dolfin team mailing list archive

["Johannes Ring" <johannr@xxxxxxxxx>]

On Tue, April 1, 2008 Ilmar Wilbers wrote:
>
> Solveig Bruvoll wrote:
>> Johannes Ring wrote:
>>
>>> On Mon, March 31, 2008 Solveig Bruvoll wrote:
>>>
>>>
>>>> It seems to choose c++. The new output:
>>>>
>>>> [root@math-dhcp012 dolfin]# scons
>>>> scons: Reading SConscript files ...
>>>> Checking for numpy-1... yes
>>>> Checking for scotch... no (pkg-config file not found)
>>>> Trying to generate pkg-config file for scotch... failed
>>>> *** Unable to generate a suitable pkg-config file for scotch.
>>>> *** If scotch is present on your system, try setting the SCOTCH_DIR
>>>> *** environment variable to the directory where scotch is installed.
>>>> Checking for ufc-1... yes
>>>> Checking for umfpack... no (pkg-config file not found)
>>>> Trying to generate pkg-config file for umfpack... failed
>>>> *** Unable to generate a suitable pkg-config file for umfpack.
>>>> *** If umfpack is present on your system, try setting the UMFPACK_DIR
>>>> *** environment variable to the directory where umfpack is installed.
>>>> Checking for python-2... yes
>>>> Checking for petsc... no (pkg-config file not found)
>>>> Trying to generate pkg-config file for petsc... failed
>>>> *** Unable to generate a suitable pkg-config file for petsc.
>>>> *** If petsc is present on your system, try setting the PETSC_DIR
>>>> *** environment variable to the directory where petsc is installed.
>>>> Checking for gts... no (pkg-config file not found)
>>>> Trying to generate pkg-config file for gts... failed
>>>> *** Unable to generate a suitable pkg-config file for gts.
>>>> *** If gts is present on your system, try setting the GTS_DIR
>>>> *** environment variable to the directory where gts is installed.
>>>> Checking for boost... yes
>>>> Checking for slepc... no (pkg-config file not found)
>>>> Trying to generate pkg-config file for slepc... failed
>>>> *** Unable to generate a suitable pkg-config file for slepc.
>>>> *** If slepc is present on your system, try setting the SLEPC_DIR
>>>> *** environment variable to the directory where slepc is installed.
>>>> Checking for libxml-2.0... yes
>>>> Unable to find optional package: petsc
>>>> Unable to find optional package: slepc
>>>> Unable to find optional package: scotch
>>>> Unable to find optional package: umfpack
>>>> Unable to find optional package: gts
>>>> Enabling compilation of PyDOLFIN
>>>> scons: done reading SConscript files.
>>>> scons: Building targets ...
>>>> c++ -o dolfin/main/SubSystemsManager.os -c -Wall -pipe -ansi -DDEBUG
>>>> -g
>>>> -Werror -DNDEBUG -O2 -DHAS_MPI=1 -DMPICH_IGNORE_CXX_SEEK
>>>> -DPACKAGE_VERSION=\"0.7.2\" -fPIC -I. -I/usr/include/libxml2
>>>> dolfin/main/SubSystemsManager.cpp
>>>> dolfin/main/SubSystemsManager.cpp:18:17: error: mpi.h: No such file or
>>>> directory
>>>> dolfin/main/SubSystemsManager.cpp: In static member function ‘static
>>>> void dolfin::SubSystemsManager::initMPI()’:
>>>> dolfin/main/SubSystemsManager.cpp:54: error: ‘MPI_Init’ was not
>>>> declared
>>>> in this scope
>>>> dolfin/main/SubSystemsManager.cpp: In static member function ‘static
>>>> void dolfin::SubSystemsManager::finalizeMPI()’:
>>>> dolfin/main/SubSystemsManager.cpp:121: error: ‘MPI_Finalize’ was
>>>> not
>>>> declared in this scope
>>>> dolfin/main/SubSystemsManager.cpp: In static member function ‘static
>>>> bool dolfin::SubSystemsManager::MPIinitialized()’:
>>>> dolfin/main/SubSystemsManager.cpp:151: error: ‘MPI_Initialized’
>>>> was
>>>> not
>>>> declared in this scope
>>>> scons: *** [dolfin/main/SubSystemsManager.os] Error 1
>>>> scons: building terminated because of errors.
>>>>
>>>>
>>> Did another fix now. Please try again :)
>>>
>>> Johannes
>>>
>>>
>>>
>>>
>>
>> [root@math-dhcp012 dolfin]# scons
>> scons: Reading SConscript files ...
>> Checking for numpy-1... yes
>> Checking for scotch... no (pkg-config file not found)
>> Trying to generate pkg-config file for scotch... failed
>> *** Unable to generate a suitable pkg-config file for scotch.
>> *** If scotch is present on your system, try setting the SCOTCH_DIR
>> *** environment variable to the directory where scotch is installed.
>> Checking for ufc-1... yes
>> Checking for umfpack... no (pkg-config file not found)
>> Trying to generate pkg-config file for umfpack... failed
>> *** Unable to generate a suitable pkg-config file for umfpack.
>> *** If umfpack is present on your system, try setting the UMFPACK_DIR
>> *** environment variable to the directory where umfpack is installed.
>> Checking for python-2... yes
>> Checking for petsc... no (pkg-config file not found)
>> Trying to generate pkg-config file for petsc... failed
>> *** Unable to generate a suitable pkg-config file for petsc.
>> *** If petsc is present on your system, try setting the PETSC_DIR
>> *** environment variable to the directory where petsc is installed.
>> Checking for gts... no (pkg-config file not found)
>> Trying to generate pkg-config file for gts... failed
>> *** Unable to generate a suitable pkg-config file for gts.
>> *** If gts is present on your system, try setting the GTS_DIR
>> *** environment variable to the directory where gts is installed.
>> Checking for boost... yes
>> Checking for slepc... no (pkg-config file not found)
>> Trying to generate pkg-config file for slepc... failed
>> *** Unable to generate a suitable pkg-config file for slepc.
>> *** If slepc is present on your system, try setting the SLEPC_DIR
>> *** environment variable to the directory where slepc is installed.
>> Checking for libxml-2.0... yes
>> Unable to find optional package: petsc
>> Unable to find optional package: slepc
>> Unable to find optional package: scotch
>> Unable to find optional package: umfpack
>> Unable to find optional package: gts
>> Enabling compilation of PyDOLFIN
>> scons: done reading SConscript files.
>> scons: Building targets ...
>> c++ -o dolfin/main/SubSystemsManager.os -c -Wall -pipe -ansi -DDEBUG -g
>> -Werror -DNDEBUG -O2 -DHAS_MPI=1 -DMPICH_IGNORE_CXX_SEEK
>> -DPACKAGE_VERSION=\"0.7.2\" -fPIC -I. -I/usr/include/libxml2
>> dolfin/main/SubSystemsManager.cpp
>> dolfin/main/SubSystemsManager.cpp:18:17: error: mpi.h: No such file or
>> directory
>> dolfin/main/SubSystemsManager.cpp: In static member function 'static
>> void dolfin::SubSystemsManager::initMPI()':
>> dolfin/main/SubSystemsManager.cpp:54: error: 'MPI_Init' was not declared
>> in this scope
>> dolfin/main/SubSystemsManager.cpp: In static member function 'static
>> void dolfin::SubSystemsManager::finalizeMPI()':
>> dolfin/main/SubSystemsManager.cpp:121: error: 'MPI_Finalize' was not
>> declared in this scope
>> dolfin/main/SubSystemsManager.cpp: In static member function 'static
>> bool dolfin::SubSystemsManager::MPIinitialized()':
>> dolfin/main/SubSystemsManager.cpp:151: error: 'MPI_Initialized' was not
>> declared in this scope
>> scons: *** [dolfin/main/SubSystemsManager.os] Error 1
>> scons: building terminated because of errors.
>>
>>
>> Seems unchanged to me.
>>
>> Solveig
>>
>> _______________________________________________
>> DOLFIN-dev mailing list
>> DOLFIN-dev@xxxxxxxxxx
>> http://www.fenics.org/mailman/listinfo/dolfin-dev
>>
> I think
>   if not env.Detect("mpirun") and env["CXX"] not in mpi_cxx_compilers:
> should be
>   if not env.Detect("mpirun") or env["CXX"] not in mpi_cxx_compilers:
> in SConstruct?

Fixed now!

Johannes

> I know I said it looked OK :-)
>
> ilmar
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