dolfin team mailing list archive

[Dag Lindbo <dag@xxxxxxxxxx>]

johannr@xxxxxxxxx wrote:
> On Thu, March 27, 2008 Dag Lindbo wrote:
> > johannr@xxxxxxxxx wrote:
> > > On Wed, March 19, 2008 Dag Lindbo wrote:
> > > > Hello again,
> > > >
> > > > By default, NDEBUG should be defined (otherwise uBLAS becomes useless
> > > > even for very small problems). That is,
> > > >
> > > > # Default CXX and FORTRAN flags
> > > > env["CXXFLAGS"] = "-Wall -pipe -ansi -DNDEBUG"
> > > This is probably not the best place to add this flag. It is perhaps
> > > better
> > > to add it when enableOptimize=1 is given. For now, you can use the
> > > option
> > > customCxxFlags to add the -DNDEBUG flag, i.e.
> > >
> > >     scons customCxxFlags="-DNDEBUG"
> > Well, I still don't think it makes sense to relate -DNDEBUG with
> > enableOptimize. One should use enableDebugUblas if NDEBUG is _not_
> > wanted. In my SConstruct I have
> >
> > if not env["enableDebugUblas"]:
> >    env.Append(CXXFLAGS=" -DNDEBUG")
>
> Yes, I agree with you on that. Fixed it now.

Thanks!

> > > > Another concern: Did it find UMFPACK or not when it says:
> > > > Checking for numpy-1... yes
> > > > Checking for ufc-1... yes
> > > > Checking for umfpack... yes
> > > > Checking for python-2... yes
> > > > Checking for gts... yes
> > > > Checking for boost... yes
> > > > Checking for libxml-2.0... yes
> > > > Found optional package: gts
> > > > Unable to find optional package: petsc
> > > > Unable to find optional package: slepc
> > > > Unable to find optional package: scotch
> > > > Unable to find optional package: umfpack
> > > Well, it did find a pkg-config file for UMFPACK, however, it failed when
> > > resolving compiler or module dependencies. What does your umfpack.pc
> > > look
> > > like? Does it specify a compiler? That could probably be the issue here.
> > >
> > > > (I get some 'new' linking issues when building the demos: cannot find
> > > > libumfpack)
> > > Can you show us the contents of scons/simula_scons.log?
> > =================== dolfin log ===================
> > 2008-03-20 09:00:25.063925
> > Using simula_scons from:
> > /NOBACKUP/dag/fenics/tip/dolfin/scons/simula-scons/simula_scons/__init__.pyc
> > resolveCompiler: No pkg-config generator for package 'ufc-1'. Assuming Ok.
> > resolveCompiler: Some tests failed for package 'umfpack'. Discarding
> > package.
> > resolveCompiler: Unable to compile some UMFPACK tests, using
> > '/usr/include/umfpack' as location for UMFPACK includes.
> > Error message:
> > umfpack_config_test_include.cpp:3:21: error: umfpack.h: No such file or
> > directory
> > resolveCompiler: No pkg-config generator for package 'gts'. Assuming Ok.
> > resolveCompiler: No pkg-config generator for package 'libxml-2.0'.
> > Assuming Ok.
>
> Okay, it doesn't find the umfpack.h under /usr/include/umfpack. Do you now
> where it is located? Can you also show me the contents of the pkg-config
> file umfpack.pc?

$ cat /usr/local/lib/pkgconfig/umfpack.pc
Name: UMFPACK
Version: 4.6.0
Description: The UMFPACK project, a set of routines for solving sparse 
linear systems via LU factorization.
Libs: -L/usr/lib/atlas -llapack -L/usr/lib -lumfpack -L/usr/lib -lamd
Cflags: -I/usr/include/ufsparse -I/usr/include/ufsparse

/Dag