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Re: Problems with compiling DOLFIN on Redhat

To: Discussion of DOLFIN development <dolfin-dev@xxxxxxxxxx>
From: Anders Logg <logg@xxxxxxxxx>
Date: Sat, 8 Apr 2006 08:07:46 -0500
In-reply-to: <44378928.3020300@gmail.com>
Mail-followup-to: Discussion of DOLFIN development <dolfin-dev@xxxxxxxxxx>
Reply-to: Discussion of DOLFIN development <dolfin-dev@xxxxxxxxxx>
User-agent: Mutt/1.5.9i
This means that someone else has installed dolfin-config system-wide
on your machine (in /usr/local).

Since your local directory is first in your path, I would imagine your
system should choose the dolfin-config in that directory but it seems
to choose the one in /usr/local/bin instead.

You need to do one of the following:

1. Ask the person who installed in /usr/local/ to make sure that the
system-wide DOLFIN is correctly installed. Then you don't need to
install it locally yourself. Just do make demo (and forget about the
make, make install).

2. Ask the person who installed in /usr/local/ to uninstall.

3. Remove /usr/local/bin from your PATH.

4. Edit the Makefile for the demo you compile so it contains the full
path to dolfin-config.

etc etc...

This all comes down to one thing... You need to get along with the
other people that have DOLFIN installed in various places on your
system and I can't help you with that... :-)

/Anders


On Sat, Apr 08, 2006 at 02:58:00AM -0700, Alireza Forghani wrote:
>    [alireza@master dolfin-0.6.1]$ which dolfin-config
>    /usr/local/bin/dolfin-config
> 
>    Since I installed Dolfin on Local directory, It seems to be wrong and it
>    should be ran from:
> 
>  data/alireza/dolfin0.6.1/local/bin
> 
>  Alireza
> 
>    Garth N. Wells wrote:
> 
>  Try
>   ->which dolfin-config
> 
>  Garth
> 
>  On Sat, 2006-04-08 at 01:54 -0700, Alireza Forghani wrote:
> 
> 
>  Hi Anders,
> 
>  Thats right when I run dolfin-config --cflags from /src/config it returns:
> 
>  -I/data/alireza/dolfin-0.6.1/local/include -I../../src/kernel/common
>  -I../../src/kernel/fem -I../../src/kernel/form
>  -I../../src/kernel/function -I../../src/kernel/io -I../../src/kernel/la
>  -I../../src/kernel/main -I../../src/kernel/math -I../../src/kernel/mesh
>  -I../../src/kernel/nls -I../../src/kernel/ode -I../../src/kernel/pde
>  -I../../src/kernel/quadrature -I../../src/kernel/parameter
>  -I../../src/kernel/log -I/data/alireza/petsc-2.3.1-p11
>  -I/data/alireza/petsc-2.3.1-p11/bmake/linux-gnu-c-real-debug
>  -I/data/alireza/petsc-2.3.1-p11/include
>  -I/data/alireza/petsc-2.3.1-p11/externalpackages/mpich2-1.0.3/linux-gnu-c-real-debug/include
>  -I/usr/local/mpich/default/include -I/usr/include/libxml2
>  -I../../src/modules/elasticity -I../../src/modules/elasticity-updated
>  -I../../src/modules/convdiff -I../../src/modules/navierstokes
>  -I../../src/modules/poisson -I../../src/modules/stokes
>  -I../../src/modules/heat -I../../src/kernel/common
>  -I../../src/kernel/fem -I../../src/kernel/form
>  -I../../src/kernel/function -I../../src/kernel/io -I../../src/kernel/la
>  -I../../src/kernel/main -I../../src/kernel/math -I../../src/kernel/mesh
>  -I../../src/kernel/nls -I../../src/kernel/ode -I../../src/kernel/pde
>  -I../../src/kernel/quadrature -I../../src/kernel/parameter
>  -I../../src/kernel/log -I/data/alireza/petsc-2.3.1-p11
>  -I/data/alireza/petsc-2.3.1-p11/bmake/linux-gnu-c-real-debug
>  -I/data/alireza/petsc-2.3.1-p11/include
>  -I/data/alireza/petsc-2.3.1-p11/externalpackages/mpich2-1.0.3/linux-gnu-c-real-debug/include
>  -I/usr/local/mpich/default/include -I/usr/include/libxml2
>  -I../../src/modules/
> 
>  which is right and when I do from another folder:
> 
>  -I/usr/local/include -I../../src/kernel/common -I../../src/kernel/fem
>  -I../../src/kernel/form -I../../src/kernel/function
>  -I../../src/kernel/io -I../../src/kernel/la -I../../src/kernel/main
>  -I../../src/kernel/math -I../../src/kernel/mesh -I../../src/kernel/nls
>  -I../../src/kernel/ode -I../../src/kernel/pde
>  -I../../src/kernel/quadrature -I../../src/kernel/parameter
>  -I../../src/kernel/log -I/data/daan/FeNics/petsc-2.3.1-p2
>  -I/data/daan/FeNics/petsc-2.3.1-p2/bmake/linux-gnu-intel
>  -I/data/daan/FeNics/petsc-2.3.1-p2/include
>  -I/data/daan/FeNics/petsc-2.3.1-p2/include/mpiuni
>  -I/usr/local/mpich/default/include -I/usr/include/libxml2
>  -I../../src/modules/elasticity -I../../src/modules/elasticity-updated
>  -I../../src/modules/convdiff -I../../src/modules/navierstokes
>  -I../../src/modules/poisson -I../../src/modules/stokes
>  -I../../src/modules/heat -I../../src/kernel/common
>  -I../../src/kernel/fem -I../../src/kernel/form
>  -I../../src/kernel/function -I../../src/kernel/io -I../../src/kernel/la
>  -I../../src/kernel/main -I../../src/kernel/math -I../../src/kernel/mesh
>  -I../../src/kernel/nls -I../../src/kernel/ode -I../../src/kernel/pde
>  -I../../src/kernel/quadrature -I../../src/kernel/parameter
>  -I../../src/kernel/log -I/data/daan/FeNics/petsc-2.3.1-p2
>  -I/data/daan/FeNics/petsc-2.3.1-p2/bmake/linux-gnu-intel
>  -I/data/daan/FeNics/petsc-2.3.1-p2/include
>  -I/data/daan/FeNics/petsc-2.3.1-p2/include/mpiuni
>  -I/usr/local/mpich/default/include -I/usr/include/libxml2
>  -I../../src/modules/
> 
>  Which is daan!!
> 
>  echo $PATH returns:
> 
>  [alireza@master src]$ echo $PATH
>  data/alireza/dolfin0.6.1/local/bin:/opt/intel/intel_idb_80/bin:/opt/intel/intel_fc_80/bin:/opt/intel/intel_cc_80/bin:/usr/local/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/local/aspen/bin:/usr/local/mpich/default/bin:/usr/local/openpbs/bin:/opt/compro/bin:/data/alireza/bin
> 
>  dolfin-config is in the first directory:
>  data/alireza/dolfin0.6.1/local/bin
> 
> 
>  and when I did dolfin-config --cflags from /src/config from data/alireza/dolfin0.6.1/local/bin
>   it returns:
>  [alireza@master bin]$ ./dolfin-config --cflags
>  -I/data/alireza/dolfin-0.6.1/local/include -I../../src/kernel/common -I../../src/kernel/fem -I../../src/kernel/form -I../../src/kernel/function -I../../src/kernel/io -I../../src/kernel/la -I../../src/kernel/main -I../../src/kernel/math -I../../src/kernel/mesh -I../../src/kernel/nls -I../../src/kernel/ode -I../../src/kernel/pde -I../../src/kernel/quadrature -I../../src/kernel/parameter -I../../src/kernel/log -I/data/alireza/petsc-2.3.1-p11 -I/data/alireza/petsc-2.3.1-p11/bmake/linux-gnu-c-real-debug -I/data/alireza/petsc-2.3.1-p11/include -I/data/alireza/petsc-2.3.1-p11/externalpackages/mpich2-1.0.3/linux-gnu-c-real-debug/include -I/usr/local/mpich/default/include -I/usr/include/libxml2 -I../../src/modules/elasticity -I../../src/modules/elasticity-updated -I../../src/modules/convdiff -I../../src/modules/navierstokes -I../../src/modules/poisson -I../../src/modules/stokes -I../../src/modules/heat -I../../src/kernel/common -I../../src/kernel/fem -I../../src/kernel/form -I../../
> 
> 
>   s
> 
> 
>  rc/kernel/function -I../../src/kernel/io -I../../src/kernel/la -I../../src/kernel/main -I../../src/kernel/math -I../../src/kernel/mesh -I../../src/kernel/nls -I../../src/kernel/ode -I../../src/kernel/pde -I../../src/kernel/quadrature -I../../src/kernel/parameter -I../../src/kernel/log -I/data/alireza/petsc-2.3.1-p11 -I/data/alireza/petsc-2.3.1-p11/bmake/linux-gnu-c-real-debug -I/data/alireza/petsc-2.3.1-p11/include -I/data/alireza/petsc-2.3.1-p11/externalpackages/mpich2-1.0.3/linux-gnu-c-real-debug/include -I/usr/local/mpich/default/include -I/usr/include/libxml2 -I../../src/modules/
> 
>  which seems right
>  May be it is runs Daan's DOLFIN instead of mine!!!
> 
> 
>  Alireza
> 
> 
> 
> 
> 
> 
> 
>  Anders Logg wrote:
> 
>  That looks right. It says alireza and not daan.
> 
>  Then I would be *very* surprised if dolfin-config is not correct also.
> 
>  Check the dolfin-config (in the same directory). It should contain the
>  correct paths.
> 
>  Then runnin dolfin-config --cflags must also return the correct path.
>  Go to src/config and do
> 
>      ./dolfin-config --cflags
> 
>  I'd be very surprised if it doesn't return the correct path.
> 
>  Then go to another directory and do
> 
>      ./dolfin-config --cflags
> 
>  If that does not also return the correct path, then the dolfin-config
>  in your PATH must be the wrong dolfin-config.
> 
>  Maybe dolfin-config has been installed somewhere else in your PATH?
> 
>  Type
> 
>      echo $PATH
> 
>  then check if dolfin-config is in any of the directories.
> 
>  /Anders
> 
> 
> 
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> 
> 
> 
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> 
> 
> 
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> 
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-- 
Anders Logg
Research Assistant Professor
Toyota Technological Institute at Chicago
http://www.tti-c.org/logg/
Follow ups

Re: Problems with compiling DOLFIN on Redhat
From: Alireza Forghani, 2006-04-08
References

Re: Problems with compiling DOLFIN on Redhat
From: Alireza Forghani, 2006-04-08
Re: Problems with compiling DOLFIN on Redhat
From: Garth N. Wells, 2006-04-08
Re: Problems with compiling DOLFIN on Redhat
From: Alireza Forghani, 2006-04-08