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Re: [Bug 597524] [NEW] Error when I run dolfin examples

 

Looks like there might be something wrong with your C++ compiler.

Have you installed a C++ compiler?

What platform are you on?

Can you run other python demos?

Johan

On Tuesday June 22 2010 20:43:31 Eugeny A. Rostovtsev wrote:
> Public bug reported:
> 
> Command:
> $ python
> /usr/share/dolfin/examples/adaptivity/adaptive-poisson/python/demo.py
> 
> Traceback:
> Calling FFC just-in-time (JIT) compiler, this may take some time.
> In instant.recompile: The module did not compile, see
> '/tmp/.private/real/tmpDTaz9F2010-6-23-03-32_instant/form_24ff983a5ff5adb5
> 327347034b995a505d6295c7/compile.log' Traceback (most recent call last):
>   File
> "/usr/share/dolfin/examples/adaptivity/adaptive-poisson/python/demo.py",
> line 46, in <module> V = FunctionSpace(mesh, "CG", 1)
>   File "/usr/lib/petsc-real/python/dolfin/function/functionspace.py", line
> 230, in __init__ FunctionSpaceBase.__init__(self, mesh, element)
>   File "/usr/lib/petsc-real/python/dolfin/function/functionspace.py", line
> 44, in __init__ ufc_element, ufc_dofmap = jit(self._ufl_element)
>   File "/usr/lib/petsc-real/python/dolfin/compilemodules/jit.py", line 44,
> in mpi_jit return local_jit(*args, **kwargs)
>   File "/usr/lib/petsc-real/python/dolfin/compilemodules/jit.py", line 103,
> in jit return jit_compile(form, parameters=p, common_cell=common_cell)
> File "/usr/lib/python2.6/site-packages/ffc/jitcompiler.py", line 56, in
> jit return jit_element(object, parameters)
>   File "/usr/lib/python2.6/site-packages/ffc/jitcompiler.py", line 135, in
> jit_element (compiled_form, module, form_data) = jit_form(form,
> parameters) File "/usr/lib/python2.6/site-packages/ffc/jitcompiler.py",
> line 107, in jit_form cache_dir = cache_dir)
>   File "/usr/lib64/python2.6/site-packages/ufc_utils/build.py", line 63, in
> build_ufc_module **kwargs)
>   File "/usr/lib/python2.6/site-packages/instant/build.py", line 474, in
> build_module recompile(modulename, module_path, setup_name,
> new_compilation_checksum) File
> "/usr/lib/python2.6/site-packages/instant/build.py", line 100, in
> recompile "compile, see '%s'" % compile_log_filename)
>   File "/usr/lib/python2.6/site-packages/instant/output.py", line 49, in
> instant_error raise RuntimeError(text)
> RuntimeError: In instant.recompile: The module did not compile, see
> '/tmp/.private/real/tmpDTaz9F2010-6-23-03-32_instant/form_24ff983a5ff5adb5
> 327347034b995a505d6295c7/compile.log'
> 
> /tmp/.private/real/tmpDTaz9F2010-6-23-03-32_instant/form_24ff983a5ff5adb532
> 7347034b995a505d6295c7/compile.log: running build_ext
> building '_form_24ff983a5ff5adb5327347034b995a505d6295c7' extension
> creating build
> creating build/temp.linux-x86_64-2.6
> x86_64-alt-linux-gcc -pthread -fno-strict-aliasing -DNDEBUG -pipe -Wall -O2
> -fPIC -DPIC -D_GNU_SOURCE -fPIC -I/usr/include -I/usr/include
> -I/usr/include/python2.6 -c
> form_24ff983a5ff5adb5327347034b995a505d6295c7_wrap.cxx -o
> build/temp.linux-x86_64-2.6/form_24ff983a5ff5adb5327347034b995a505d6295c7_
> wrap.o -O0 x86_64-alt-linux-gcc: error trying to exec 'cc1plus': execvp: No
> such file or directory error: command 'x86_64-alt-linux-gcc' failed with
> exit status 1
> 
> Info:
> dolfin: 0.9.7 (bzr 2010/06/15)
> ffc: 0.9.2 (bzr 2010/06/15)
> instant: 0.9.8 (bzr 2010/02/15)
> 
> ** Affects: dolfin
>      Importance: Undecided
>          Status: New

-- 
Error when I run dolfin examples
https://bugs.launchpad.net/bugs/597524
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Team, which is subscribed to DOLFIN.

Status in DOLFIN: New

Bug description:
Command:
$ python /usr/share/dolfin/examples/adaptivity/adaptive-poisson/python/demo.py

Traceback:
Calling FFC just-in-time (JIT) compiler, this may take some time.
In instant.recompile: The module did not compile, see '/tmp/.private/real/tmpDTaz9F2010-6-23-03-32_instant/form_24ff983a5ff5adb5327347034b995a505d6295c7/compile.log'
Traceback (most recent call last):
  File "/usr/share/dolfin/examples/adaptivity/adaptive-poisson/python/demo.py", line 46, in <module>
    V = FunctionSpace(mesh, "CG", 1)
  File "/usr/lib/petsc-real/python/dolfin/function/functionspace.py", line 230, in __init__
    FunctionSpaceBase.__init__(self, mesh, element)
  File "/usr/lib/petsc-real/python/dolfin/function/functionspace.py", line 44, in __init__
    ufc_element, ufc_dofmap = jit(self._ufl_element)
  File "/usr/lib/petsc-real/python/dolfin/compilemodules/jit.py", line 44, in mpi_jit
    return local_jit(*args, **kwargs)
  File "/usr/lib/petsc-real/python/dolfin/compilemodules/jit.py", line 103, in jit
    return jit_compile(form, parameters=p, common_cell=common_cell)
  File "/usr/lib/python2.6/site-packages/ffc/jitcompiler.py", line 56, in jit
    return jit_element(object, parameters)
  File "/usr/lib/python2.6/site-packages/ffc/jitcompiler.py", line 135, in jit_element
    (compiled_form, module, form_data) = jit_form(form, parameters)
  File "/usr/lib/python2.6/site-packages/ffc/jitcompiler.py", line 107, in jit_form
    cache_dir = cache_dir)
  File "/usr/lib64/python2.6/site-packages/ufc_utils/build.py", line 63, in build_ufc_module
    **kwargs)
  File "/usr/lib/python2.6/site-packages/instant/build.py", line 474, in build_module
    recompile(modulename, module_path, setup_name, new_compilation_checksum)
  File "/usr/lib/python2.6/site-packages/instant/build.py", line 100, in recompile
    "compile, see '%s'" % compile_log_filename)
  File "/usr/lib/python2.6/site-packages/instant/output.py", line 49, in instant_error
    raise RuntimeError(text)
RuntimeError: In instant.recompile: The module did not compile, see '/tmp/.private/real/tmpDTaz9F2010-6-23-03-32_instant/form_24ff983a5ff5adb5327347034b995a505d6295c7/compile.log'

/tmp/.private/real/tmpDTaz9F2010-6-23-03-32_instant/form_24ff983a5ff5adb5327347034b995a505d6295c7/compile.log:
running build_ext                                                                                 
building '_form_24ff983a5ff5adb5327347034b995a505d6295c7' extension                               
creating build                                                                                    
creating build/temp.linux-x86_64-2.6                                                              
x86_64-alt-linux-gcc -pthread -fno-strict-aliasing -DNDEBUG -pipe -Wall -O2 -fPIC -DPIC -D_GNU_SOURCE -fPIC -I/usr/include -I/usr/include -I/usr/include/python2.6 -c form_24ff983a5ff5adb5327347034b995a505d6295c7_wrap.cxx -o build/temp.linux-x86_64-2.6/form_24ff983a5ff5adb5327347034b995a505d6295c7_wrap.o -O0
x86_64-alt-linux-gcc: error trying to exec 'cc1plus': execvp: No such file or directory           
error: command 'x86_64-alt-linux-gcc' failed with exit status 1

Info:
dolfin: 0.9.7 (bzr 2010/06/15)
ffc: 0.9.2 (bzr 2010/06/15)
instant: 0.9.8 (bzr 2010/02/15)





References