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Message #15691
[Bug 424251] Re: Inline algebraic operators on vectors unsafe in pydolfin
** Changed in: dolfin
Status: Fix Committed => Fix Released
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Inline algebraic operators on vectors unsafe in pydolfin
https://bugs.launchpad.net/bugs/424251
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Status in DOLFIN: Fix Released
Bug description:
>From Bugzilla:
Given
v = Vector()
u = Vector()
... initialize v, u
The operations
v *= -1.0
v -+= u
are unsafe, causing possible memory corruption. This seems to be because swig
creates new python objects for the vectors, causing deletion the C++ object if
the original reference count goes to zero.
Temporary workaround:
tmp = numpy.zeros(v.size())
v.get(tmp)
v.set(3.0*tmp)
is mathematically equivalent with
v *= 3.0
and
tmp1 = numpy.zeros(v.size())
tmp2 = numpy.zeros(v.size())
u.get(tmp1)
v.get(tmp2)
v.set(tmp1+tmp2)
is mathematically equivalent with
v += u
------- Comment #1 From Martin Alnæs 2008-06-25 12:43:24 [reply] -------
Reproduction of the bug is easy:
In [1]: from dolfin import *
v
In [2]: v = Vector()
uBlasVector constructor
Vector constructor
In [3]: u = Vector()
uBlasVector constructor
Vector constructor
In [4]: v.init(3)
In [5]: u.init(3)
In [6]: w = v
In [7]: v += u
In [8]: del v
uBlasVector destructor
Vector destructor
In [9]: w.size()
Segmentation fault (core dumped)
------- Comment #2 From Martin Alnæs 2008-06-25 12:45:02 [reply] -------
Temporary workarounds:
def imul(a, b):
v = numpy.zeros(a.size())
a.get(v)
a.set(b*v)
def iadd(a, b):
v = numpy.zeros(a.size())
w = numpy.zeros(a.size())
a.get(v)
b.get(w)
a.set(v+w)
References