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[mrk <cvs-src@xxxxxxxxx>]

btw, i can't confirm that here on FreeBSD with 0.2.3. 
I've activate all the plugins (apart from Bugzilla and Geolocalized tasks, because FreeBSD ports repository didn't has required dependencies), then restart GTG and all the plugins appeared on panel and in Plugins menu. 
So this seems some ubuntu-specific thingie. 
Is there any errors when you start gtg from terminal and trying to activate the plugins?

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plugin selections are not remembered on closing of app
https://bugs.launchpad.net/bugs/533157
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Status in Getting Things GNOME!: New

Bug description:
using version 0.2.3 on Ubuntu 9.10 amd64

After every start of gtg I have to set all the plugins I want to use, as the selection seems not to be saved on closing of the application.

The plugins I use are:
- Notification area
- Evolution
- Hamster Time Tracker Integration