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Re: [Question #662276]: yade --check

To: yade-users@xxxxxxxxxxxxxxxxxxx
From: azim <question662276@xxxxxxxxxxxxxxxxxxxxx>
Date: Thu, 04 Jan 2018 21:32:35 -0000
Reply-to: question662276@xxxxxxxxxxxxxxxxxxxxx
Sender: bounces@xxxxxxxxxxxxx
Question #662276 on Yade changed:
https://answers.launchpad.net/yade/+question/662276

    Status: Answered => Open

azim is still having a problem:
Dear Robert and Jerome,

I removed any installed yade on my system and, started installing from
the beginning.

Here is my system features:
Linux azim-X450LCP 4.4.0-104-generic #127-Ubuntu SMP Mon Dec 11 12:16:42 UTC 2017 x86_64 x86_64 x86_64 GNU/Linux

Distributor ID:	Ubuntu
Description:	Ubuntu 16.04.3 LTS
Release:	16.04
Codename:	xenial

 
This is the procedure:
……………………………………………………………...
git clone git@xxxxxxxxxx:yade/trunk.git
Cloning into 'trunk'...
remote: Counting objects: 88821, done.
remote: Compressing objects: 100% (38/38), done.
remote: Total 88821 (delta 15), reused 21 (delta 10), pack-reused 88773
Receiving objects: 100% (88821/88821), 71.29 MiB | 67.00 KiB/s, done.
Resolving deltas: 100% (66261/66261), done.
Checking connectivity... done.
…………………………………………………………………………………………………………………………..


sudo add-apt-repository ppa:yade-users/external
[sudo] password for azim: 
 More recent version of various external packages, which are less functional or buggy in ubuntu repositories.
 More info: https://launchpad.net/~yade-users/+archive/ubuntu/external
Press [ENTER] to continue or ctrl-c to cancel adding it

gpg: keyring `/tmp/tmpv7ch7jog/secring.gpg' created
gpg: keyring `/tmp/tmpv7ch7jog/pubring.gpg' created
gpg: requesting key 6D76D006 from hkp server keyserver.ubuntu.com
gpg: /tmp/tmpv7ch7jog/trustdb.gpg: trustdb created
gpg: key 6D76D006: public key "Launchpad PPA for yade-users" imported
gpg: Total number processed: 1
gpg:               imported: 1  (RSA: 1)
OK
.................................................................................................................................
azim@azim-X450LCP:~$ sudo apt-get update
Hit:1 https://repo.skype.com/deb stable InRelease                      
Get:2 http://ppa.launchpad.net/atareao/telegram/ubuntu xenial InRelease [17.5 kB]
Hit:3 http://archive.ubuntu.com/ubuntu xenial InRelease   
Get:4 http://archive.ubuntu.com/ubuntu xenial-updates InRelease [102 kB]       
Ign:2 http://ppa.launchpad.net/atareao/telegram/ubuntu xenial InRelease        
Hit:5 http://ppa.launchpad.net/deadsnakes/ppa/ubuntu xenial InRelease          
Get:6 http://archive.ubuntu.com/ubuntu xenial-backports InRelease [102 kB]     
Hit:7 http://ppa.launchpad.net/jonathonf/python-3.6/ubuntu xenial InRelease    
Get:8 http://archive.ubuntu.com/ubuntu xenial-security InRelease [102 kB]      
Hit:9 http://ppa.launchpad.net/kubuntu-ppa/backports/ubuntu xenial InRelease   
Get:10 http://ppa.launchpad.net/nilarimogard/webupd8/ubuntu xenial InRelease [17.5 kB]
Get:11 http://archive.ubuntu.com/ubuntu xenial-updates/main amd64 DEP-11 Metadata [307 kB]
Ign:10 http://ppa.launchpad.net/nilarimogard/webupd8/ubuntu xenial InRelease   
Hit:12 http://ppa.launchpad.net/noobslab/apps/ubuntu xenial InRelease          
Hit:13 http://ppa.launchpad.net/stebbins/handbrake-releases/ubuntu xenial InRelease
Ign:14 http://ppa.launchpad.net/yade-users/external/ubuntu xenial InRelease    
Get:15 http://archive.ubuntu.com/ubuntu xenial-updates/main DEP-11 64x64 Icons [210 kB]
Get:16 http://archive.ubuntu.com/ubuntu xenial-updates/universe amd64 DEP-11 Metadata [185 kB]
Get:17 http://archive.ubuntu.com/ubuntu xenial-updates/universe DEP-11 64x64 Icons [265 kB]
Get:18 http://archive.ubuntu.com/ubuntu xenial-updates/multiverse amd64 DEP-11 Metadata [5,892 B]
Get:19 http://archive.ubuntu.com/ubuntu xenial-backports/universe amd64 DEP-11 Metadata [4,712 B]
Get:20 http://archive.ubuntu.com/ubuntu xenial-backports/main amd64 DEP-11 Metadata [3,328 B]
Get:21 http://archive.ubuntu.com/ubuntu xenial-security/main amd64 DEP-11 Metadata [62.4 kB]
Get:22 http://archive.ubuntu.com/ubuntu xenial-security/main DEP-11 64x64 Icons [57.6 kB]
Get:23 http://archive.ubuntu.com/ubuntu xenial-security/universe amd64 DEP-11 Metadata [51.3 kB]
Get:24 http://archive.ubuntu.com/ubuntu xenial-security/universe DEP-11 64x64 Icons [80.2 kB]
Ign:25 http://ppa.launchpad.net/yade-users/external/ubuntu xenial Release      
Ign:26 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main amd64 Packages
Ign:27 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main i386 Packages
Ign:28 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main all Packages
Ign:29 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main Translation-en_US
Ign:30 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main Translation-en
Ign:31 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main amd64 DEP-11 Metadata
Ign:32 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main DEP-11 64x64 Icons
Ign:26 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main amd64 Packages
Ign:27 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main i386 Packages
Ign:28 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main all Packages
Ign:29 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main Translation-en_US
Ign:30 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main Translation-en
Ign:31 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main amd64 DEP-11 Metadata
Ign:32 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main DEP-11 64x64 Icons
Ign:26 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main amd64 Packages
Ign:27 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main i386 Packages
Ign:28 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main all Packages
Ign:29 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main Translation-en_US
Ign:30 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main Translation-en
Ign:31 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main amd64 DEP-11 Metadata
Ign:32 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main DEP-11 64x64 Icons
Ign:26 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main amd64 Packages
Ign:27 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main i386 Packages
Ign:28 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main all Packages
Ign:29 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main Translation-en_US
Ign:30 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main Translation-en
Ign:31 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main amd64 DEP-11 Metadata
Ign:32 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main DEP-11 64x64 Icons
Ign:26 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main amd64 Packages
Ign:27 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main i386 Packages
Ign:28 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main all Packages
Ign:29 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main Translation-en_US
Ign:30 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main Translation-en
Ign:31 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main amd64 DEP-11 Metadata
Ign:32 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main DEP-11 64x64 Icons
Err:26 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main amd64 Packages
  404  Not Found
Ign:27 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main i386 Packages
Ign:28 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main all Packages
Ign:29 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main Translation-en_US
Ign:30 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main Translation-en
Ign:31 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main amd64 DEP-11 Metadata
Ign:32 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main DEP-11 64x64 Icons
Fetched 1,574 kB in 4min 41s (5,589 B/s)
Reading package lists... Done
W: Target Packages (main/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list.d/skype-stable.list:1 and /etc/apt/sources.list.d/skypeforlinux.list:1
W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list.d/skype-stable.list:1 and /etc/apt/sources.list.d/skypeforlinux.list:1
W: Target Translations (main/i18n/Translation-en_US) is configured multiple times in /etc/apt/sources.list.d/skype-stable.list:1 and /etc/apt/sources.list.d/skypeforlinux.list:1
W: Target Translations (main/i18n/Translation-en) is configured multiple times in /etc/apt/sources.list.d/skype-stable.list:1 and /etc/apt/sources.list.d/skypeforlinux.list:1
W: Target DEP-11 (main/dep11/Components-amd64.yml) is configured multiple times in /etc/apt/sources.list.d/skype-stable.list:1 and /etc/apt/sources.list.d/skypeforlinux.list:1
W: Target DEP-11-icons (main/dep11/icons-64x64.tar) is configured multiple times in /etc/apt/sources.list.d/skype-stable.list:1 and /etc/apt/sources.list.d/skypeforlinux.list:1
W: GPG error: http://ppa.launchpad.net/atareao/telegram/ubuntu xenial InRelease: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 6A9653F936FD5529
W: The repository 'http://ppa.launchpad.net/atareao/telegram/ubuntu xenial InRelease' is not signed.
N: Data from such a repository can't be authenticated and is therefore potentially dangerous to use.
N: See apt-secure(8) manpage for repository creation and user configuration details.
W: GPG error: http://ppa.launchpad.net/nilarimogard/webupd8/ubuntu xenial InRelease: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 531EE72F4C9D234C
W: The repository 'http://ppa.launchpad.net/nilarimogard/webupd8/ubuntu xenial InRelease' is not signed.
N: Data from such a repository can't be authenticated and is therefore potentially dangerous to use.
N: See apt-secure(8) manpage for repository creation and user configuration details.
W: The repository 'http://ppa.launchpad.net/yade-users/external/ubuntu xenial Release' does not have a Release file.
N: Data from such a repository can't be authenticated and is therefore potentially dangerous to use.
N: See apt-secure(8) manpage for repository creation and user configuration details.
E: Failed to fetch http://ppa.launchpad.net/yade-users/external/ubuntu/dists/xenial/main/binary-amd64/Packages  404  Not Found
E: Some index files failed to download. They have been ignored, or old ones used instead.
W: Target Packages (main/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list.d/skype-stable.list:1 and /etc/apt/sources.list.d/skypeforlinux.list:1
W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list.d/skype-stable.list:1 and /etc/apt/sources.list.d/skypeforlinux.list:1
W: Target Translations (main/i18n/Translation-en_US) is configured multiple times in /etc/apt/sources.list.d/skype-stable.list:1 and /etc/apt/sources.list.d/skypeforlinux.list:1
W: Target Translations (main/i18n/Translation-en) is configured multiple times in /etc/apt/sources.list.d/skype-stable.list:1 and /etc/apt/sources.list.d/skypeforlinux.list:1
W: Target DEP-11 (main/dep11/Components-amd64.yml) is configured multiple times in /etc/apt/sources.list.d/skype-stable.list:1 and /etc/apt/sources.list.d/skypeforlinux.list:1
W: Target DEP-11-icons (main/dep11/icons-64x64.tar) is configured multiple times in /etc/apt/sources.list.d/skype-stable.list:1 and /etc/apt/sources.list.d/skypeforlinux.list:1
……………………………………………………………………………………………………


sudo apt-get install cmake git freeglut3-dev libloki-dev \
> libboost-all-dev fakeroot dpkg-dev build-essential g++ \
> python-dev ipython python-matplotlib libsqlite3-dev python-numpy python-tk gnuplot \
> libgts-dev python-pygraphviz libvtk6-dev python-numpy libeigen3-dev \
> python-xlib python-pyqt5 pyqt5-dev-tools python-pyqt5.qtwebkit gtk2-engines-pixbuf python-argparse python-pyqt5.qtsvg \
> libqglviewer-dev python-imaging libjs-jquery python-sphinx python-git python-bibtex \
> libxmu-dev libxi-dev libcgal-dev help2man libbz2-dev zlib1g-dev python-minieigen
Reading package lists... Done
Building dependency tree       
Reading state information... Done
Note, selecting 'libpython2.7-stdlib' instead of 'python-argparse'
build-essential is already the newest version (12.1ubuntu2).
fakeroot is already the newest version (1.20.2-1ubuntu1).
g++ is already the newest version (4:5.3.1-1ubuntu1).
libbz2-dev is already the newest version (1.0.6-8).
libjs-jquery is already the newest version (1.11.3+dfsg-4).
libsqlite3-dev is already the newest version (3.11.0-1ubuntu1).
libxi-dev is already the newest version (2:1.7.6-1).
libxmu-dev is already the newest version (2:1.1.2-2).
python-dev is already the newest version (2.7.11-1).
python-numpy is already the newest version (1:1.11.0-1ubuntu1).
python-tk is already the newest version (2.7.11-2).
freeglut3-dev is already the newest version (2.8.1-2).
gnuplot is already the newest version (4.6.6-3).
help2man is already the newest version (1.47.3).
ipython is already the newest version (2.4.1-1).
libboost-all-dev is already the newest version (1.58.0.1ubuntu1).
libcgal-dev is already the newest version (4.7-4).
libeigen3-dev is already the newest version (3.3~beta1-2).
libgts-dev is already the newest version (0.7.6+darcs121130-1.2).
libloki-dev is already the newest version (0.1.7-3ubuntu1).
libqglviewer-dev is already the newest version (2.6.3+dfsg1-1).
libvtk6-dev is already the newest version (6.2.0+dfsg1-10build1).
python-bibtex is already the newest version (1.2.7-1).
python-git is already the newest version (1.0.1+git137-gc8b8379-2.1).
python-matplotlib is already the newest version (1.5.1-1ubuntu1).
python-minieigen is already the newest version (0.50.3+dfsg1-4build1).
python-pygraphviz is already the newest version (1.3.1-0ubuntu2).
python-xlib is already the newest version (0.14+20091101-5).
cmake is already the newest version (3.5.1-1ubuntu3).
dpkg-dev is already the newest version (1.18.4ubuntu1.3).
git is already the newest version (1:2.7.4-0ubuntu1.3).
libpython2.7-stdlib is already the newest version (2.7.12-1ubuntu0~16.04.2).
zlib1g-dev is already the newest version (1:1.2.8.dfsg-2ubuntu4.1).
gtk2-engines-pixbuf is already the newest version (2.24.30-1ubuntu1.16.04.2).
python-imaging is already the newest version (3.1.2-0ubuntu1.1).
python-sphinx is already the newest version (1.3.6-2ubuntu1.1).
pyqt5-dev-tools is already the newest version (5.5.1+dfsg-3ubuntu5~xenialoverlay11~1).
python-pyqt5 is already the newest version (5.5.1+dfsg-3ubuntu5~xenialoverlay11~1).
python-pyqt5.qtwebkit is already the newest version (5.5.1+dfsg-3ubuntu5~xenialoverlay11~1).
python-pyqt5.qtsvg is already the newest version (5.5.1+dfsg-3ubuntu5~xenialoverlay11~1).
The following package was automatically installed and is no longer required:
  libllvm4.0
Use 'sudo apt autoremove' to remove it.
0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
…………………………………………………………………………………………………………………..


sudo apt-get install python-gts
Reading package lists... Done
Building dependency tree       
Reading state information... Done
python-gts is already the newest version (0.3.1-6).
The following package was automatically installed and is no longer required:
  libllvm4.0
Use 'sudo apt autoremove' to remove it.
0 upgraded, 0 newly installed, 0 to remove and 1 not upgraded.
……………………………………………………………………………………………………………..
sudo apt-get install libopenblas-dev libsuitesparse-metis-dev
Reading package lists... Done
Building dependency tree       
Reading state information... Done
Package libsuitesparse-metis-dev is not available, but is referred to by another package.
This may mean that the package is missing, has been obsoleted, or
is only available from another source
However the following packages replace it:
  libsuitesparse-dev:i386 libsuitesparse-dev

E: Package 'libsuitesparse-metis-dev' has no installation candidate
……………………………………………………………………………………………………………...

###################################################
QQ) PLEASE: help me to solve above errors.
after solving them, I want to start compilation.
any comment about  DEM-PFV packages is welcomed.

I really really really, appreciate your help
thanks

Azim

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