMakeFiles/yade.dir/pkg/common/common.cpp.o
[ 24%] Building CXX object CMakeFiles/yade.dir/pkg/common/Grid_GUI.cpp.o
[ 25%] Building CXX object CMakeFiles/yade.dir/pkg/common/ZECollider.cpp.o
[ 25%] Building CXX object CMakeFiles/yade.dir/pkg/common/Collider.cpp.o
[ 26%] Building CXX object CMakeFiles/yade.dir/pkg/common/InteractionLoop.cpp.o
[ 26%] Building CXX object CMakeFiles/yade.dir/pkg/common/PFacet.cpp.o
[ 27%] Building CXX object CMakeFiles/yade.dir/pkg/common/Dispatching.cpp.o
[ 28%] Building CXX object CMakeFiles/yade.dir/pkg/common/SPHEngine.cpp.o
[ 28%] Building CXX object CMakeFiles/yade.dir/pkg/common/Gl1_Primitives.cpp.o
[ 29%] Building CXX object CMakeFiles/yade.dir/pkg/common/Grid.cpp.o
[ 29%] Building CXX object CMakeFiles/yade.dir/pkg/common/Gl1_NormPhys.cpp.o
[ 30%] Building CXX object CMakeFiles/yade.dir/pkg/common/Facet.cpp.o
[ 31%] Building CXX object CMakeFiles/yade.dir/pkg/common/InsertionSortCollider.cpp.o
[ 31%] Building CXX object CMakeFiles/yade.dir/pkg/common/ForceEngine.cpp.o
[ 32%] Building CXX object CMakeFiles/yade.dir/pkg/common/Gl1_PFacet.cpp.o
[ 32%] Building CXX object CMakeFiles/yade.dir/pkg/common/GravityEngines.cpp.o
[ 33%] Building CXX object CMakeFiles/yade.dir/pkg/common/Bo1_Aabb.cpp.o
[ 34%] Building CXX object CMakeFiles/yade.dir/pkg/common/Cylinder.cpp.o
[ 34%] Building CXX object CMakeFiles/yade.dir/pkg/common/OpenGLRenderer.cpp.o
[ 35%] Building CXX object CMakeFiles/yade.dir/pkg/common/SpatialQuickSortCollider.cpp.o
[ 35%] Building CXX object CMakeFiles/yade.dir/pkg/common/ParallelEngine.cpp.o
[ 36%] Building CXX object CMakeFiles/yade.dir/pkg/common/ResetRandomPosition.cpp.o
[ 37%] Building CXX object CMakeFiles/yade.dir/pkg/common/Wall.cpp.o
[ 37%] Building CXX object CMakeFiles/yade.dir/pkg/common/Gl1_PotentialParticle.cpp.o
[ 38%] Building CXX object CMakeFiles/yade.dir/pkg/common/KinematicEngines.cpp.o
[ 38%] Building CXX object CMakeFiles/yade.dir/pkg/common/MatchMaker.cpp.o
[ 39%] Building CXX object CMakeFiles/yade.dir/pkg/common/PersistentTriangulationCollider.cpp.o
[ 40%] Building CXX object CMakeFiles/yade.dir/pkg/lbm/LBMnode.cpp.o
[ 40%] Building CXX object CMakeFiles/yade.dir/pkg/lbm/HydrodynamicsLawLBM.cpp.o
[ 41%] Building CXX object CMakeFiles/yade.dir/pkg/dem/CapillaryPhys1.cpp.o
[ 41%] Building CXX object CMakeFiles/yade.dir/pkg/dem/deformablecohesive/LinElastMat.cpp.o
[ 42%] Building CXX object CMakeFiles/yade.dir/pkg/dem/deformablecohesive/FEInternalForceDispatchers.cpp.o
[ 43%] Building CXX object CMakeFiles/yade.dir/pkg/dem/deformablecohesive/If2_2xLin4NodeTetra_LinCohesiveStiffPropDampElastMat.cpp.o
[ 43%] Building CXX object CMakeFiles/yade.dir/pkg/dem/deformablecohesive/FEInternalForceEngine.cpp.o
[ 44%] Building CXX object CMakeFiles/yade.dir/pkg/dem/deformablecohesive/DeformableElement.cpp.o
[ 44%] Building CXX object CMakeFiles/yade.dir/pkg/dem/deformablecohesive/CohesiveMat.cpp.o
[ 45%] Building CXX object CMakeFiles/yade.dir/pkg/dem/deformablecohesive/Lin4NodeTetra.cpp.o
[ 46%] Building CXX object CMakeFiles/yade.dir/pkg/dem/deformablecohesive/If2_Lin4NodeTetra_LinIsoRayleighDampElast.cpp.o
[ 46%] Building CXX object CMakeFiles/yade.dir/pkg/dem/deformablecohesive/Node.cpp.o
[ 47%] Building CXX object CMakeFiles/yade.dir/pkg/dem/deformablecohesive/Gl1_Node.cpp.o
[ 48%] Building CXX object CMakeFiles/yade.dir/pkg/dem/deformablecohesive/Bo1_Node_Aabb.cpp.o
[ 48%] Building CXX object CMakeFiles/yade.dir/pkg/dem/deformablecohesive/Bo1_DeformableElement_Aabb.cpp.o
[ 49%] Building CXX object CMakeFiles/yade.dir/pkg/dem/deformablecohesive/DeformableCohesiveElement.cpp.o
[ 49%] Building CXX object CMakeFiles/yade.dir/pkg/dem/deformablecohesive/Lin4NodeTetra_Lin4NodeTetra_InteractionElement.cpp.o
In file included from /home/son/Desktop/myYade/trunk/pkg/dem/deformablecohesive/DeformableCohesiveElement.cpp:10:0:
/home/son/Desktop/myYade/trunk/pkg/dem/deformablecohesive/DeformableCohesiveElement.hpp: In member function ‘bool DeformableCohesiveElement::nodepair::operator<(const DeformableCohesiveElement::nodepair&) const’:
/home/son/Desktop/myYade/trunk/pkg/dem/deformablecohesive/DeformableCohesiveElement.hpp:49:5: warning: control reaches end of non-void function [-Wreturn-type]
     }
     ^
In file included from /home/son/Desktop/myYade/trunk/pkg/dem/deformablecohesive/Lin4NodeTetra_Lin4NodeTetra_InteractionElement.hpp:17:0,
                 from /home/son/Desktop/myYade/trunk/pkg/dem/deformablecohesive/Lin4NodeTetra_Lin4NodeTetra_InteractionElement.cpp:8:
/home/son/Desktop/myYade/trunk/pkg/dem/deformablecohesive/DeformableCohesiveElement.hpp: In member function ‘bool DeformableCohesiveElement::nodepair::operator<(const DeformableCohesiveElement::nodepair&) const’:
/home/son/Desktop/myYade/trunk/pkg/dem/deformablecohesive/DeformableCohesiveElement.hpp:49:5: warning: control reaches end of non-void function [-Wreturn-type]
     }
     ^
[ 50%] Building CXX object CMakeFiles/yade.dir/pkg/dem/deformablecohesive/Gl1_DeformableElement.cpp.o
In file included from /usr/include/eigen3/Eigen/Core:277:0,
                 from /home/son/Desktop/myYade/trunk/lib/base/Math.hpp:89,
                 from /home/son/Desktop/myYade/trunk/lib/serialization/Serializable.hpp:15,
                 from /home/son/Desktop/myYade/trunk/core/Shape.hpp:11,
                 from /home/son/Desktop/myYade/trunk/pkg/common/Dispatching.hpp:2,
                 from /home/son/Desktop/myYade/trunk/pkg/dem/deformablecohesive/Bo1_DeformableElement_Aabb.hpp:11,
                 from /home/son/Desktop/myYade/trunk/pkg/dem/deformablecohesive/Bo1_DeformableElement_Aabb.cpp:9:
/usr/include/eigen3/Eigen/src/Core/DenseCoeffsBase.h: In member function ‘virtual void Bo1_DeformableElement_Aabb::go(const boost::shared_ptr<Shape>&, boost::shared_ptr<Bound>&, const Se3r&, const Body*)’:
/usr/include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:495:7: warning: ‘*((void*)& min +16)’ may be used uninitialized in this function [-Wmaybe-uninitialized]
       derived().coeffRef(index) = other.derived().coeff(index);
       ^
/home/son/Desktop/myYade/trunk/pkg/dem/deformablecohesive/Bo1_DeformableElement_Aabb.cpp:21:11: note: ‘*((void*)& min +16)’ was declared here
  Vector3r min,max;
           ^
In file included from /usr/include/eigen3/Eigen/Core:277:0,
                 from /home/son/Desktop/myYade/trunk/lib/base/Math.hpp:89,
                 from /home/son/Desktop/myYade/trunk/lib/serialization/Serializable.hpp:15,
                 from /home/son/Desktop/myYade/trunk/core/Shape.hpp:11,
                 from /home/son/Desktop/myYade/trunk/pkg/common/Dispatching.hpp:2,
                 from /home/son/Desktop/myYade/trunk/pkg/dem/deformablecohesive/Bo1_DeformableElement_Aabb.hpp:11,
                 from /home/son/Desktop/myYade/trunk/pkg/dem/deformablecohesive/Bo1_DeformableElement_Aabb.cpp:9:
/usr/include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:495:7: warning: ‘*((void*)& min +8)’ may be used uninitialized in this function [-Wmaybe-uninitialized]
       derived().coeffRef(index) = other.derived().coeff(index);
       ^
/home/son/Desktop/myYade/trunk/pkg/dem/deformablecohesive/Bo1_DeformableElement_Aabb.cpp:21:11: note: ‘*((void*)& min +8)’ was declared here
  Vector3r min,max;
           ^
In file included from /usr/include/eigen3/Eigen/Core:277:0,
                 from /home/son/Desktop/myYade/trunk/lib/base/Math.hpp:89,
                 from /home/son/Desktop/myYade/trunk/lib/serialization/Serializable.hpp:15,
                 from /home/son/Desktop/myYade/trunk/core/Shape.hpp:11,
                 from /home/son/Desktop/myYade/trunk/pkg/common/Dispatching.hpp:2,
                 from /home/son/Desktop/myYade/trunk/pkg/dem/deformablecohesive/Bo1_DeformableElement_Aabb.hpp:11,
                 from /home/son/Desktop/myYade/trunk/pkg/dem/deformablecohesive/Bo1_DeformableElement_Aabb.cpp:9:
/usr/include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:495:7: warning: ‘max’ may be used uninitialized in this function [-Wmaybe-uninitialized]
       derived().coeffRef(index) = other.derived().coeff(index);
       ^
/home/son/Desktop/myYade/trunk/pkg/dem/deformablecohesive/Bo1_DeformableElement_Aabb.cpp:21:15: note: ‘max’ was declared here
  Vector3r min,max;
               ^
In file included from /usr/include/eigen3/Eigen/Core:277:0,
                 from /home/son/Desktop/myYade/trunk/lib/base/Math.hpp:89,
                 from /home/son/Desktop/myYade/trunk/lib/serialization/Serializable.hpp:15,
                 from /home/son/Desktop/myYade/trunk/core/Shape.hpp:11,
                 from /home/son/Desktop/myYade/trunk/pkg/common/Dispatching.hpp:2,
                 from /home/son/Desktop/myYade/trunk/pkg/dem/deformablecohesive/Bo1_DeformableElement_Aabb.hpp:11,
                 from /home/son/Desktop/myYade/trunk/pkg/dem/deformablecohesive/Bo1_DeformableElement_Aabb.cpp:9:
/usr/include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:495:7: warning: ‘*((void*)& max +8)’ may be used uninitialized in this function [-Wmaybe-uninitialized]
       derived().coeffRef(index) = other.derived().coeff(index);
       ^
/home/son/Desktop/myYade/trunk/pkg/dem/deformablecohesive/Bo1_DeformableElement_Aabb.cpp:21:15: note: ‘*((void*)& max +8)’ was declared here
  Vector3r min,max;
               ^
In file included from /usr/include/eigen3/Eigen/Core:277:0,
                 from /home/son/Desktop/myYade/trunk/lib/base/Math.hpp:89,
                 from /home/son/Desktop/myYade/trunk/lib/serialization/Serializable.hpp:15,
                 from /home/son/Desktop/myYade/trunk/core/Shape.hpp:11,
                 from /home/son/Desktop/myYade/trunk/pkg/common/Dispatching.hpp:2,
                 from /home/son/Desktop/myYade/trunk/pkg/dem/deformablecohesive/Bo1_DeformableElement_Aabb.hpp:11,
                 from /home/son/Desktop/myYade/trunk/pkg/dem/deformablecohesive/Bo1_DeformableElement_Aabb.cpp:9:
/usr/include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:495:7: warning: ‘*((void*)& max +16)’ may be used uninitialized in this function [-Wmaybe-uninitialized]
       derived().coeffRef(index) = other.derived().coeff(index);
       ^
/home/son/Desktop/myYade/trunk/pkg/dem/deformablecohesive/Bo1_DeformableElement_Aabb.cpp:21:15: note: ‘*((void*)& max +16)’ was declared here
  Vector3r min,max;
               ^
In file included from /usr/include/eigen3/Eigen/Core:277:0,
                 from /home/son/Desktop/myYade/trunk/lib/base/Math.hpp:89,
                 from /home/son/Desktop/myYade/trunk/lib/serialization/Serializable.hpp:15,
                 from /home/son/Desktop/myYade/trunk/core/Shape.hpp:11,
                 from /home/son/Desktop/myYade/trunk/pkg/common/Dispatching.hpp:2,
                 from /home/son/Desktop/myYade/trunk/pkg/dem/deformablecohesive/Bo1_DeformableElement_Aabb.hpp:11,
                 from /home/son/Desktop/myYade/trunk/pkg/dem/deformablecohesive/Bo1_DeformableElement_Aabb.cpp:9:
/usr/include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:495:7: warning: ‘min’ may be used uninitialized in this function [-Wmaybe-uninitialized]
       derived().coeffRef(index) = other.derived().coeff(index);
       ^
/home/son/Desktop/myYade/trunk/pkg/dem/deformablecohesive/Bo1_DeformableElement_Aabb.cpp:21:11: note: ‘min’ was declared here
  Vector3r min,max;
           ^
[ 51%] Building CXX object CMakeFiles/yade.dir/pkg/dem/ElasticContactLaw.cpp.o
[ 51%] Building CXX object CMakeFiles/yade.dir/pkg/dem/TesselationWrapper.cpp.o
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1761:0,
                 from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17,
                 from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from /home/son/Desktop/myYade/trunk/lib/pyutil/numpy_boost.hpp:40,
                 from /home/son/Desktop/myYade/trunk/pkg/dem/TesselationWrapper.cpp:15:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 #warning "Using deprecated NumPy API, disable it by " \
  ^
[ 52%] Building CXX object CMakeFiles/yade.dir/pkg/dem/FrictViscoPM.cpp.o
[ 52%] Building CXX object CMakeFiles/yade.dir/pkg/dem/TriaxialStressController.cpp.o
[ 53%] Building CXX object CMakeFiles/yade.dir/pkg/dem/InelastCohFrictPM.cpp.o
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:26:0,
                 from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from /home/son/Desktop/myYade/trunk/lib/pyutil/numpy_boost.hpp:40,
                 from /home/son/Desktop/myYade/trunk/pkg/dem/TesselationWrapper.cpp:15:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1629:1: warning: ‘int _import_array()’ defined but not used [-Wunused-function]
 _import_array(void)
 ^
[ 54%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Ig2_Box_Sphere_ScGeom.cpp.o
[ 54%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Ig2_PP_PP_ScGeom.cpp.o
[ 55%] Building CXX object CMakeFiles/yade.dir/pkg/dem/CohesiveFrictionalContactLaw.cpp.o
[ 55%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Ig2_Facet_Sphere_ScGeom.cpp.o
[ 56%] Building CXX object CMakeFiles/yade.dir/pkg/dem/SampleCapillaryPressureEngine.cpp.o
[ 57%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Ip2_ElastMat.cpp.o
[ 57%] Building CXX object CMakeFiles/yade.dir/pkg/dem/ViscoelasticPM.cpp.o
[ 58%] Building CXX object CMakeFiles/yade.dir/pkg/dem/PotentialParticle.cpp.o
[ 58%] Building CXX object CMakeFiles/yade.dir/pkg/dem/PeriIsoCompressor.cpp.o
[ 59%] Building CXX object CMakeFiles/yade.dir/pkg/dem/HertzMindlin.cpp.o
[ 60%] Building CXX object CMakeFiles/yade.dir/pkg/dem/FrictPhys.cpp.o
[ 60%] Building CXX object CMakeFiles/yade.dir/pkg/dem/FacetTopologyAnalyzer.cpp.o
[ 61%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Polyhedra.cpp.o
[ 61%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Ig2_Sphere_Sphere_ScGeom.cpp.o
[ 62%] Building CXX object CMakeFiles/yade.dir/pkg/dem/CapillaryTriaxialTest.cpp.o
[ 63%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Law2_ScGeom_CapillaryPhys_Capillarity1.cpp.o
[ 63%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Polyhedra_support.cpp.o
[ 64%] Building CXX object CMakeFiles/yade.dir/pkg/dem/MortarMat.cpp.o
[ 64%] Building CXX object CMakeFiles/yade.dir/pkg/dem/LudingPM.cpp.o
[ 65%] Building CXX object CMakeFiles/yade.dir/pkg/dem/NewtonIntegrator.cpp.o
[ 66%] Building CXX object CMakeFiles/yade.dir/pkg/dem/ViscoelasticCapillarPM.cpp.o
[ 66%] Building CXX object CMakeFiles/yade.dir/pkg/dem/SpheresFactory.cpp.o
[ 67%] Building CXX object CMakeFiles/yade.dir/pkg/dem/CapillaryStressRecorder.cpp.o
[ 67%] Building CXX object CMakeFiles/yade.dir/pkg/dem/VTKRecorder.cpp.o
In file included from /usr/include/c++/4.8/backward/strstream:51:0,
                 from /usr/include/vtk-5.8/vtkIOStream.h:112,
                 from /usr/include/vtk-5.8/vtkSystemIncludes.h:40,
                 from /usr/include/vtk-5.8/vtkIndent.h:24,
                 from /usr/include/vtk-5.8/vtkObjectBase.h:43,
                 from /usr/include/vtk-5.8/vtkObject.h:41,
                 from /usr/include/vtk-5.8/vtkCell.h:40,
                 from /usr/include/vtk-5.8/vtkQuad.h:25,
                 from /home/son/Desktop/myYade/trunk/pkg/dem/VTKRecorder.hpp:3,
                 from /home/son/Desktop/myYade/trunk/pkg/dem/VTKRecorder.cpp:3:
/usr/include/c++/4.8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp]
 #warning \
  ^
[ 68%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Tetra.cpp.o
[ 69%] Building CXX object CMakeFiles/yade.dir/pkg/dem/ConcretePM.cpp.o
[ 69%] Building CXX object CMakeFiles/yade.dir/pkg/dem/ThreeDTriaxialEngine.cpp.o
[ 70%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Law2_ScGeom_CapillaryPhys_Capillarity.cpp.o
[ 70%] Building CXX object CMakeFiles/yade.dir/pkg/dem/CohesiveTriaxialTest.cpp.o
[ 71%] Building CXX object CMakeFiles/yade.dir/pkg/dem/ForceTorqueRecorder.cpp.o
[ 72%] Building CXX object CMakeFiles/yade.dir/pkg/dem/WirePM.cpp.o
[ 72%] Building CXX object CMakeFiles/yade.dir/pkg/dem/BubbleMat.cpp.o
[ 73%] Building CXX object CMakeFiles/yade.dir/pkg/dem/PotentialParticle2AABB.cpp.o
[ 73%] Building CXX object CMakeFiles/yade.dir/pkg/dem/STLImporter.cpp.o
In file included from /home/son/Desktop/myYade/trunk/pkg/dem/STLImporter.cpp:8:0:
/home/son/Desktop/myYade/trunk/pkg/dem/STLImporter.hpp: In member function ‘bool STLReader::open_ascii(const char*, OutV, OutE, OutF, OutN) [with OutV = std::back_insert_iterator<std::vector<double> >; OutE = std::back_insert_iterator<std::vector<int> >; OutF = std::back_insert_iterator<std::vector<int> >; OutN = std::back_insert_iterator<std::vector<double> >]’:
/home/son/Desktop/myYade/trunk/pkg/dem/STLImporter.hpp:129:5: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result]
     fscanf(fp, "%*s %*s %f %f %f\n", &n[0], &n[1], &n[2]);
     ^
/home/son/Desktop/myYade/trunk/pkg/dem/STLImporter.hpp:130:5: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result]
     fscanf(fp, "%*s %*s");
     ^
/home/son/Desktop/myYade/trunk/pkg/dem/STLImporter.hpp:131:5: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result]
     fscanf(fp, "%*s %f %f %f\n", &v[0][0],  &v[0][1],  &v[0][2]);
     ^
/home/son/Desktop/myYade/trunk/pkg/dem/STLImporter.hpp:132:5: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result]
     fscanf(fp, "%*s %f %f %f\n", &v[1][0],  &v[1][1],  &v[1][2]);
     ^
/home/son/Desktop/myYade/trunk/pkg/dem/STLImporter.hpp:133:5: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result]
     fscanf(fp, "%*s %f %f %f\n", &v[2][0],  &v[2][1],  &v[2][2]);
     ^
/home/son/Desktop/myYade/trunk/pkg/dem/STLImporter.hpp:134:5: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result]
     fscanf(fp, "%*s"); // end loop
     ^
/home/son/Desktop/myYade/trunk/pkg/dem/STLImporter.hpp:135:5: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result]
     fscanf(fp, "%*s"); // end facet
     ^
[ 74%] Building CXX object CMakeFiles/yade.dir/pkg/dem/SimpleShear.cpp.o
[ 75%] Building CXX object CMakeFiles/yade.dir/pkg/dem/UniaxialStrainer.cpp.o
[ 75%] Building CXX object CMakeFiles/yade.dir/pkg/dem/KnKsLaw.cpp.o
[ 76%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Integrator.cpp.o
[ 76%] Building CXX object CMakeFiles/yade.dir/pkg/dem/GeneralIntegratorInsertionSortCollider.cpp.o
[ 77%] Building CXX object CMakeFiles/yade.dir/pkg/dem/KinemC__Engine.cpp.o
[ 78%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Polyhedra_Ig2.cpp.o
[ 78%] Building CXX object CMakeFiles/yade.dir/pkg/dem/TriaxialCompressionEngine.cpp.o
[ 79%] Building CXX object CMakeFiles/yade.dir/pkg/dem/FlatGridCollider.cpp.o
[ 79%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Shop_01.cpp.o
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1761:0,
                 from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17,
                 from /home/son/Desktop/myYade/trunk/py/_utils.hpp:14,
                 from /home/son/Desktop/myYade/trunk/pkg/dem/Shop_01.cpp:46:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 #warning "Using deprecated NumPy API, disable it by " \
  ^
[ 80%] Building CXX object CMakeFiles/yade.dir/pkg/dem/SpherePack.cpp.o
[ 81%] Building CXX object CMakeFiles/yade.dir/pkg/dem/SnapshotEngine.cpp.o
[ 81%] Building CXX object CMakeFiles/yade.dir/pkg/dem/NormalInelasticPM.cpp.o
[ 82%] Building CXX object CMakeFiles/yade.dir/pkg/dem/ScGeom.cpp.o
[ 82%] Building CXX object CMakeFiles/yade.dir/pkg/dem/GlobalStiffnessTimeStepper.cpp.o
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:26:0,
                 from /home/son/Desktop/myYade/trunk/py/_utils.hpp:14,
                 from /home/son/Desktop/myYade/trunk/pkg/dem/Shop_01.cpp:46:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/__multiarray_api.h:1629:1: warning: ‘int _import_array()’ defined but not used [-Wunused-function]
 _import_array(void)
 ^
[ 83%] Building CXX object CMakeFiles/yade.dir/pkg/dem/UnbalancedForceCallbacks.cpp.o
[ 84%] Building CXX object CMakeFiles/yade.dir/pkg/dem/TriaxialStateRecorder.cpp.o
[ 84%] Building CXX object CMakeFiles/yade.dir/pkg/dem/MicroMacroAnalyser.cpp.o
[ 85%] Building CXX object CMakeFiles/yade.dir/pkg/dem/RungeKuttaCashKarp54Integrator.cpp.o
[ 85%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Polyhedra_splitter.cpp.o
[ 86%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Disp2DPropLoadEngine.cpp.o
[ 87%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Shop_02.cpp.o
[ 87%] Building CXX object CMakeFiles/yade.dir/pkg/dem/KinemSimpleShearBox.cpp.o
[ 88%] Building CXX object CMakeFiles/yade.dir/pkg/dem/CapillaryPhys.cpp.o
[ 88%] Building CXX object CMakeFiles/yade.dir/pkg/dem/JointedCohesiveFrictionalPM.cpp.o
[ 89%] Building CXX object CMakeFiles/yade.dir/pkg/dem/L3Geom.cpp.o
[ 90%] Building CXX object CMakeFiles/yade.dir/pkg/dem/TriaxialTest.cpp.o
[ 90%] Building CXX object CMakeFiles/yade.dir/pkg/dem/DomainLimiter.cpp.o
[ 91%] Building CXX object CMakeFiles/yade.dir/lib/base/Math.cpp.o
[ 91%] Building CXX object CMakeFiles/yade.dir/lib/factory/ClassFactory.cpp.o
[ 92%] Building CXX object CMakeFiles/yade.dir/lib/factory/DynLibManager.cpp.o
[ 93%] Building CXX object CMakeFiles/yade.dir/lib/serialization/Serializable.cpp.o
[ 93%] Building CXX object CMakeFiles/yade.dir/lib/pyutil/gil.cpp.o
[ 94%] Building CXX object CMakeFiles/yade.dir/core/main/pyboot.cpp.o
[ 94%] Building CXX object CMakeFiles/yade.dir/lib/opengl/GLUtils.cpp.o
[ 95%] Building CXX object CMakeFiles/yade.dir/lib/triangulation/Timer.cpp.o
[ 96%] Building CXX object CMakeFiles/yade.dir/lib/triangulation/Tenseur3.cpp.o
[ 96%] Building CXX object CMakeFiles/yade.dir/lib/triangulation/KinematicLocalisationAnalyser.cpp.o
[ 97%] Building CXX object CMakeFiles/yade.dir/lib/triangulation/TriaxialState.cpp.o
[ 98%] Building CXX object CMakeFiles/yade.dir/lib/triangulation/basicVTKwritter.cpp.o
Linking CXX shared library lib/x86_64-linux-gnu/libyade.so
[ 98%] Built target yade
Scanning dependencies of target boot
Scanning dependencies of target _packPredicates
Scanning dependencies of target _customConverters
Scanning dependencies of target _packSpheres
[ 99%] [100%] [100%] Building CXX object py/CMakeFiles/_packSpheres.dir/pack/_packSpheres.cpp.o
Building CXX object py/CMakeFiles/_customConverters.dir/wrapper/customConverters.cpp.o
Building CXX object CMakeFiles/boot.dir/core/main/pyboot.cpp.o
[100%] Building CXX object py/CMakeFiles/_packPredicates.dir/pack/_packPredicates.cpp.o
Linking CXX shared library lib/x86_64-linux-gnu/boot.so
Linking CXX shared library lib/x86_64-linux-gnu/_packPredicates.so
[100%] Built target boot
Scanning dependencies of target _utils
[100%] Building CXX object py/CMakeFiles/_utils.dir/_utils.cpp.o
[100%] Built target _packPredicates
Scanning dependencies of target wrapper
[100%] Building CXX object py/CMakeFiles/wrapper.dir/wrapper/yadeWrapper.cpp.o
Linking CXX shared library lib/x86_64-linux-gnu/_packSpheres.so
[100%] Built target _packSpheres
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1761:0,
                 from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17,
                 from /home/son/Desktop/myYade/trunk/py/_utils.hpp:14,
                 from /home/son/Desktop/myYade/trunk/py/_utils.cpp:1:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: #warning "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 #warning "Using deprecated NumPy API, disable it by " \
  ^
Linking CXX shared library lib/x86_64-linux-gnu/_customConverters.so
[100%] Built target _customConverters
Linking CXX shared library lib/x86_64-linux-gnu/wrapper.so
[100%] Built target wrapper
Linking CXX shared library lib/x86_64-linux-gnu/_utils.so
[100%] Built target _utils

son@son-desktop:~/Desktop/myYade/build$ make install
[  6%] Built target _GLViewer
[ 96%] Built target yade
[ 97%] Built target boot
[ 97%] Built target WeightedAverage2d
[ 97%] Built target _customConverters
[ 98%] Built target _packObb
[ 98%] Built target _packPredicates
[ 99%] Built target _packSpheres
[100%] Built target _polyhedra_utils
[100%] Built target _utils
[100%] Built target wrapper
Install the project...
-- Install configuration: ""
-- Installing: /home/son/Desktop/myYade/install/bin/yade-2016.06a-batch
-- Installing: /home/son/Desktop/myYade/install/bin/yade-2016.06a
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/config.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/__init__.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/checks/checkWeight.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/checks/checkGravity.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/checks/checkClumpHopper.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/checks/checkCapillaryModels.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/checks/checkViscElPM.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/checks/checkTestNormalInelasticity.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/checks/checkTestTriax.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/checks/checkPolyhedraCrush.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/checks/checkLiquidMigration.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/checks/checkList.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/checks/checkViscElEng.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/checks/checkViscElPM2.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/checks/checkTestDummy.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/checks/DEM-PFV-check.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/checks/checkWirePM.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/checks/checkSaveLoadClumps.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/checks/data/100spheres
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/checks/data/checkTestTriax.spheres
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/checks/data/WallStressesCheckTest
-- Installing: /home/son/Desktop/myYade/install/share/doc/yade-2016.06a/img/yade-logo-note.png
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/boot.so
-- Set runtime path of "/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/boot.so" to "/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/qt:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/gts"
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/libyade.so
-- Set runtime path of "/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/libyade.so" to "/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/qt:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/gts"
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/qt/_GLViewer.so
-- Set runtime path of "/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/qt/_GLViewer.so" to "/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/qt:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/gts"
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/qt/SerializableEditor.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/qt/Inspector.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/qt/__init__.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/qt/img_rc.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/qt/ui_controller.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/polyhedra_utils.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/_extraDocs.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/post2d.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/geom.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/params.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/export.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/ymport.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/runtime.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/bodiesHandling.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/deformableelementsutils.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/plot.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/linterpolation.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/system.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/timing.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/remote.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/utils.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/gridpfacet.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/pack.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/mtTkinter.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/engines.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/core.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/wrapper.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/cohesive-chain.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/clump.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/__init__.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/pbc.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/checks/performance/performance.db
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/tests/checks/performance/checkPerf.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/FEMxDEM/simDEM.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/FEMxDEM/msFEM3D.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/FEMxDEM/msFEM2D.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/FEMxDEM/mpipool.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/FEMxDEM/saveGauss.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/FEMxDEM/msFEMup.py
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/WeightedAverage2d.so
-- Set runtime path of "/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/WeightedAverage2d.so" to "/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/qt:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/gts"
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/_utils.so
-- Set runtime path of "/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/_utils.so" to "/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/qt:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/gts"
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/_polyhedra_utils.so
-- Set runtime path of "/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/_polyhedra_utils.so" to "/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/qt:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/gts"
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/_packPredicates.so
-- Set runtime path of "/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/_packPredicates.so" to "/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/qt:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/gts"
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/_packSpheres.so
-- Set runtime path of "/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/_packSpheres.so" to "/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/qt:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/gts"
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/_packObb.so
-- Set runtime path of "/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/_packObb.so" to "/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/qt:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/gts"
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/wrapper.so
-- Set runtime path of "/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/wrapper.so" to "/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/qt:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/gts"
-- Installing: /home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/_customConverters.so
-- Set runtime path of "/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/_customConverters.so" to "/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/yade/qt:/home/son/Desktop/myYade/install/lib/x86_64-linux-gnu/yade-2016.06a/py/gts"

cd

cd Desktop/myYade/install/bin


son@son-desktop:/Desktop/myYade/install/bin$ ./yade-1.14.0
son@son-desktop:/Desktop/myYade/install/bin$ ./yade-1.20.0

son@son-desktop:/Desktop/myYade/install/bin$ ./yade-2016.06a
Welcome to Yade 2016.06a
TCP python prompt on localhost:9000, auth cookie `aseyku'
XMLRPC info provider on http://localhost:21000
[[ ^L clears screen, ^U kills line. F12 controller, F11 3d view (use h-key for showing help), F10 both, F9 generator, F8 plot. ]]


And I got: NameError: name 'TwoPhaseFlowEngine' is not defined

Before these re-installations, I had no problem with these Flow Engines.

Any idea about how to solve this would be greatly appreciated!

Thanks,

Son

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