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[Question #668298]: Install on Ubuntu 16.04 from source

 

New question #668298 on Yade:
https://answers.launchpad.net/yade/+question/668298

I have typed the following commands and installed the minieigen package

gcf@gcf-OptiPlex-9020:/media/gcf/3TB-FOUR/YadeWC/build$ sudo apt-get install python3-minieigen
Reading package lists... Done
Building dependency tree       
Reading state information... Done
python3-minieigen is already the newest version (0.50.3+dfsg1-4build1).
0 upgraded, 0 newly installed, 0 to remove and 18 not upgraded.


BUT when i excute 'cmake' , it turns out that i have not installed the minieigen:

gcf@gcf-OptiPlex-9020:/media/gcf/3TB-FOUR/YadeWC/build$ cmake -DCMAKE_INSTALL_PREFIX=../install ../trunk-2018.02b/
-- The C compiler identification is GNU 5.4.0
-- The CXX compiler identification is GNU 5.4.0
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found PythonInterp: /home/gcf/anaconda3/bin/python (found version "3.6.3") 
CMake Warning (dev) at /home/gcf/anaconda3/share/cmake-3.9/Modules/FindOpenMP.cmake:200 (if):
  Policy CMP0054 is not set: Only interpret if() arguments as variables or
  keywords when unquoted.  Run "cmake --help-policy CMP0054" for policy
  details.  Use the cmake_policy command to set the policy and suppress this
  warning.

  Quoted variables like "c" will no longer be dereferenced when the policy is
  set to NEW.  Since the policy is not set the OLD behavior will be used.
Call Stack (most recent call first):
  /home/gcf/anaconda3/share/cmake-3.9/Modules/FindOpenMP.cmake:324 (_OPENMP_GET_FLAGS)
  CMakeLists.txt:37 (INCLUDE)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found OpenMP_C: -fopenmp (found version "4.0") 
-- Found OpenMP_CXX: -fopenmp (found version "4.0") 
-- Looking for Q_WS_X11
-- Looking for Q_WS_X11 - found
-- Looking for Q_WS_WIN
-- Looking for Q_WS_WIN - not found
-- Looking for Q_WS_QWS
-- Looking for Q_WS_QWS - not found
-- Looking for Q_WS_MAC
-- Looking for Q_WS_MAC - not found
-- Found Qt4: /usr/bin/qmake-qt4 (found version "4.8.7") 
-- Found PkgConfig: /usr/bin/pkg-config (found version "0.29.1") 
-- Version is set to 2018.02b
-- Found OpenGL: /usr/lib/x86_64-linux-gnu/libGL.so  
-- GTS using gts-config /usr/bin/gts-config
-- Using GTS from /usr
-- Found GL2PS: /usr/lib/libgl2ps.so  
-- Found CGAL: /usr/include, /usr/lib/x86_64-linux-gnu/libCGAL.so
-- Found NumPy: version "1.13.3" /home/gcf/anaconda3/lib/python3.6/site-packages/numpy/core/include
-- Found Loki: /usr/include  
-- GCC Version >= 4.8. Adding -ftrack-macro-expansion=0 and -save-temps
-- GCC Version >= 4.9. Adding -fstack-protector-strong
CMake Warning at /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:786 (message):
  New Boost version may have incorrect or missing dependencies and imported
  targets
Call Stack (most recent call first):
  /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:892 (_Boost_COMPONENT_DEPENDENCIES)
  /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:1523 (_Boost_MISSING_DEPENDENCIES)
  CMakeLists.txt:95 (FIND_PACKAGE)


CMake Warning at /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:786 (message):
  New Boost version may have incorrect or missing dependencies and imported
  targets
Call Stack (most recent call first):
  /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:892 (_Boost_COMPONENT_DEPENDENCIES)
  /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:1523 (_Boost_MISSING_DEPENDENCIES)
  CMakeLists.txt:95 (FIND_PACKAGE)


CMake Warning at /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:786 (message):
  New Boost version may have incorrect or missing dependencies and imported
  targets
Call Stack (most recent call first):
  /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:892 (_Boost_COMPONENT_DEPENDENCIES)
  /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:1523 (_Boost_MISSING_DEPENDENCIES)
  CMakeLists.txt:95 (FIND_PACKAGE)


CMake Warning at /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:786 (message):
  New Boost version may have incorrect or missing dependencies and imported
  targets
Call Stack (most recent call first):
  /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:892 (_Boost_COMPONENT_DEPENDENCIES)
  /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:1523 (_Boost_MISSING_DEPENDENCIES)
  CMakeLists.txt:95 (FIND_PACKAGE)


CMake Warning at /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:786 (message):
  New Boost version may have incorrect or missing dependencies and imported
  targets
Call Stack (most recent call first):
  /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:892 (_Boost_COMPONENT_DEPENDENCIES)
  /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:1523 (_Boost_MISSING_DEPENDENCIES)
  CMakeLists.txt:95 (FIND_PACKAGE)


CMake Warning at /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:786 (message):
  New Boost version may have incorrect or missing dependencies and imported
  targets
Call Stack (most recent call first):
  /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:892 (_Boost_COMPONENT_DEPENDENCIES)
  /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:1523 (_Boost_MISSING_DEPENDENCIES)
  CMakeLists.txt:95 (FIND_PACKAGE)


CMake Warning at /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:786 (message):
  New Boost version may have incorrect or missing dependencies and imported
  targets
Call Stack (most recent call first):
  /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:892 (_Boost_COMPONENT_DEPENDENCIES)
  /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:1523 (_Boost_MISSING_DEPENDENCIES)
  CMakeLists.txt:95 (FIND_PACKAGE)


CMake Warning at /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:786 (message):
  New Boost version may have incorrect or missing dependencies and imported
  targets
Call Stack (most recent call first):
  /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:892 (_Boost_COMPONENT_DEPENDENCIES)
  /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:1523 (_Boost_MISSING_DEPENDENCIES)
  CMakeLists.txt:95 (FIND_PACKAGE)


CMake Warning at /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:786 (message):
  New Boost version may have incorrect or missing dependencies and imported
  targets
Call Stack (most recent call first):
  /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:892 (_Boost_COMPONENT_DEPENDENCIES)
  /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:1523 (_Boost_MISSING_DEPENDENCIES)
  CMakeLists.txt:95 (FIND_PACKAGE)


CMake Warning at /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:786 (message):
  New Boost version may have incorrect or missing dependencies and imported
  targets
Call Stack (most recent call first):
  /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:892 (_Boost_COMPONENT_DEPENDENCIES)
  /home/gcf/anaconda3/share/cmake-3.9/Modules/FindBoost.cmake:1523 (_Boost_MISSING_DEPENDENCIES)
  CMakeLists.txt:95 (FIND_PACKAGE)


-- Looking for pthread.h
-- Looking for pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE  
-- Boost version: 1.67.0
-- Found the following Boost libraries:
--   python
--   thread
--   filesystem
--   iostreams
--   regex
--   serialization
--   system
--   date_time
--   chrono
--   atomic
--   Boost_VERSION: 106700
--   Boost_LIB_VERSION: 1_67
--   Boost_INCLUDE_DIRS: /usr/local/include
--   Boost_LIBRARIES: /usr/lib/x86_64-linux-gnu/libboost_python.so/usr/lib/x86_64-linux-gnu/libboost_thread.so/usr/lib/x86_64-linux-gnu/libboost_filesystem.so/usr/lib/x86_64-linux-gnu/libboost_iostreams.so/usr/lib/x86_64-linux-gnu/libboost_regex.so/usr/lib/x86_64-linux-gnu/libboost_serialization.so/usr/lib/x86_64-linux-gnu/libboost_system.so/usr/lib/x86_64-linux-gnu/libboost_date_time.so/usr/lib/x86_64-linux-gnu/libboost_chrono.so/usr/lib/x86_64-linux-gnu/libboost_atomic.so
-- Found Eigen3: /usr/local/include/eigen3 (Required is at least version "2.91.0") 
-- Found BZip2: /usr/lib/x86_64-linux-gnu/libbz2.so (found version "1.0.6") 
-- Looking for BZ2_bzCompressInit
-- Looking for BZ2_bzCompressInit - found
-- Found ZLIB: /usr/local/lib/libz.so (found version "1.2.9") 
-- Found PythonLibs: /usr/lib/x86_64-linux-gnu/libpython2.7.so (found version "2.7.12") 
-- Found Eigen3, version: 3.3.90
-- Disable vectorization
-- Found VTK
-- Found OpenMP_C: -fopenmp (found version "4.0") 
-- Found OpenMP_CXX: -fopenmp (found version "4.0") 
-- Found OpenMP
-- GTS using gts-config /usr/bin/gts-config
-- Using GTS from /usr
-- Checking for one of the modules 'glib-2.0'
-- Found GLib2: glib-2.0 /usr/include/glib-2.0;/usr/lib/x86_64-linux-gnu/glib-2.0/include
-- Looking for include file glib/gregex.h
-- Looking for include file glib/gregex.h - not found
-- Found GTS
-- Found GLUT: /usr/lib/x86_64-linux-gnu/libglut.so  
-- Found QGLVIEWER-qt5: /usr/include/QGLViewer  
-- Found GUI-Qt5-LIBS
-- GMP libs: /usr/lib/x86_64-linux-gnu/libgmp.so /usr/lib/x86_64-linux-gnu/libgmpxx.so
-- Found GMP: /usr/include/x86_64-linux-gnu  
-- GMP libs: /usr/lib/x86_64-linux-gnu/libgmp.so /usr/lib/x86_64-linux-gnu/libgmpxx.so
-- Found CGAL
-- SuiteSparse version 4.4.6 found, CHOLMOD direct solver for CPU activated.
-- Found Cholmod: /usr/lib/x86_64-linux-gnu/libcholmod.so  
-- Found OpenBlas: /usr/lib/libopenblas.so  
-- Found Metis: /usr/local/include  
-- Found Cholmod in /usr/lib/x86_64-linux-gnu/libcholmod.so
-- Found OpenBlas in /usr/lib/libopenblas.so
-- Found Metis in /usr/local/lib/libmetis.a
-- Found GL2PS
LBMFLOW is still experimental, building and running LBM engine are at your own risk!
Yade will be installed to /media/gcf/3TB-FOUR/YadeWC/install
-- Suffix is set to -2018.02b
-- LIBRARY_OUTPUT_PATH is set to lib/x86_64-linux-gnu
-- runtimePREFIX is set to /media/gcf/3TB-FOUR/YadeWC/install
-- Could NOT find gts (missing: PY_gts) 
-- Use embedded version of gts. Please, consider installing the corresponding package
CMake Error at /home/gcf/anaconda3/share/cmake-3.9/Modules/FindPackageHandleStandardArgs.cmake:137 (message):
  Could NOT find minieigen (missing: PY_minieigen)
Call Stack (most recent call first):
  /home/gcf/anaconda3/share/cmake-3.9/Modules/FindPackageHandleStandardArgs.cmake:377 (_FPHSA_FAILURE_MESSAGE)
  cMake/FindPythonModule.cmake:22 (FIND_PACKAGE_HANDLE_STANDARD_ARGS)
  CMakeLists.txt:559 (find_python_module)


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