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[Chareyre <674000@xxxxxxxxxxxxxxxxxx>]

Chiara, it seems to me that the flag homoDeform have been shifted. The 
old homo=1 and homo=2 is now homo=2 and homo=3.
I don't know what the new homo=1 means, so I can't really explain what 
happens in that case.

-- 
homoDeform=1 does not handle the periodic case correctly.
https://bugs.launchpad.net/bugs/674000
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Status in Yet Another Dynamic Engine: New

Bug description:
Currently, in the periodic case, if homoDeform=1 (alias Cundall way) we do not adjust the values of the relative velocities as according to the velocity gradient. This should be done, since, in such a case, we only update particle positions and not particle velocities.