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Automated crash report for /tmp/yade-26182/bin/yade-svn1368: SDECLinkedSpheres, ScrewGen, TetraTestGen, ThreePointBending

To: yade-dev@xxxxxxxxxxxxxxxx
From: eudoxos@xxxxxxxx
Date: Sun, 25 May 2008 15:28:52 +0200 (CEST)
Delivered-to: janek_listy@xxxxx (janek_listy)
Delivered-to: yade-dev@xxxxxxxxxxxxxxxx
Reply-to: yade-dev@xxxxxxxxxxxxxxxx
Sender: yade-dev-bounces@xxxxxxxxxxxxxxxx
################################################################################
SDECLinkedSpheres: simulation CRASH
################################################################################
Constructing ClassFactory  (if multiple times - check '-rdynamic' flag!).
Constructing SerializableSingleton  (if multiple times - check '-rdynamic' flag!).
WARNING: cannot open file used for capillary law, in TriaxalTestWater
yade-svn1368: /usr/include/boost/shared_ptr.hpp:253: T* boost::shared_ptr<T>::operator->() const [with T = SpheresContactGeometry]: Assertion `px != 0' failed.
Running script /tmp/yade-test-28814.py
SIGSEGV/SIGABRT handler called; gdb batch file is `/home/profesori/eudoxos/.yade-svn1368/gdb_crash_batch-pid28873'
GNU gdb 6.6-debian
Copyright (C) 2006 Free Software Foundation, Inc.
GDB is free software, covered by the GNU General Public License, and you are
welcome to change it and/or distribute copies of it under certain conditions.
Type "show copying" to see the conditions.
There is absolutely no warranty for GDB.  Type "show warranty" for details.
This GDB was configured as "x86_64-linux-gnu".
Using host libthread_db library "/lib/libthread_db.so.1".
[Thread debugging using libthread_db enabled]
[New Thread 47449815311040 (LWP 28873)]
[New Thread 1082132800 (LWP 28874)]
0x00000030010961d1 in nanosleep () from /lib/libc.so.6
No symbol "info" in current context.

Thread 2 (Thread 1082132800 (LWP 28874)):
#0  0x0000003001095b2f in waitpid () from /lib/libc.so.6
#1  0x000000300103c763 in ?? () from /lib/libc.so.6
#2  0x000000300103cad7 in system () from /lib/libc.so.6
#3  0x00000000005705c3 in sigHandler (sig=6) at core/yade.cpp:58
#4  <signal handler called>
#5  0x0000003001030cab in raise () from /lib/libc.so.6
#6  0x0000003001032660 in abort () from /lib/libc.so.6
#7  0x000000300102a436 in __assert_fail () from /lib/libc.so.6
#8  0x00002b27cbb90b5b in boost::shared_ptr<SpheresContactGeometry>::operator-> (this=0x407ffca0) at /usr/include/boost/shared_ptr.hpp:253
#9  0x00002b27cbdbedd0 in InteractingSphere2InteractingSphere4SpheresContactGeometry::go (this=0xa574e0, cm1=@0xa5cfd8, cm2=@0xa5bf18, se31=@0xa5d920, se32=@0xa5dca0, c=@0x407ffdd0) at pkg/dem/Engine/EngineUnit/InteractingSphere2InteractingSphere4SpheresContactGeometry.cpp:69
#10 0x00002b27c953e765 in DynLibDispatcher<Loki::Typelist<InteractingGeometry, Loki::Typelist<InteractingGeometry, Loki::NullType> >, InteractionGeometryEngineUnit, bool, Loki::Typelist<boost::shared_ptr<InteractingGeometry> const&, Loki::Typelist<boost::shared_ptr<InteractingGeometry> const&, Loki::Typelist<Se3<double> const&, Loki::Typelist<Se3<double> const&, Loki::Typelist<boost::shared_ptr<Interaction> const&, Loki::NullType> > > > >, false>::operator() (this=0xa56c20, base1=@0xa5cfd8, base2=@0xa5bf18, p3=@0xa5d920, p4=@0xa5dca0, p5=@0x407ffdd0) at /tmp/yade-26182/build-svn1368/include/yade-svn1368/yade/lib-multimethods/DynLibDispatcher.hpp:882
#11 0x00002b27c953388b in InteractionGeometryMetaEngine::action (this=0xa56be0, ncb=0xa54660) at pkg/common/Engine/MetaEngine/InteractionGeometryMetaEngine.cpp:31
#12 0x0000000000516a47 in MetaBody::moveToNextTimeStep (this=0xa54660) at core/MetaBody.cpp:81
#13 0x0000000000567411 in SimulationFlow::singleAction (this=0x806680) at core/SimulationFlow.cpp:17
#14 0x00000000005691dc in ThreadWorker::callSingleAction (this=0x806680) at core/ThreadWorker.cpp:71
#15 0x0000000000568909 in ThreadRunner::call (this=0xa4e660) at core/ThreadRunner.cpp:42
#16 0x000000000056896d in ThreadRunner::run (this=0xa4e660) at core/ThreadRunner.cpp:21
#17 0x0000000000568d79 in boost::_mfi::mf0<void, ThreadRunner>::operator() (this=0xa3af30, p=0xa4e660) at /usr/include/boost/bind/mem_fn_template.hpp:45
#18 0x0000000000568dfa in boost::_bi::list1<boost::_bi::value<ThreadRunner*> >::operator()<boost::_mfi::mf0<void, ThreadRunner>, boost::_bi::list0> (this=0xa3af40, f=@0xa3af30, a=@0x4080004f) at /usr/include/boost/bind.hpp:230
#19 0x0000000000568e3d in boost::_bi::bind_t<void, boost::_mfi::mf0<void, ThreadRunner>, boost::_bi::list1<boost::_bi::value<ThreadRunner*> > >::operator() (this=0xa3af30) at /usr/include/boost/bind/bind_template.hpp:20
#20 0x0000000000568e62 in boost::detail::function::void_function_obj_invoker0<boost::_bi::bind_t<void, boost::_mfi::mf0<void, ThreadRunner>, boost::_bi::list1<boost::_bi::value<ThreadRunner*> > >, void>::invoke (function_obj_ptr={obj_ptr = 0xa3af30, const_obj_ptr = 0xa3af30, func_ptr = 0xa3af30, data = "0"}) at /usr/include/boost/function/function_template.hpp:136
#21 0x00002b27c215b8cf in boost::function0<void, std::allocator<boost::function_base> >::operator() () from /usr/lib/libboost_thread-gcc-mt-1_33_1.so.1.33.1
#22 0x00002b27c215b2ef in ?? () from /usr/lib/libboost_thread-gcc-mt-1_33_1.so.1.33.1
#23 0x00000030024062a5 in start_thread () from /lib/libpthread.so.0
#24 0x00000030010cf61d in clone () from /lib/libc.so.6
#25 0x0000000000000000 in ?? ()

Thread 1 (Thread 47449815311040 (LWP 28873)):
#0  0x00000030010961d1 in nanosleep () from /lib/libc.so.6
#1  0x00000030010c9134 in usleep () from /lib/libc.so.6
#2  0x00002b27e81034ee in pyOmega::wait (this=0xa3af20) at gui/py/yadeControl.cpp:386
#3  0x00002b27e8042c77 in boost::python::detail::invoke<int, void (pyOmega::*)(), boost::python::arg_from_python<pyOmega&> > (f=@0xa26d58, tc=@0x7fffe903fb00) at /usr/include/boost/python/detail/invoke.hpp:94
#4  0x00002b27e8099e9c in boost::python::detail::caller_arity<1u>::impl<void (pyOmega::*)(), boost::python::default_call_policies, boost::mpl::vector2<void, pyOmega&> >::operator() (this=0xa26d58, args_=0x2b27c582dad0) at /usr/include/boost/python/detail/caller.hpp:199
#5  0x00002b27e8099ef5 in boost::python::objects::caller_py_function_impl<boost::python::detail::caller<void (pyOmega::*)(), boost::python::default_call_policies, boost::mpl::vector2<void, pyOmega&> > >::operator() (this=0xa26d50, args=0x2b27c582dad0, kw=0x0) at /usr/include/boost/python/object/py_function.hpp:38
#6  0x00002b27c36ed89d in boost::python::objects::function::call () from /usr/lib/libboost_python-gcc-mt-1_33_1.so.1.33.1
#7  0x00002b27c36ee825 in boost::detail::function::void_function_obj_invoker0<boost::python::objects::(anonymous namespace)::bind_return, void>::invoke () from /usr/lib/libboost_python-gcc-mt-1_33_1.so.1.33.1
#8  0x00002b27c215b8cf in boost::function0<void, std::allocator<boost::function_base> >::operator() () from /usr/lib/libboost_thread-gcc-mt-1_33_1.so.1.33.1
#9  0x00002b27c36f38f8 in boost::python::handle_exception_impl () from /usr/lib/libboost_python-gcc-mt-1_33_1.so.1.33.1
#10 0x00002b27c36eddb7 in boost::python::handle_exception<boost::python::objects::(anonymous namespace)::bind_return> () from /usr/lib/libboost_python-gcc-mt-1_33_1.so.1.33.1
#11 0x00002b27c36eac9e in ?? () from /usr/lib/libboost_python-gcc-mt-1_33_1.so.1.33.1
#12 0x00002b27c1acb033 in PyObject_Call () from /usr/lib/libpython2.5.so.1.0
#13 0x00002b27c1b46919 in PyEval_EvalFrameEx () from /usr/lib/libpython2.5.so.1.0
#14 0x00002b27c1b4c6c6 in PyEval_EvalCodeEx () from /usr/lib/libpython2.5.so.1.0
#15 0x00002b27c1b4c702 in PyEval_EvalCode () from /usr/lib/libpython2.5.so.1.0
#16 0x00002b27c1b6f561 in PyRun_FileExFlags () from /usr/lib/libpython2.5.so.1.0
#17 0x00002b27c1b438a4 in ?? () from /usr/lib/libpython2.5.so.1.0
#18 0x00002b27c1b4b8d5 in PyEval_EvalFrameEx () from /usr/lib/libpython2.5.so.1.0
#19 0x00002b27c1b4c6c6 in PyEval_EvalCodeEx () from /usr/lib/libpython2.5.so.1.0
#20 0x00002b27c1b4c702 in PyEval_EvalCode () from /usr/lib/libpython2.5.so.1.0
#21 0x00002b27c1b6f561 in PyRun_FileExFlags () from /usr/lib/libpython2.5.so.1.0
#22 0x00002b27c1b6f7e8 in PyRun_SimpleFileExFlags () from /usr/lib/libpython2.5.so.1.0
#23 0x00002b27cf464c1b in PythonUI::execScript (script=@0x7fffe9040c10) at gui/py/PythonUI.cpp:42
#24 0x00002b27cf465ae2 in PythonUI::pythonSession () at gui/py/PythonUI.cpp:92
#25 0x00002b27cf4662e2 in PythonUI::run (this=0xa298e0, argc=3, argv=0x7fffe90417d0) at gui/py/PythonUI.cpp:121
#26 0x0000000000570061 in main (argc=3, argv=0x7fffe90417d0) at core/yade.cpp:255
#0  0x00000030010961d1 in nanosleep () from /lib/libc.so.6

################################################################################
ScrewGen: generator CRASH
################################################################################
Constructing ClassFactory  (if multiple times - check '-rdynamic' flag!).
Constructing SerializableSingleton  (if multiple times - check '-rdynamic' flag!).
WARNING: cannot open file used for capillary law, in TriaxalTestWater
yade-svn1368: /tmp/yade-26182/build-svn1368/include/yade-svn1368/yade/lib-multimethods/DynLibDispatcher.hpp:447: bool DynLibDispatcher<BaseClass, Executor, ResultType, TList, autoSymmetry>::locateMultivirtualFunctor2D(int&, int&, boost::shared_ptr<typename Loki::TL::TypeAtNonStrict<typename Loki::TL::Append<Loki::NullType, T>::Result, 0u, Loki::NullType>::Result>&, boost::shared_ptr<typename Loki::TL::TypeAtNonStrict<typename Loki::TL::Append<Loki::NullType, T>::Result, 1u, Loki::NullType>::Result>&) [with BaseClass = Loki::Typelist<InteractingGeometry, Loki::Typelist<BoundingVolume, Loki::NullType> >, Executor = BoundingVolumeEngineUnit, ResultType = void, TList = Loki::Typelist<const boost::shared_ptr<InteractingGeometry>&, Loki::Typelist<boost::shared_ptr<BoundingVolume>&, Loki::Typelist<const Se3r&, Loki::Typelist<const Body*, Loki::NullType> > > >, bool autoSymmetry = true]: Assertion `index1 >= 0 && (unsigned int)( index1 ) < callBacks.size() && index2 >= 0 && (unsigned
  int)( index2 ) < callBacks[index1].size()' failed.
Running script /tmp/yade-test-28814.py
SIGSEGV/SIGABRT handler called; gdb batch file is `/home/profesori/eudoxos/.yade-svn1368/gdb_crash_batch-pid28896'
GNU gdb 6.6-debian
Copyright (C) 2006 Free Software Foundation, Inc.
GDB is free software, covered by the GNU General Public License, and you are
welcome to change it and/or distribute copies of it under certain conditions.
Type "show copying" to see the conditions.
There is absolutely no warranty for GDB.  Type "show warranty" for details.
This GDB was configured as "x86_64-linux-gnu".
Using host libthread_db library "/lib/libthread_db.so.1".
[Thread debugging using libthread_db enabled]
[New Thread 47510991356608 (LWP 28896)]
0x0000003001095af5 in waitpid () from /lib/libc.so.6
No symbol "info" in current context.

Thread 1 (Thread 47510991356608 (LWP 28896)):
#0  0x0000003001095af5 in waitpid () from /lib/libc.so.6
#1  0x000000300103c763 in ?? () from /lib/libc.so.6
#2  0x00000000005705c3 in sigHandler (sig=6) at core/yade.cpp:58
#3  <signal handler called>
#4  0x0000003001030cab in raise () from /lib/libc.so.6
#5  0x0000003001032660 in abort () from /lib/libc.so.6
#6  0x000000300102a436 in __assert_fail () from /lib/libc.so.6
#7  0x00002b36084a35e1 in DynLibDispatcher<Loki::Typelist<InteractingGeometry, Loki::Typelist<BoundingVolume, Loki::NullType> >, BoundingVolumeEngineUnit, void, Loki::Typelist<boost::shared_ptr<InteractingGeometry> const&, Loki::Typelist<boost::shared_ptr<BoundingVolume>&, Loki::Typelist<Se3<double> const&, Loki::Typelist<Body const*, Loki::NullType> > > >, true>::locateMultivirtualFunctor2D (this=0xa4f840, index1=@0x7fffaaa3783c, index2=@0x7fffaaa37838, base1=@0xa59208, base2=@0xa59218) at /tmp/yade-26182/build-svn1368/include/yade-svn1368/yade/lib-multimethods/DynLibDispatcher.hpp:446
#8  0x00002b36084a395b in DynLibDispatcher<Loki::Typelist<InteractingGeometry, Loki::Typelist<BoundingVolume, Loki::NullType> >, BoundingVolumeEngineUnit, void, Loki::Typelist<boost::shared_ptr<InteractingGeometry> const&, Loki::Typelist<boost::shared_ptr<BoundingVolume>&, Loki::Typelist<Se3<double> const&, Loki::Typelist<Body const*, Loki::NullType> > > >, true>::operator() (this=0xa4f840, base1=@0xa59208, base2=@0xa59218, p3=@0xa59260, p4=0xa591c0) at /tmp/yade-26182/build-svn1368/include/yade-svn1368/yade/lib-multimethods/DynLibDispatcher.hpp:856
#9  0x00002b3608498e25 in BoundingVolumeMetaEngine::action (this=0xa4f800, ncb=0xa4f4c0) at pkg/common/Engine/MetaEngine/BoundingVolumeMetaEngine.cpp:27
#10 0x0000000000516b85 in MetaBody::runInitializers (this=0xa4f4c0) at core/MetaBody.cpp:43
#11 0x0000000000516c44 in MetaBody::postProcessAttributes (this=0xa4f4c0, deserializing=false) at core/MetaBody.cpp:49
#12 0x00002b3602372154 in Serializable::unregisterSerializableAttributes (this=0xa4f4c0, deserializing=false) at lib/serialization/Serializable.cpp:29
#13 0x00002b3603e4c8a5 in XMLFormatManager::serializeSerializable (stream=@0x7fffaaa37bd0, ac=@0xaac080, depth=1) at lib/serialization-xml/XMLFormatManager.cpp:168
#14 0x00002b3603e4b258 in XMLFormatManager::serializeSmartPointer (stream=@0x7fffaaa37bd0, ac=@0xaabff0, depth=1) at lib/serialization-xml/XMLFormatManager.cpp:284
#15 0x0000000000505c62 in IOFormatManager::saveToFile<boost::shared_ptr<MetaBody> > (libName=@0xa4e580, fileName=@0xa4e578, name=@0x7fffaaa380e0, t=@0xa4e568) at /tmp/yade-26182/build-svn1368/include/yade-svn1368/yade/lib-serialization/IOFormatManager.tpp:59
#16 0x00000000004f161f in FileGenerator::generateAndSave (this=0xa4e500) at core/FileGenerator.cpp:89
#17 0x00002b3626704110 in pyFileGenerator::generate (this=0xa4e6a0, outFile=@0x7fffaaa38440) at gui/py/yadeControl.cpp:263
#18 0x00002b36266e69f7 in boost::python::detail::invoke<boost::python::to_python_value<bool const&>, bool (pyFileGenerator::*)(std::string), boost::python::arg_from_python<pyFileGenerator&>, boost::python::arg_from_python<std::string> > (rc=@0x7fffaaa384de, f=@0xa49438, tc=@0x7fffaaa384c0, ac0=@0x7fffaaa384e0) at /usr/include/boost/python/detail/invoke.hpp:88
#19 0x00002b36266e6b5a in boost::python::detail::caller_arity<2u>::impl<bool (pyFileGenerator::*)(std::string), boost::python::default_call_policies, boost::mpl::vector3<bool, pyFileGenerator&, std::string> >::operator() (this=0xa49438, args_=0x2b3603e23ea8) at /usr/include/boost/python/detail/caller.hpp:199
#20 0x00002b36266e6c05 in boost::python::objects::caller_py_function_impl<boost::python::detail::caller<bool (pyFileGenerator::*)(std::string), boost::python::default_call_policies, boost::mpl::vector3<bool, pyFileGenerator&, std::string> > >::operator() (this=0xa49430, args=0x2b3603e23ea8, kw=0x0) at /usr/include/boost/python/object/py_function.hpp:38
#21 0x00002b3601cf389d in boost::python::objects::function::call () from /usr/lib/libboost_python-gcc-mt-1_33_1.so.1.33.1
#22 0x00002b3601cf4825 in boost::detail::function::void_function_obj_invoker0<boost::python::objects::(anonymous namespace)::bind_return, void>::invoke () from /usr/lib/libboost_python-gcc-mt-1_33_1.so.1.33.1
#23 0x00002b36007618cf in boost::function0<void, std::allocator<boost::function_base> >::operator() () from /usr/lib/libboost_thread-gcc-mt-1_33_1.so.1.33.1
#24 0x00002b3601cf98f8 in boost::python::handle_exception_impl () from /usr/lib/libboost_python-gcc-mt-1_33_1.so.1.33.1
#25 0x00002b3601cf3db7 in boost::python::handle_exception<boost::python::objects::(anonymous namespace)::bind_return> () from /usr/lib/libboost_python-gcc-mt-1_33_1.so.1.33.1
#26 0x00002b3601cf0c9e in ?? () from /usr/lib/libboost_python-gcc-mt-1_33_1.so.1.33.1
#27 0x00002b36000d1033 in PyObject_Call () from /usr/lib/libpython2.5.so.1.0
#28 0x00002b360014c919 in PyEval_EvalFrameEx () from /usr/lib/libpython2.5.so.1.0
#29 0x00002b36001526c6 in PyEval_EvalCodeEx () from /usr/lib/libpython2.5.so.1.0
#30 0x00002b3600152702 in PyEval_EvalCode () from /usr/lib/libpython2.5.so.1.0
#31 0x00002b3600175561 in PyRun_FileExFlags () from /usr/lib/libpython2.5.so.1.0
#32 0x00002b36001498a4 in ?? () from /usr/lib/libpython2.5.so.1.0
#33 0x00002b36001518d5 in PyEval_EvalFrameEx () from /usr/lib/libpython2.5.so.1.0
#34 0x00002b36001526c6 in PyEval_EvalCodeEx () from /usr/lib/libpython2.5.so.1.0
#35 0x00002b3600152702 in PyEval_EvalCode () from /usr/lib/libpython2.5.so.1.0
#36 0x00002b3600175561 in PyRun_FileExFlags () from /usr/lib/libpython2.5.so.1.0
#37 0x00002b36001757e8 in PyRun_SimpleFileExFlags () from /usr/lib/libpython2.5.so.1.0
#38 0x00002b360da6ac1b in PythonUI::execScript (script=@0x7fffaaa39600) at gui/py/PythonUI.cpp:42
#39 0x00002b360da6bae2 in PythonUI::pythonSession () at gui/py/PythonUI.cpp:92
#40 0x00002b360da6c2e2 in PythonUI::run (this=0xa298e0, argc=3, argv=0x7fffaaa3a1c0) at gui/py/PythonUI.cpp:121
#41 0x0000000000570061 in main (argc=3, argv=0x7fffaaa3a1c0) at core/yade.cpp:255
#0  0x0000003001095af5 in waitpid () from /lib/libc.so.6

################################################################################
TetraTestGen: generator CRASH
################################################################################
Constructing ClassFactory  (if multiple times - check '-rdynamic' flag!).
Constructing SerializableSingleton  (if multiple times - check '-rdynamic' flag!).
WARNING: cannot open file used for capillary law, in TriaxalTestWater
43520.3
194711
191169
4417.66
-46343.2
11996.2
yade-svn1368: /tmp/yade-26182/build-svn1368/include/yade-svn1368/yade/lib-multimethods/DynLibDispatcher.hpp:447: bool DynLibDispatcher<BaseClass, Executor, ResultType, TList, autoSymmetry>::locateMultivirtualFunctor2D(int&, int&, boost::shared_ptr<typename Loki::TL::TypeAtNonStrict<typename Loki::TL::Append<Loki::NullType, T>::Result, 0u, Loki::NullType>::Result>&, boost::shared_ptr<typename Loki::TL::TypeAtNonStrict<typename Loki::TL::Append<Loki::NullType, T>::Result, 1u, Loki::NullType>::Result>&) [with BaseClass = Loki::Typelist<InteractingGeometry, Loki::Typelist<BoundingVolume, Loki::NullType> >, Executor = BoundingVolumeEngineUnit, ResultType = void, TList = Loki::Typelist<const boost::shared_ptr<InteractingGeometry>&, Loki::Typelist<boost::shared_ptr<BoundingVolume>&, Loki::Typelist<const Se3r&, Loki::Typelist<const Body*, Loki::NullType> > > >, bool autoSymmetry = true]: Assertion `index1 >= 0 && (unsigned int)( index1 ) < callBacks.size() && index2 >= 0 && (unsigned
  int)( index2 ) < callBacks[index1].size()' failed.
Running script /tmp/yade-test-28814.py
SIGSEGV/SIGABRT handler called; gdb batch file is `/home/profesori/eudoxos/.yade-svn1368/gdb_crash_batch-pid28917'
GNU gdb 6.6-debian
Copyright (C) 2006 Free Software Foundation, Inc.
GDB is free software, covered by the GNU General Public License, and you are
welcome to change it and/or distribute copies of it under certain conditions.
Type "show copying" to see the conditions.
There is absolutely no warranty for GDB.  Type "show warranty" for details.
This GDB was configured as "x86_64-linux-gnu".
Using host libthread_db library "/lib/libthread_db.so.1".
[Thread debugging using libthread_db enabled]
[New Thread 47440684769984 (LWP 28917)]
0x0000003001095af5 in waitpid () from /lib/libc.so.6
No symbol "info" in current context.

Thread 1 (Thread 47440684769984 (LWP 28917)):
#0  0x0000003001095af5 in waitpid () from /lib/libc.so.6
#1  0x000000300103c763 in ?? () from /lib/libc.so.6
#2  0x00000000005705c3 in sigHandler (sig=6) at core/yade.cpp:58
#3  <signal handler called>
#4  0x0000003001030cab in raise () from /lib/libc.so.6
#5  0x0000003001032660 in abort () from /lib/libc.so.6
#6  0x000000300102a436 in __assert_fail () from /lib/libc.so.6
#7  0x00002b25a9b0d5e1 in DynLibDispatcher<Loki::Typelist<InteractingGeometry, Loki::Typelist<BoundingVolume, Loki::NullType> >, BoundingVolumeEngineUnit, void, Loki::Typelist<boost::shared_ptr<InteractingGeometry> const&, Loki::Typelist<boost::shared_ptr<BoundingVolume>&, Loki::Typelist<Se3<double> const&, Loki::Typelist<Body const*, Loki::NullType> > > >, true>::locateMultivirtualFunctor2D (this=0xa4eba0, index1=@0x7fff093cf1dc, index2=@0x7fff093cf1d8, base1=@0xa545b8, base2=@0xa545c8) at /tmp/yade-26182/build-svn1368/include/yade-svn1368/yade/lib-multimethods/DynLibDispatcher.hpp:446
#8  0x00002b25a9b0d95b in DynLibDispatcher<Loki::Typelist<InteractingGeometry, Loki::Typelist<BoundingVolume, Loki::NullType> >, BoundingVolumeEngineUnit, void, Loki::Typelist<boost::shared_ptr<InteractingGeometry> const&, Loki::Typelist<boost::shared_ptr<BoundingVolume>&, Loki::Typelist<Se3<double> const&, Loki::Typelist<Body const*, Loki::NullType> > > >, true>::operator() (this=0xa4eba0, base1=@0xa545b8, base2=@0xa545c8, p3=@0xa54770, p4=0xa54570) at /tmp/yade-26182/build-svn1368/include/yade-svn1368/yade/lib-multimethods/DynLibDispatcher.hpp:856
#9  0x00002b25a9b02e25 in BoundingVolumeMetaEngine::action (this=0xa4eb60, ncb=0xa4e840) at pkg/common/Engine/MetaEngine/BoundingVolumeMetaEngine.cpp:27
#10 0x0000000000516b85 in MetaBody::runInitializers (this=0xa4e840) at core/MetaBody.cpp:43
#11 0x0000000000516c44 in MetaBody::postProcessAttributes (this=0xa4e840, deserializing=false) at core/MetaBody.cpp:49
#12 0x00002b25a39dc154 in Serializable::unregisterSerializableAttributes (this=0xa4e840, deserializing=false) at lib/serialization/Serializable.cpp:29
#13 0x00002b25a54b68a5 in XMLFormatManager::serializeSerializable (stream=@0x7fff093cf570, ac=@0xa58480, depth=1) at lib/serialization-xml/XMLFormatManager.cpp:168
#14 0x00002b25a54b5258 in XMLFormatManager::serializeSmartPointer (stream=@0x7fff093cf570, ac=@0xa583f0, depth=1) at lib/serialization-xml/XMLFormatManager.cpp:284
#15 0x0000000000505c62 in IOFormatManager::saveToFile<boost::shared_ptr<MetaBody> > (libName=@0xa4e580, fileName=@0xa4e578, name=@0x7fff093cfa80, t=@0xa4e568) at /tmp/yade-26182/build-svn1368/include/yade-svn1368/yade/lib-serialization/IOFormatManager.tpp:59
#16 0x00000000004f161f in FileGenerator::generateAndSave (this=0xa4e500) at core/FileGenerator.cpp:89
#17 0x00002b25c7d6e110 in pyFileGenerator::generate (this=0xa4e6a0, outFile=@0x7fff093cfde0) at gui/py/yadeControl.cpp:263
#18 0x00002b25c7d509f7 in boost::python::detail::invoke<boost::python::to_python_value<bool const&>, bool (pyFileGenerator::*)(std::string), boost::python::arg_from_python<pyFileGenerator&>, boost::python::arg_from_python<std::string> > (rc=@0x7fff093cfe7e, f=@0xa49438, tc=@0x7fff093cfe60, ac0=@0x7fff093cfe80) at /usr/include/boost/python/detail/invoke.hpp:88
#19 0x00002b25c7d50b5a in boost::python::detail::caller_arity<2u>::impl<bool (pyFileGenerator::*)(std::string), boost::python::default_call_policies, boost::mpl::vector3<bool, pyFileGenerator&, std::string> >::operator() (this=0xa49438, args_=0x2b25a54809e0) at /usr/include/boost/python/detail/caller.hpp:199
#20 0x00002b25c7d50c05 in boost::python::objects::caller_py_function_impl<boost::python::detail::caller<bool (pyFileGenerator::*)(std::string), boost::python::default_call_policies, boost::mpl::vector3<bool, pyFileGenerator&, std::string> > >::operator() (this=0xa49430, args=0x2b25a54809e0, kw=0x0) at /usr/include/boost/python/object/py_function.hpp:38
#21 0x00002b25a335d89d in boost::python::objects::function::call () from /usr/lib/libboost_python-gcc-mt-1_33_1.so.1.33.1
#22 0x00002b25a335e825 in boost::detail::function::void_function_obj_invoker0<boost::python::objects::(anonymous namespace)::bind_return, void>::invoke () from /usr/lib/libboost_python-gcc-mt-1_33_1.so.1.33.1
#23 0x00002b25a1dcb8cf in boost::function0<void, std::allocator<boost::function_base> >::operator() () from /usr/lib/libboost_thread-gcc-mt-1_33_1.so.1.33.1
#24 0x00002b25a33638f8 in boost::python::handle_exception_impl () from /usr/lib/libboost_python-gcc-mt-1_33_1.so.1.33.1
#25 0x00002b25a335ddb7 in boost::python::handle_exception<boost::python::objects::(anonymous namespace)::bind_return> () from /usr/lib/libboost_python-gcc-mt-1_33_1.so.1.33.1
#26 0x00002b25a335ac9e in ?? () from /usr/lib/libboost_python-gcc-mt-1_33_1.so.1.33.1
#27 0x00002b25a173b033 in PyObject_Call () from /usr/lib/libpython2.5.so.1.0
#28 0x00002b25a17b6919 in PyEval_EvalFrameEx () from /usr/lib/libpython2.5.so.1.0
#29 0x00002b25a17bc6c6 in PyEval_EvalCodeEx () from /usr/lib/libpython2.5.so.1.0
#30 0x00002b25a17bc702 in PyEval_EvalCode () from /usr/lib/libpython2.5.so.1.0
#31 0x00002b25a17df561 in PyRun_FileExFlags () from /usr/lib/libpython2.5.so.1.0
#32 0x00002b25a17b38a4 in ?? () from /usr/lib/libpython2.5.so.1.0
#33 0x00002b25a17bb8d5 in PyEval_EvalFrameEx () from /usr/lib/libpython2.5.so.1.0
#34 0x00002b25a17bc6c6 in PyEval_EvalCodeEx () from /usr/lib/libpython2.5.so.1.0
#35 0x00002b25a17bc702 in PyEval_EvalCode () from /usr/lib/libpython2.5.so.1.0
#36 0x00002b25a17df561 in PyRun_FileExFlags () from /usr/lib/libpython2.5.so.1.0
#37 0x00002b25a17df7e8 in PyRun_SimpleFileExFlags () from /usr/lib/libpython2.5.so.1.0
#38 0x00002b25af0d4c1b in PythonUI::execScript (script=@0x7fff093d0fa0) at gui/py/PythonUI.cpp:42
#39 0x00002b25af0d5ae2 in PythonUI::pythonSession () at gui/py/PythonUI.cpp:92
#40 0x00002b25af0d62e2 in PythonUI::run (this=0xa298e0, argc=3, argv=0x7fff093d1b60) at gui/py/PythonUI.cpp:121
#41 0x0000000000570061 in main (argc=3, argv=0x7fff093d1b60) at core/yade.cpp:255
#0  0x0000003001095af5 in waitpid () from /lib/libc.so.6

################################################################################
ThreePointBending: simulation CRASH
################################################################################
Constructing ClassFactory  (if multiple times - check '-rdynamic' flag!).
Constructing SerializableSingleton  (if multiple times - check '-rdynamic' flag!).
WARNING: cannot open file used for capillary law, in TriaxalTestWater
SIGSEGV/SIGABRT handler called; gdb batch file is `/home/profesori/eudoxos/.yade-svn1368/gdb_crash_batch-pid28933'
GNU gdb 6.6-debian
Copyright (C) 2006 Free Software Foundation, Inc.
GDB is free software, covered by the GNU General Public License, and you are
welcome to change it and/or distribute copies of it under certain conditions.
Type "show copying" to see the conditions.
There is absolutely no warranty for GDB.  Type "show warranty" for details.
This GDB was configured as "x86_64-linux-gnu".
Using host libthread_db library "/lib/libthread_db.so.1".
[Thread debugging using libthread_db enabled]
[New Thread 47283464422080 (LWP 28933)]
[New Thread 1082132800 (LWP 28934)]
0x00000030010961d1 in nanosleep () from /lib/libc.so.6
No symbol "info" in current context.

Thread 2 (Thread 1082132800 (LWP 28934)):
#0  0x0000003001095b2f in waitpid () from /lib/libc.so.6
#1  0x000000300103c763 in ?? () from /lib/libc.so.6
#2  0x000000300103cad7 in system () from /lib/libc.so.6
#3  0x00000000005705c3 in sigHandler (sig=11) at core/yade.cpp:58
#4  <signal handler called>
#5  0x0000000000573392 in BodyRedirectionVector::operator[] (this=0xa56f20, id=0) at core/DefaultContainerImplementations/BodyRedirectionVector.cpp:205
#6  0x00002b011bfe02f1 in TranslationEngine::applyCondition (this=0xa58950, ncb=0xa54660) at pkg/common/Engine/DeusExMachina/TranslationEngine.cpp:38
#7  0x00000000004ead25 in DeusExMachina::action (this=0xa58950, b=0xa54660) at core/DeusExMachina.cpp:20
#8  0x0000000000516a47 in MetaBody::moveToNextTimeStep (this=0xa54660) at core/MetaBody.cpp:81
#9  0x0000000000567411 in SimulationFlow::singleAction (this=0x806680) at core/SimulationFlow.cpp:17
#10 0x00000000005691dc in ThreadWorker::callSingleAction (this=0x806680) at core/ThreadWorker.cpp:71
#11 0x0000000000568909 in ThreadRunner::call (this=0xa4e660) at core/ThreadRunner.cpp:42
#12 0x000000000056896d in ThreadRunner::run (this=0xa4e660) at core/ThreadRunner.cpp:21
#13 0x0000000000568d79 in boost::_mfi::mf0<void, ThreadRunner>::operator() (this=0xa3af30, p=0xa4e660) at /usr/include/boost/bind/mem_fn_template.hpp:45
#14 0x0000000000568dfa in boost::_bi::list1<boost::_bi::value<ThreadRunner*> >::operator()<boost::_mfi::mf0<void, ThreadRunner>, boost::_bi::list0> (this=0xa3af40, f=@0xa3af30, a=@0x4080004f) at /usr/include/boost/bind.hpp:230
#15 0x0000000000568e3d in boost::_bi::bind_t<void, boost::_mfi::mf0<void, ThreadRunner>, boost::_bi::list1<boost::_bi::value<ThreadRunner*> > >::operator() (this=0xa3af30) at /usr/include/boost/bind/bind_template.hpp:20
#16 0x0000000000568e62 in boost::detail::function::void_function_obj_invoker0<boost::_bi::bind_t<void, boost::_mfi::mf0<void, ThreadRunner>, boost::_bi::list1<boost::_bi::value<ThreadRunner*> > >, void>::invoke (function_obj_ptr={obj_ptr = 0xa3af30, const_obj_ptr = 0xa3af30, func_ptr = 0xa3af30, data = "0"}) at /usr/include/boost/function/function_template.hpp:136
#17 0x00002b0106cc98cf in boost::function0<void, std::allocator<boost::function_base> >::operator() () from /usr/lib/libboost_thread-gcc-mt-1_33_1.so.1.33.1
#18 0x00002b0106cc92ef in ?? () from /usr/lib/libboost_thread-gcc-mt-1_33_1.so.1.33.1
#19 0x00000030024062a5 in start_thread () from /lib/libpthread.so.0
#20 0x00000030010cf61d in clone () from /lib/libc.so.6
#21 0x0000000000000000 in ?? ()

Thread 1 (Thread 47283464422080 (LWP 28933)):
#0  0x00000030010961d1 in nanosleep () from /lib/libc.so.6
#1  0x00000030010c9134 in usleep () from /lib/libc.so.6
#2  0x00002b012cc714ee in pyOmega::wait (this=0xa3af20) at gui/py/yadeControl.cpp:386
#3  0x00002b012cbb0c77 in boost::python::detail::invoke<int, void (pyOmega::*)(), boost::python::arg_from_python<pyOmega&> > (f=@0xa26d58, tc=@0x7fffa44cff90) at /usr/include/boost/python/detail/invoke.hpp:94
#4  0x00002b012cc07e9c in boost::python::detail::caller_arity<1u>::impl<void (pyOmega::*)(), boost::python::default_call_policies, boost::mpl::vector2<void, pyOmega&> >::operator() (this=0xa26d58, args_=0x2b010a39bad0) at /usr/include/boost/python/detail/caller.hpp:199
#5  0x00002b012cc07ef5 in boost::python::objects::caller_py_function_impl<boost::python::detail::caller<void (pyOmega::*)(), boost::python::default_call_policies, boost::mpl::vector2<void, pyOmega&> > >::operator() (this=0xa26d50, args=0x2b010a39bad0, kw=0x0) at /usr/include/boost/python/object/py_function.hpp:38
#6  0x00002b010825b89d in boost::python::objects::function::call () from /usr/lib/libboost_python-gcc-mt-1_33_1.so.1.33.1
#7  0x00002b010825c825 in boost::detail::function::void_function_obj_invoker0<boost::python::objects::(anonymous namespace)::bind_return, void>::invoke () from /usr/lib/libboost_python-gcc-mt-1_33_1.so.1.33.1
#8  0x00002b0106cc98cf in boost::function0<void, std::allocator<boost::function_base> >::operator() () from /usr/lib/libboost_thread-gcc-mt-1_33_1.so.1.33.1
#9  0x00002b01082618f8 in boost::python::handle_exception_impl () from /usr/lib/libboost_python-gcc-mt-1_33_1.so.1.33.1
#10 0x00002b010825bdb7 in boost::python::handle_exception<boost::python::objects::(anonymous namespace)::bind_return> () from /usr/lib/libboost_python-gcc-mt-1_33_1.so.1.33.1
#11 0x00002b0108258c9e in ?? () from /usr/lib/libboost_python-gcc-mt-1_33_1.so.1.33.1
#12 0x00002b0106639033 in PyObject_Call () from /usr/lib/libpython2.5.so.1.0
#13 0x00002b01066b4919 in PyEval_EvalFrameEx () from /usr/lib/libpython2.5.so.1.0
#14 0x00002b01066ba6c6 in PyEval_EvalCodeEx () from /usr/lib/libpython2.5.so.1.0
#15 0x00002b01066ba702 in PyEval_EvalCode () from /usr/lib/libpython2.5.so.1.0
#16 0x00002b01066dd561 in PyRun_FileExFlags () from /usr/lib/libpython2.5.so.1.0
#17 0x00002b01066b18a4 in ?? () from /usr/lib/libpython2.5.so.1.0
#18 0x00002b01066b98d5 in PyEval_EvalFrameEx () from /usr/lib/libpython2.5.so.1.0
#19 0x00002b01066ba6c6 in PyEval_EvalCodeEx () from /usr/lib/libpython2.5.so.1.0
#20 0x00002b01066ba702 in PyEval_EvalCode () from /usr/lib/libpython2.5.so.1.0
#21 0x00002b01066dd561 in PyRun_FileExFlags () from /usr/lib/libpython2.5.so.1.0
#22 0x00002b01066dd7e8 in PyRun_SimpleFileExFlags () from /usr/lib/libpython2.5.so.1.0
#23 0x00002b0113fd2c1b in PythonUI::execScript (script=@0x7fffa44d10a0) at gui/py/PythonUI.cpp:42
#24 0x00002b0113fd3ae2 in PythonUI::pythonSession () at gui/py/PythonUI.cpp:92
#25 0x00002b0113fd42e2 in PythonUI::run (this=0xa298e0, argc=3, argv=0x7fffa44d1c60) at gui/py/PythonUI.cpp:121
#26 0x0000000000570061 in main (argc=3, argv=0x7fffa44d1c60) at core/yade.cpp:255
#0  0x00000030010961d1 in nanosleep () from /lib/libc.so.6
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Follow ups

Re: Automated crash report for /tmp/yade-26182/bin/yade-svn1368: SDECLinkedSpheres, ScrewGen, TetraTestGen, ThreePointBending
From: milauer <eudoxos@xxxxxxxx>, 2008-05-25