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Re: [Question #679428]: unable to display sphere with latest version

To: yade-users@xxxxxxxxxxxxxxxxxxx
From: Janek Kozicki <question679428@xxxxxxxxxxxxxxxxxxxxx>
Date: Sun, 21 Apr 2019 02:13:26 -0000
Reply-to: question679428@xxxxxxxxxxxxxxxxxxxxx
Sender: bounces@xxxxxxxxxxxxx
Question #679428 on Yade changed:
https://answers.launchpad.net/yade/+question/679428

    Status: Open => Answered

Janek Kozicki proposed the following answer:
I suspect qt. See on installation page the „
Warning

To provide Qt4->Qt5 migration one needs.....”
On 19 Apr 2019, 14:43 +0200, Luc OGER <question679428@xxxxxxxxxxxxxxxxxxxxx>, wrote:
> Question #679428 on Yade changed:
> https://answers.launchpad.net/yade/+question/679428
>
> Status: Answered => Open
>
> Luc OGER is still having a problem:
> new research for solving my problem: here the debug answer with latest
> verison 15/04/2019 with qt5 and python 2.7 on Opnsuse 15.0
>
> DEBUG /home/oger/Yade/trunk/core/Omega.cpp:140 buildDynlibDatabase: Factoring plugin ZECollider
> DEBUG /home/oger/Yade/trunk/pkg/dem/FlatGridCollider.cpp:44 initIndices: sphereIdx=1
> DEBUG /home/oger/Yade/trunk/pkg/dem/FlatGridCollider.cpp:44 initIndices: sphereIdx=1
> TCP python prompt on localhost:9000, auth cookie `kecyds'
> XMLRPC info provider on http://localhost:21000
> DEBUG /home/oger/Yade/trunk/pkg/common/OpenGLRenderer.cpp:66 initgl: (re)initializing GL for gldraw methods.
>
> qt5ct: using qt5ct plugin
> Running script 01-bouncing-sphere.py
> INFO /home/oger/Yade/trunk/core/Omega.cpp:265 saveSimulation: Saving file :memory:
> [[ ^L clears screen, ^U kills line. F12 controller, F11 3D view (press "h" in 3D view for help), F10 both, F9 generator, F8 plot. ]]
>
> In [1]: QXcbConnection: XCB error: 145 (Unknown), sequence: 171, resource id: 0, major code: 139 (Unknown), minor code: 20
> inotify_add_watch("/home/oger/.config/qt5ct") failed: "No such file or directory"
>
>
> In [2]: INFO /home/oger/Yade/trunk/gui/qt5/GLViewer.cpp:350 centerScene: Select with shift, press 'm' to move.
> DEBUG /home/oger/Yade/trunk/gui/qt5/GLViewer.cpp:359 centerScene: scene's bound not yet calculated or has zero or nan dimension(s), attempt get that from bodies' positions.
> DEBUG /home/oger/Yade/trunk/gui/qt5/GLViewer.cpp:370 centerScene: Got scene box min=0 0 0 and max=0 0 2
> DEBUG /home/oger/Yade/trunk/gui/qt5/GLViewer.cpp:374 centerScene: Scene center=0 0 1, halfSize=0 0 1, radius=1
> INFO /home/oger/Yade/trunk/gui/qt5/GLViewer.cpp:350 centerScene: Select with shift, press 'm' to move.
> DEBUG /home/oger/Yade/trunk/gui/qt5/GLViewer.cpp:359 centerScene: scene's bound not yet calculated or has zero or nan dimension(s), attempt get that from bodies' positions.
> DEBUG /home/oger/Yade/trunk/gui/qt5/GLViewer.cpp:370 centerScene: Got scene box min=0 0 0 and max=0 0 2
> DEBUG /home/oger/Yade/trunk/gui/qt5/GLViewer.cpp:374 centerScene: Scene center=0 0 1, halfSize=0 0 1, radius=1
> SIGSEGV/SIGABRT handler called; gdb batch file is `/tmp/yade-YVDdwH/tmp-0'
> GNU gdb (GDB; openSUSE Leap 15.0) 8.2
> Copyright (C) 2018 Free Software Foundation, Inc.
> License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>
> This is free software: you are free to change and redistribute it.
> There is NO WARRANTY, to the extent permitted by law.
> Type "show copying" and "show warranty" for details.
> This GDB was configured as "x86_64-suse-linux".
> Type "show configuration" for configuration details.
> For bug reporting instructions, please see:
> <http://bugs.opensuse.org/>.
> Find the GDB manual and other documentation resources online at:
> <http://www.gnu.org/software/gdb/documentation/>.
>
> For help, type "help".
> Type "apropos word" to search for commands related to "word".
> [New LWP 12572]
> [New LWP 12573]
>
> [New LWP 12594]
> [New LWP 13036]
> Missing separate debuginfo for /usr/bin/python2.7
>
>
> /tmp/yade-YVDdwH/tmp-0:3: Error in sourced command file:
> Invalid thread ID: info
> (gdb)
> infp threads
>
> Id Target Id Frame
> * 1 Thread 0x7fe0619c34c0 (LWP 12567) "yade-2019-04-15" 0x00007fe060e8cd97 in waitpid () from /lib64/libc.so.6
> 2 Thread 0x7fe03d83e700 (LWP 12572) "WorkerThread" 0x00007fe060eb6ef3 in select () from /lib64/libc.so.6
> 3 Thread 0x7fe03d03d700 (LWP 12573) "WorkerThread" 0x00007fe060eb6ef3 in select () from /lib64/libc.so.6
> 4 Thread 0x7fe02a1be700 (LWP 12574) "yade-2019-04-15" 0x00007fe06118e8ad in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
> 5 Thread 0x7fe02231c700 (LWP 12575) "llvmpipe-0" 0x00007fe06118e8ad in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
> 6 Thread 0x7fe021b1b700 (LWP 12576) "llvmpipe-1" 0x00007fe06118e8ad in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
> 7 Thread 0x7fe02131a700 (LWP 12577) "llvmpipe-2" 0x00007fe06118e8ad in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
> 8 Thread 0x7fe01cb19700 (LWP 12578) "llvmpipe-3" 0x00007fe06118e8ad in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
> 9 Thread 0x7fe020b19700 (LWP 12579) "llvmpipe-4" 0x00007fe06118e8ad in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
> 10 Thread 0x7fe020318700 (LWP 12580) "llvmpipe-5" 0x00007fe06118e8ad in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
> 11 Thread 0x7fe01fb17700 (LWP 12581) "llvmpipe-6" 0x00007fe06118e8ad in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
> 12 Thread 0x7fe01f316700 (LWP 12582) "llvmpipe-7" 0x00007fe06118e8ad in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
> 13 Thread 0x7fe01775f700 (LWP 12583) "QXcbEventReader" 0x00007fe060eb507b in poll () from /lib64/libc.so.6
> 14 Thread 0x7fe01608e700 (LWP 12584) "yade-2019-04-15" 0x00007fe061191246 in do_futex_wait.constprop () from /lib64/libpthread.so.0
> 15 Thread 0x7fdfed247700 (LWP 12585) "QDBusConnection" 0x00007fe060eb507b in poll () from /lib64/libc.so.6
> 16 Thread 0x7fdfec98d700 (LWP 12587) "llvmpipe-0" 0x00007fe06118e8ad in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
> 17 Thread 0x7fdfe7fff700 (LWP 12588) "llvmpipe-1" 0x00007fe06118e8ad in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
> 18 Thread 0x7fdfdf7fe700 (LWP 12589) "llvmpipe-2" 0x00007fe06118e8ad in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
> 19 Thread 0x7fdfe77fe700 (LWP 12590) "llvmpipe-3" 0x00007fe06118e8ad in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
> 20 Thread 0x7fdfe6ffd700 (LWP 12591) "llvmpipe-4" 0x00007fe06118e8ad in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
> 21 Thread 0x7fdfe67fc700 (LWP 12592) "llvmpipe-5" 0x00007fe06118e8ad in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
> 22 Thread 0x7fdfe5ffb700 (LWP 12593) "llvmpipe-6" 0x00007fe06118e8ad in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
> 23 Thread 0x7fdfe57fa700 (LWP 12594) "llvmpipe-7" 0x00007fe06118e8ad in pthread_cond_wait@@GLIBC_2.3.2 () from /lib64/libpthread.so.0
> 24 Thread 0x7fdfdffff700 (LWP 13036) "yade-2019-04-15" 0x00007fe060eb6ef3 in select () from /lib64/libc.so.6
>
>
> (gdb) Undefined command: "py-bt". Try "help".
> (gdb) Breakpoint 1 at 0x7fe060e8cd97
> (gdb) Note: breakpoint 1 also set at pc 0x7fe060e8cd97.
> Breakpoint 2 at 0x7fe060e8cd97
> (gdb) #0 0x00007fe060e8cd97 in waitpid () at /lib64/libc.so.6
> #1 0x00007fe060e0a42f in do_system () at /lib64/libc.so.6
> #2 0x00007fe05ea13de5 in crashHandler(int) (sig=11) at /home/oger/Yade/trunk/core/main/pyboot.cpp:13
> #3 0x00007fe060dfd160 in <signal handler called> () at /lib64/libc.so.6
> #4 0x00007fe056148743 in fghDrawGeometrySolid () at /usr/lib64/libglut.so.3
> #5 0x00007fe05614955c in () at /usr/lib64/libglut.so.3
> #6 0x00007fe05cf9b68c in Gl1_Sphere::initGlutGlList() (this=<optimized out>) at /home/oger/Yade/trunk/pkg/common/Gl1_Primitives.cpp:248
> #7 0x00007fe05cf9c8bd in Gl1_Sphere::go(boost::shared_ptr<Shape> const&, boost::shared_ptr<State> const&, bool, GLViewInfo const&) (this=0x55eb60fd2ad0, cm=..., wire2=<optimized out>) at /home/oger/Yade/trunk/pkg/common/Gl1_Primitives.cpp:146
> #8 0x00007fe05d0db3c7 in DynLibDispatcher<Loki::Typelist<Shape, Loki::NullType>, GlShapeFunctor, void, Loki::Typelist<boost::shared_ptr<Shape> const&, Loki::Typelist<boost::shared_ptr<State> const&, Loki::Typelist<bool, Loki::Typelist<GLViewInfo const&, Loki::NullType> > > >, true>::operator()<boost::shared_ptr<State>, bool, GLViewInfo>(boost::shared_ptr<Shape>&, boost::shared_ptr<State>, bool, GLViewInfo) (base=..., this=0x55eb60fd1128) at /home/oger/Yade/trunk/lib/multimethods/DynLibDispatcher.hpp:367
> #9 0x00007fe05d0db3c7 in OpenGLRenderer::renderShape() (this=this@entry=0x55eb60fd0e50) at /home/oger/Yade/trunk/pkg/common/OpenGLRenderer.cpp:359
> #10 0x00007fe05d0dc4f5 in OpenGLRenderer::render(boost::shared_ptr<Scene> const&, int) (this=0x55eb60fd0e50, _scene=..., selection=<optimized out>) at /home/oger/Yade/trunk/pkg/common/OpenGLRenderer.cpp:210
> #11 0x00007fe0565de5e1 in GLViewer::draw() (this=0x55eb60bcb480) at /home/oger/Yade/trunk/gui/qt5/GLViewerDisplay.cpp:127
> #12 0x00007fe05155742d in QGLViewer::paintGL() () at /usr/local/lib/libQGLViewer-qt5.so.2
> #13 0x00007fe050a86544 in QGLWidget::glDraw() () at /usr/lib64/libQt5OpenGL.so.5
> #14 0x00007fe050a85f7d in QGLWidget::paintEvent(QPaintEvent*) () at /usr/lib64/libQt5OpenGL.so.5
> #15 0x00007fe0503cfcd8 in QWidget::event(QEvent*) () at /usr/lib64/libQt5Widgets.so.5
> #16 0x00007fe050393e8c in QApplicationPrivate::notify_helper(QObject*, QEvent*) () at /usr/lib64/libQt5Widgets.so.5
> #17 0x00007fe05039b244 in QApplication::notify(QObject*, QEvent*) () at /usr/lib64/libQt5Widgets.so.5
> #18 0x00007fe037a237de in () at /usr/lib64/python2.7/site-packages/PyQt5/QtWidgets.so
> #19 0x00007fe054e20a88 in QCoreApplication::notifyInternal2(QObject*, QEvent*) () at /usr/lib64/libQt5Core.so.5
> #20 0x00007fe0503c92ea in QWidgetPrivate::sendPaintEvent(QRegion const&) () at /usr/lib64/libQt5Widgets.so.5
> #21 0x00007fe0503c9861 in QWidgetPrivate::drawWidget(QPaintDevice*, QRegion const&, QPoint const&, int, QPainter*, QWidgetBackingStore*) () at /usr/lib64/libQt5Widgets.so.5
> #22 0x00007fe0503a0f4a in QWidgetPrivate::repaint_sys(QRegion const&) () at /usr/lib64/libQt5Widgets.so.5
> #23 0x00007fe0503ebdf6 in () at /usr/lib64/libQt5Widgets.so.5
> #24 0x00007fe0503ec753 in () at /usr/lib64/libQt5Widgets.so.5
> #25 0x00007fe050393e8c in QApplicationPrivate::notify_helper(QObject*, QEvent*) () at /usr/lib64/libQt5Widgets.so.5
> #26 0x00007fe05039b244 in QApplication::notify(QObject*, QEvent*) () at /usr/lib64/libQt5Widgets.so.5
> #27 0x00007fe037a237de in () at /usr/lib64/python2.7/site-packages/PyQt5/QtWidgets.so
> #28 0x00007fe054e20a88 in QCoreApplication::notifyInternal2(QObject*, QEvent*) () at /usr/lib64/libQt5Core.so.5
> #29 0x00007fe04fbd5fe9 in QGuiApplicationPrivate::processExposeEvent(QWindowSystemInterfacePrivate::ExposeEvent*) () at /usr/lib64/libQt5Gui.so.5
> #30 0x00007fe04fbd6b4d in QGuiApplicationPrivate::processWindowSystemEvent(QWindowSystemInterfacePrivate::WindowSystemEvent*) () at /usr/lib64/libQt5Gui.so.5
> #31 0x00007fe04fbaf65b in QWindowSystemInterface::sendWindowSystemEvents(QFlags<QEventLoop::ProcessEventsFlag>) () at /usr/lib64/libQt5Gui.so.5
> #32 0x00007fe01e6ae160 in () at /usr/lib64/libQt5XcbQpa.so.5
> #33 0x00007fe04e59ae07 in g_main_context_dispatch () at /usr/lib64/libglib-2.0.so.0
> #34 0x00007fe04e59b1b0 in () at /usr/lib64/libglib-2.0.so.0
> #35 0x00007fe04e59b23c in g_main_context_iteration () at /usr/lib64/libglib-2.0.so.0
> #36 0x00007fe054e76bff in QEventDispatcherGlib::processEvents(QFlags<QEventLoop::ProcessEventsFlag>) () at /usr/lib64/libQt5Core.so.5
> #37 0x00007fe054e1f09a in QEventLoop::exec(QFlags<QEventLoop::ProcessEventsFlag>) () at /usr/lib64/libQt5Core.so.5
> #38 0x00007fe03db9981b in () at /usr/lib64/python2.7/site-packages/PyQt5/QtCore.so
> #39 0x00007fe0614a85fa in PyEval_EvalFrameEx () at /usr/lib64/libpython2.7.so.1.0
> #40 0x00007fe0614a8cf7 in PyEval_EvalFrameEx () at /usr/lib64/libpython2.7.so.1.0
> #41 0x00007fe0614a7554 in PyEval_EvalCodeEx () at /usr/lib64/libpython2.7.so.1.0
> #42 0x00007fe0614ae3aa in PyEval_EvalFrameEx () at /usr/lib64/libpython2.7.so.1.0
> #43 0x00007fe0614a7554 in PyEval_EvalCodeEx () at /usr/lib64/libpython2.7.so.1.0
> #44 0x00007fe0614ae3aa in PyEval_EvalFrameEx () at /usr/lib64/libpython2.7.so.1.0
> #45 0x00007fe0614a7554 in PyEval_EvalCodeEx () at /usr/lib64/libpython2.7.so.1.0
> #46 0x00007fe0614ae3aa in PyEval_EvalFrameEx () at /usr/lib64/libpython2.7.so.1.0
> #47 0x00007fe0614a7554 in PyEval_EvalCodeEx () at /usr/lib64/libpython2.7.so.1.0
> #48 0x00007fe0614adebe in PyEval_EvalFrameEx () at /usr/lib64/libpython2.7.so.1.0
> #49 0x00007fe0614a7554 in PyEval_EvalCodeEx () at /usr/lib64/libpython2.7.so.1.0
> #50 0x00007fe0614ae3aa in PyEval_EvalFrameEx () at /usr/lib64/libpython2.7.so.1.0
> #51 0x00007fe0614a7554 in PyEval_EvalCodeEx () at /usr/lib64/libpython2.7.so.1.0
> #52 0x00007fe0614adebe in PyEval_EvalFrameEx () at /usr/lib64/libpython2.7.so.1.0
> #53 0x00007fe0614a7554 in PyEval_EvalCodeEx () at /usr/lib64/libpython2.7.so.1.0
> #54 0x00007fe0614adebe in PyEval_EvalFrameEx () at /usr/lib64/libpython2.7.so.1.0
> #55 0x00007fe0614a7554 in PyEval_EvalCodeEx () at /usr/lib64/libpython2.7.so.1.0
> #56 0x00007fe06145ca1e in () at /usr/lib64/libpython2.7.so.1.0
> #57 0x00007fe061447373 in PyObject_Call () at /usr/lib64/libpython2.7.so.1.0
> #58 0x00007fe06144fc6e in () at /usr/lib64/libpython2.7.so.1.0
> #59 0x00007fe061447373 in PyObject_Call () at /usr/lib64/libpython2.7.so.1.0
> #60 0x00007fe0614f8e7b in () at /usr/lib64/libpython2.7.so.1.0
> #61 0x00007fe061447373 in PyObject_Call () at /usr/lib64/libpython2.7.so.1.0
> #62 0x00007fe0614addbd in PyEval_EvalFrameEx () at /usr/lib64/libpython2.7.so.1.0
> #63 0x00007fe0614a7554 in PyEval_EvalCodeEx () at /usr/lib64/libpython2.7.so.1.0
> #64 0x00007fe0614adebe in PyEval_EvalFrameEx () at /usr/lib64/libpython2.7.so.1.0
> #65 0x00007fe0614a7554 in PyEval_EvalCodeEx () at /usr/lib64/libpython2.7.so.1.0
> #66 0x00007fe06150d419 in PyEval_EvalCode () at /usr/lib64/libpython2.7.so.1.0
> #67 0x00007fe061513e9f in () at /usr/lib64/libpython2.7.so.1.0
> #68 0x00007fe061513e42 in PyRun_FileExFlags () at /usr/lib64/libpython2.7.so.1.0
> #69 0x00007fe061513d3e in PyRun_SimpleFileExFlags () at /usr/lib64/libpython2.7.so.1.0
> #70 0x00007fe061519d19 in Py_Main () at /usr/lib64/libpython2.7.so.1.0
> #71 0x00007fe060de7f4a in __libc_start_main () at /lib64/libc.so.6
> #72 0x000055eb5f39a7fa in _start ()
> (gdb)
>
> the crash appears as soon as I click on View 3D otherwise everything is
> running!
>
> I look through the different cpp file defind in the thread list but I don't know how to go further?
> pyboot.cpp
> Gl1_Primitives.cpp
> OpenGLRenderer.cpp
> GLViewerDisplay.cpp
>
>
> could you give me some hints
>
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