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Re: csv import error

 

I suppose this would be the relevant part of the log (please only share the
last part of big logfiles):

* INFO  2013-04-22 11:02:06,912 Login success for user: 'mgarcia', ip:
'127.0.0.1' (DefaultUserAuditService.java [http-bio-8080-exec-9])
* WARN  2013-04-22 11:02:31,919 Unable to parse request (CommonsLogger.java
[http-bio-8080-exec-10])
org.apache.commons.fileupload.FileUploadBase$IOFileUploadException:
Processing of multipart/form-data request failed.
/home/dhis/tomcat/work/Catalina/localhost/dhis/upload_708b7bed_13e23ff20c3__8000_00000012.tmp
(Permission denied)
 at
org.apache.commons.fileupload.FileUploadBase.parseRequest(FileUploadBase.java:371)
at
org.apache.struts2.dispatcher.multipart.JakartaMultiPartRequest.parseRequest(JakartaMultiPartRequest.java:151)
 at
org.apache.struts2.dispatcher.multipart.JakartaMultiPartRequest.processUpload(JakartaMultiPartRequest.java:90)
at
org.apache.struts2.dispatcher.multipart.JakartaMultiPartRequest.parse(JakartaMultiPartRequest.java:80)
 at
org.apache.struts2.dispatcher.multipart.MultiPartRequestWrapper.<init>(MultiPartRequestWrapper.java:75)
at org.apache.struts2.dispatcher.Dispatcher.wrapRequest(Dispatcher.java:752)
 at
org.apache.struts2.dispatcher.FilterDispatcher.prepareDispatcherAndWrapRequest(FilterDispatcher.java:364)
at
org.apache.struts2.dispatcher.FilterDispatcher.doFilter(FilterDispatcher.java:404)
 at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
 at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:322)
at
org.springframework.security.web.access.intercept.FilterSecurityInterceptor.invoke(FilterSecurityInterceptor.java:116)
 at
org.springframework.security.web.access.intercept.FilterSecurityInterceptor.doFilter(FilterSecurityInterceptor.java:83)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334)
 at
org.springframework.security.web.access.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:113)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334)
 at
org.springframework.security.web.session.SessionManagementFilter.doFilter(SessionManagementFilter.java:103)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334)
 at
org.springframework.security.web.authentication.AnonymousAuthenticationFilter.doFilter(AnonymousAuthenticationFilter.java:113)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334)
 at
org.springframework.security.web.servletapi.SecurityContextHolderAwareRequestFilter.doFilter(SecurityContextHolderAwareRequestFilter.java:54)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334)
 at
org.springframework.security.web.savedrequest.RequestCacheAwareFilter.doFilter(RequestCacheAwareFilter.java:45)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334)
 at
org.springframework.security.web.authentication.www.BasicAuthenticationFilter.doFilter(BasicAuthenticationFilter.java:150)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334)
 at
org.springframework.security.web.authentication.AbstractAuthenticationProcessingFilter.doFilter(AbstractAuthenticationProcessingFilter.java:182)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334)
 at
org.hisp.dhis.security.filter.CustomAuthenticationFilter.doFilter(CustomAuthenticationFilter.java:54)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334)
 at
org.springframework.security.web.authentication.logout.LogoutFilter.doFilter(LogoutFilter.java:105)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334)
 at
org.hisp.dhis.security.filter.AutomaticAccessFilter.doFilter(AutomaticAccessFilter.java:112)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334)
 at
org.springframework.security.web.context.SecurityContextPersistenceFilter.doFilter(SecurityContextPersistenceFilter.java:87)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334)
 at
org.springframework.security.web.FilterChainProxy.doFilterInternal(FilterChainProxy.java:184)
at
org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:155)
 at
org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:346)
at
org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:259)
 at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
 at
org.springframework.orm.hibernate4.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:119)
at
org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:76)
 at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
 at
org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88)
at
org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:76)
 at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
 at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:224)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:169)
 at
org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:472)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:168)
 at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:98)
at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:927)
 at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:118)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:407)
 at
org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:987)
at
org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:579)
 at
org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java:309)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1110)
 at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603)
at java.lang.Thread.run(Thread.java:679)
Caused by: java.io.FileNotFoundException:
/home/dhis/tomcat/work/Catalina/localhost/dhis/upload_708b7bed_13e23ff20c3__8000_00000012.tmp
(Permission denied)
at java.io.FileOutputStream.open(Native Method)
 at java.io.FileOutputStream.<init>(FileOutputStream.java:209)
at java.io.FileOutputStream.<init>(FileOutputStream.java:160)
 at
org.apache.commons.io.output.DeferredFileOutputStream.thresholdReached(DeferredFileOutputStream.java:178)
at
org.apache.commons.io.output.ThresholdingOutputStream.checkThreshold(ThresholdingOutputStream.java:224)
 at
org.apache.commons.io.output.ThresholdingOutputStream.write(ThresholdingOutputStream.java:128)
at org.apache.commons.fileupload.util.Streams.copy(Streams.java:103)
 at org.apache.commons.fileupload.util.Streams.copy(Streams.java:66)
at
org.apache.commons.fileupload.FileUploadBase.parseRequest(FileUploadBase.java:366)
 ... 63 more
* WARN  2013-04-22 11:02:31,921 Processing of multipart/form-data request
failed.
/home/dhis/tomcat/work/Catalina/localhost/dhis/upload_708b7bed_13e23ff20c3__8000_00000012.tmp
(Permission denied) (CommonsLogger.java [http-bio-8080-exec-10])
* ERROR 2013-04-22 11:02:31,928 Error while executing action
(ExceptionInterceptor.java [http-bio-8080-exec-10])
java.lang.NullPointerException
at java.io.FileInputStream.<init>(FileInputStream.java:133)
 at
org.hisp.dhis.importexport.action.datavalue.ImportDataValueAction.execute(ImportDataValueAction.java:141)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
 at
sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at
sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
 at java.lang.reflect.Method.invoke(Method.java:616)
at
com.opensymphony.xwork2.DefaultActionInvocation.invokeAction(DefaultActionInvocation.java:453)
 at
com.opensymphony.xwork2.DefaultActionInvocation.invokeActionOnly(DefaultActionInvocation.java:292)
at
com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:255)
 at
org.hisp.dhis.webportal.interceptor.XWorkPortalUserInterceptor.intercept(XWorkPortalUserInterceptor.java:87)
at
com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:249)
 at
org.hisp.dhis.webportal.interceptor.XWorkPortalModuleInterceptor.intercept(XWorkPortalModuleInterceptor.java:90)
at
com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:249)
 at
org.hisp.dhis.webportal.interceptor.XWorkPortalMenuInterceptor.intercept(XWorkPortalMenuInterceptor.java:96)
at
com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:249)
 at
org.hisp.dhis.webportal.interceptor.XWorkPortalParamsInterceptor.intercept(XWorkPortalParamsInterceptor.java:118)
at
com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:249)
 at
org.hisp.dhis.interceptor.ContextInterceptor.intercept(ContextInterceptor.java:81)
at
com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:249)
 at
org.hisp.dhis.interceptor.UserSettingInterceptor.intercept(UserSettingInterceptor.java:80)
at
com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:249)
 at
org.hisp.dhis.security.intercept.LoginInterceptor.intercept(LoginInterceptor.java:84)
at
com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:249)
 at
org.hisp.dhis.security.intercept.XWorkSecurityInterceptor.intercept(XWorkSecurityInterceptor.java:103)
at
com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:249)
 at
org.hisp.dhis.interceptor.SystemSettingInterceptor.intercept(SystemSettingInterceptor.java:104)
at
com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:249)
 at
org.hisp.dhis.interceptor.I18nInterceptor.intercept(I18nInterceptor.java:137)
at
com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:249)
 at
com.opensymphony.xwork2.interceptor.ParametersInterceptor.doIntercept(ParametersInterceptor.java:211)
at
com.opensymphony.xwork2.interceptor.MethodFilterInterceptor.intercept(MethodFilterInterceptor.java:98)
 at
com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:249)
at
com.opensymphony.xwork2.interceptor.StaticParametersInterceptor.intercept(StaticParametersInterceptor.java:190)
 at
com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:249)
at
org.apache.struts2.interceptor.FileUploadInterceptor.intercept(FileUploadInterceptor.java:320)
 at
com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:249)
at
org.hisp.dhis.interceptor.ExceptionInterceptor.intercept(ExceptionInterceptor.java:100)
 at
com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:249)
at
org.apache.struts2.impl.StrutsActionProxy.execute(StrutsActionProxy.java:54)
 at
org.apache.struts2.dispatcher.Dispatcher.serviceAction(Dispatcher.java:510)
at
org.apache.struts2.dispatcher.FilterDispatcher.doFilter(FilterDispatcher.java:432)
 at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
 at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:322)
at
org.springframework.security.web.access.intercept.FilterSecurityInterceptor.invoke(FilterSecurityInterceptor.java:116)
 at
org.springframework.security.web.access.intercept.FilterSecurityInterceptor.doFilter(FilterSecurityInterceptor.java:83)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334)
 at
org.springframework.security.web.access.ExceptionTranslationFilter.doFilter(ExceptionTranslationFilter.java:113)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334)
 at
org.springframework.security.web.session.SessionManagementFilter.doFilter(SessionManagementFilter.java:103)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334)
 at
org.springframework.security.web.authentication.AnonymousAuthenticationFilter.doFilter(AnonymousAuthenticationFilter.java:113)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334)
 at
org.springframework.security.web.servletapi.SecurityContextHolderAwareRequestFilter.doFilter(SecurityContextHolderAwareRequestFilter.java:54)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334)
 at
org.springframework.security.web.savedrequest.RequestCacheAwareFilter.doFilter(RequestCacheAwareFilter.java:45)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334)
 at
org.springframework.security.web.authentication.www.BasicAuthenticationFilter.doFilter(BasicAuthenticationFilter.java:150)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334)
 at
org.springframework.security.web.authentication.AbstractAuthenticationProcessingFilter.doFilter(AbstractAuthenticationProcessingFilter.java:182)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334)
 at
org.hisp.dhis.security.filter.CustomAuthenticationFilter.doFilter(CustomAuthenticationFilter.java:54)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334)
 at
org.springframework.security.web.authentication.logout.LogoutFilter.doFilter(LogoutFilter.java:105)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334)
 at
org.hisp.dhis.security.filter.AutomaticAccessFilter.doFilter(AutomaticAccessFilter.java:112)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334)
 at
org.springframework.security.web.context.SecurityContextPersistenceFilter.doFilter(SecurityContextPersistenceFilter.java:87)
at
org.springframework.security.web.FilterChainProxy$VirtualFilterChain.doFilter(FilterChainProxy.java:334)
 at
org.springframework.security.web.FilterChainProxy.doFilterInternal(FilterChainProxy.java:184)
at
org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:155)
 at
org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:346)
at
org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:259)
 at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
 at
org.springframework.orm.hibernate4.support.OpenSessionInViewFilter.doFilterInternal(OpenSessionInViewFilter.java:119)
at
org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:76)
 at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
 at
org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:88)
at
org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:76)
 at
org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243)
at
org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210)
 at
org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:224)
at
org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:169)
 at
org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:472)
at
org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:168)
 at
org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:98)
at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:927)
 at
org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:118)
at
org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:407)
 at
org.apache.coyote.http11.AbstractHttp11Processor.process(AbstractHttp11Processor.java:987)
at
org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:579)
 at
org.apache.tomcat.util.net.JIoEndpoint$SocketProcessor.run(JIoEndpoint.java:309)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1110)
 at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603)
at java.lang.Thread.run(Thread.java:679)


On Mon, Apr 22, 2013 at 6:01 PM, Lars Helge Øverland <larshelge@xxxxxxxxx>wrote:

> Hi Marko,
>
> that log didn't say much.. There is likely another log file inside
> tomcat/logs that contains an exception of some kind...
>
> Lars
>
>
> On Mon, Apr 22, 2013 at 6:30 PM, Marko David Garcia <
> markodavidgm@xxxxxxxxx> wrote:
>
>> Hi,
>>
>> These are the log files.  Maybe the error is in the catalina.out at the
>> end
>> of file.
>>
>> Thank you very much.
>>
>>
>> 2013/4/22 Knut Staring <knutst@xxxxxxxxx>
>>
>> > Hi Marko,
>> > What does your log say?
>> >
>> > Sent from my mobile
>> > On Apr 22, 2013 4:44 PM, "Marko David Garcia" <markodavidgm@xxxxxxxxx>
>> > wrote:
>> >
>> >> Good morning.
>> >>
>> >> We are trying to import data in CSV format added, following the manual
>> >> steps in section 17.4.
>> >> We proposed using the same format. The DHIS version is 2.10.
>> >> When performing a get the message operation:
>> >> "An exception occurred
>> >>
>> >> Sorry! The system has failed to execute the operation. Normally no data
>> >> is lost and can continue to work going back. If you want to report the
>> >> incident may save this page by selecting "File -> Save (page as)" in
>> the
>> >> browser and include the page saved in the report. The detail of the
>> >> problem are given below. "
>> >>
>> >> Thanks for your cooperation.
>> >>
>> >> --
>> >> Cordialmente,
>> >>
>> >>
>> >> *Ing. Marko David Garcia M.
>> >> *
>> >> *Área de Sistemas integrados de Información
>>
>> >> Secretaría de Salud Departamental del Cauca
>> >>
>> >> *
>> >>
>> >> _______________________________________________
>> >> Mailing list: https://launchpad.net/~dhis2-users
>> >> Post to     : dhis2-users@xxxxxxxxxxxxxxxxxxx
>> >> Unsubscribe : https://launchpad.net/~dhis2-users
>> >> More help   : https://help.launchpad.net/ListHelp
>> >>
>> >>
>>
>>
>> --
>> Cordialmente,
>>
>>
>> *Ing. Marko David Garcia M.
>> *
>> *Área de Sistemas integrados de Información
>> Secretaría de Salud Departamental del Cauca
>>
>> *
>>
>> _______________________________________________
>> Mailing list: https://launchpad.net/~dhis2-users
>> Post to     : dhis2-users@xxxxxxxxxxxxxxxxxxx
>> Unsubscribe : https://launchpad.net/~dhis2-users
>> More help   : https://help.launchpad.net/ListHelp
>>
>>
>


-- 
Knut Staring
Dept. of Informatics, University of Oslo
+4791880522
http://dhis2.org

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