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Message #17373
[Question #669686]: TwoPhaseFlowEngine.cpp : compilation error
New question #669686 on Yade:
https://answers.launchpad.net/yade/+question/669686
I am using an OPENSUSE OS leap 42.3 and I have able to compile all git veriosn upt o May 15 but the last one generates error during the TwoPhaseFlowEngine.cpp.o generation; here the cmake and the error message.
I guess that some variable declaration are not made by default?
when I start from scratch : new trunk and build folder, this is the result:
cmake -Wno-error=deprecated -DCMAKE_VERBOSE_MAKEFILE=ON -DUSE_QT5=OFF -DENABLE_GTS=ON -DENABLE_VTK=ON ../trunk
-- The C compiler identification is GNU 4.8.5
-- The CXX compiler identification is GNU 4.8.5
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found PythonInterp: /usr/bin/python (found version "2.7.13")
-- Try OpenMP C flag = [-fopenmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Success
-- Try OpenMP CXX flag = [-fopenmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Success
-- Found OpenMP: -fopenmp
-- Looking for Q_WS_X11
-- Looking for Q_WS_X11 - found
-- Looking for Q_WS_WIN
-- Looking for Q_WS_WIN - not found
-- Looking for Q_WS_QWS
-- Looking for Q_WS_QWS - not found
-- Looking for Q_WS_MAC
-- Looking for Q_WS_MAC - not found
-- Found Qt4: /usr/bin/qmake (found version "4.8.6")
-- Found PkgConfig: /usr/bin/pkg-config (found version "0.28")
-- Version is set to 2018-05-24.git-0e4dac9
-- Found OpenGL: /usr/lib64/libGL.so
-- GTS using gts-config /usr/bin/gts-config
-- Using GTS from /usr
-- Found GL2PS: /usr/lib64/libgl2ps.so
-- Found CGAL: /usr/include, /usr/lib64/libCGAL.so
-- Found NumPy: version "1.8.0" /usr/lib64/python2.7/site-packages/numpy/core/include
-- Found Loki: /usr/include
-- GCC Version >= 4.8. Adding -ftrack-macro-expansion=0
-- GCC Version >= 4.8. Adding -save-temps
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Boost version: 1.61.0
-- Found the following Boost libraries:
-- python
-- thread
-- filesystem
-- iostreams
-- regex
-- serialization
-- system
-- date_time
-- chrono
-- atomic
-- Boost_VERSION: 106100
-- Boost_LIB_VERSION: 1_61
-- Boost_INCLUDE_DIRS: /usr/include
-- Boost_LIBRARIES: /usr/lib64/libboost_python-mt.so/usr/lib64/libboost_thread-mt.so/usr/lib64/libboost_filesystem-mt.so/usr/lib64/libboost_iostreams-mt.so/usr/lib64/libboost_regex-mt.so/usr/lib64/libboost_serialization-mt.so/usr/lib64/libboost_system-mt.so/usr/lib64/libboost_date_time-mt.so/usr/lib64/libboost_chrono-mt.so/usr/lib64/libboost_atomic-mt.so
-- Found Eigen3: /usr/include/eigen3 (Required is at least version "2.91.0")
-- Found BZip2: /usr/lib64/libbz2.so (found version "1.0.6")
-- Looking for BZ2_bzCompressInit
-- Looking for BZ2_bzCompressInit - found
-- Found ZLIB: /usr/lib64/libz.so (found version "1.2.8")
-- Found PythonLibs: /usr/lib64/libpython2.7.so (found version "2.7.13")
-- Found Eigen3, version: 3.2.9
-- Disable vectorization
-- Found VTK
-- Found OpenMP
-- GTS using gts-config /usr/bin/gts-config
-- Using GTS from /usr
-- Checking for one of the modules 'glib-2.0'
-- Found GLib2: glib-2.0 /usr/include/glib-2.0;/usr/lib64/glib-2.0/include
-- Looking for include file glib/gregex.h
-- Looking for include file glib/gregex.h - not found
-- Found GTS
-- Found GLUT: /usr/lib64/libglut.so
-- USE QT4
-- Found QGLVIEWER-qt4: /usr/include/QGLViewer
-- Found Qt4: /usr/bin/qmake (found version "4.8.6")
-- Found GUI-LIBS
-- GMP libs: /usr/lib64/libgmp.so /usr/lib64/libgmpxx.so
-- Found GMP: /usr/include
-- GMP libs: /usr/lib64/libgmp.so /usr/lib64/libgmpxx.so
-- Found CGAL
-- Could NOT find Cholmod (missing: CHOLMOD_LIBRARIES CHOLMOD_INCLUDE_DIR AMD_LIBRARY CAMD_LIBRARY COLAMD_LIBRARY CCOLAMD_LIBRARY)
-- Found OpenBlas: /usr/lib64/libblas.so
-- Found Metis: /usr/include
-- Missing dependency for LINSOLV, disabled
-- Found GL2PS
LBMFLOW is still experimental, building and running LBM engine are at your own risk!
Yade will be installed to /usr/local
-- Suffix is set to -2018-05-24.git-0e4dac9
-- LIBRARY_OUTPUT_PATH is set to lib64
-- runtimePREFIX is set to /usr/local
-- Could NOT find gts (missing: PY_gts)
-- Use embedded version of gts. Please, consider installing the corresponding package
-- Found minieigen: /usr/lib64/python2.7/site-packages/minieigen.so
-- Found Tkinter: /usr/lib64/python2.7/lib-tk/Tkinter.pyc
-- VTK version >5 is found
-- ===========================================================
-- Yade configured with following features: Odeint VTK OpenMP GTS GUI CGAL PFVFLOW TWOPHASEFLOW GL2PS LBMFLOW
-- Disabled features: LINSOLV SPH DEFORM LIQMIGRATION MASK_ARBITRARY PROFILING PotentialParticles PotentialBlocks
-- Optimized build
-- ===========================================================
-- Configuring done
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
-- Generating done[ 78%] Building CXX object CMakeFiles/yade.dir/pkg/pfv/TwoPhaseFlowEngine.cpp.o
/usr/bin/c++ -DBOOST_MATH_DISABLE_FLOAT128=1 -DNDEBUG -DYADE_ODEINT -DYADE_VTK6 -Dyade_EXPORTS -I/home/oger/Yade/trunk -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/include/python2.7 -I/usr/include/eigen3 -I/usr/include/vtk-7.0 -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/QtDesigner -I/usr/include/QtDeclarative -I/usr/include/QtScriptTools -I/usr/include/QtDBus -I/usr/include/QtXml -I/usr/include/QtSql -I/usr/include/QtOpenGL -I/usr/include/QtMultimedia -I/usr/include/QtNetwork -I/usr/include/QtXmlPatterns -I/usr/include/QtHelp -I/usr/include/QtUiTools -I/usr/include/QtTest -I/usr/include/QtScript -I/usr/include/QtSvg -I/usr/include/Qt3Support -I/usr/include/QtGui -I/usr/include/QtCore -I/usr/share/qt4/mkspecs/default -I/home/oger/Yade/build -I/home/oger/Yade/build/pkg/pfv -fPIC -O2 --param=ssp-buffer-size=4 -Wformat -Wformat-security -Werror=format-security -Wall -std=c++11 -DYADE_VTK -DYADE_OPENMP -fopenmp -DYADE_GTS -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include -DQGLVIEWER_FOUND -DYADE_OPENGL -DYADE_QT4 -DYADE_CGAL -DFLOW_ENGINE -DTWOPHASEFLOW -DYADE_GL2PS -DLBM_ENGINE -fPIC -ftrack-macro-expansion=0 -save-temps -fstack-protector -DEIGEN_DONT_VECTORIZE -DEIGEN_DONT_ALIGN -DEIGEN_DISABLE_UNALIGNED_ARRAY_ASSERT -DCGAL_DISABLE_ROUNDING_MATH_CHECK -frounding-math -o CMakeFiles/yade.dir/pkg/pfv/TwoPhaseFlowEngine.cpp.o -c /home/oger/Yade/trunk/pkg/pfv/TwoPhaseFlowEngine.cpp
^
In file included from /home/oger/Yade/trunk/pkg/pfv/TwoPhaseFlowEngine.cpp:11:0:
/home/oger/Yade/trunk/pkg/pfv/TwoPhaseFlowEngine.hpp: In constructor ‘PhaseCluster::PhaseCluster(PhaseCluster::Tesselation&)’:
/home/oger/Yade/trunk/pkg/pfv/TwoPhaseFlowEngine.hpp:156:59: error: ‘LC’ was not declared in this scope
PhaseCluster (Tesselation& t) : PhaseCluster() {tes=&t; LC=NULL; ex=NULL; if (not tes) LOG_WARN("invalid initialization");}
^
/home/oger/Yade/trunk/pkg/pfv/TwoPhaseFlowEngine.hpp:156:70: error: ‘ex’ was not declared in this scope
PhaseCluster (Tesselation& t) : PhaseCluster() {tes=&t; LC=NULL; ex=NULL; if (not tes) LOG_WARN("invalid initialization");}
^
In file included from /home/oger/Yade/trunk/pkg/pfv/TwoPhaseFlowEngine.cpp:11:0:
/home/oger/Yade/trunk/pkg/pfv/TwoPhaseFlowEngine.hpp: In member function ‘void PhaseCluster::reset()’:
/home/oger/Yade/trunk/pkg/pfv/TwoPhaseFlowEngine.hpp:175:121: error: ‘resetSolver’ was not declared in this scope
void reset() {label=entryPore=-1;volume=entryRadius=interfacialArea=0; pores.clear(); interfaces.clear(); resetSolver();}
^
/home/oger/Yade/trunk/pkg/pfv/TwoPhaseFlowEngine.hpp: In member function ‘void PhaseCluster::mergeCluster(PhaseCluster&, const CellHandle&)’:
/home/oger/Yade/trunk/pkg/pfv/TwoPhaseFlowEngine.hpp:180:10: error: ‘class PhaseCluster’ has no member named ‘resetSolver’
this->resetSolver();
^
/home/oger/Yade/trunk/pkg/pfv/TwoPhaseFlowEngine.hpp: In constructor ‘PhaseCluster::PhaseCluster()’:
/home/oger/Yade/trunk/pkg/pfv/TwoPhaseFlowEngine.hpp:211:113: error: class ‘PhaseCluster’ does not have any field named ‘LC’
YADE_CLASS_BASE_DOC_ATTRS_INIT_CTOR_PY(PhaseCluster,Serializable,"Preliminary.",
^
/home/oger/Yade/trunk/pkg/pfv/TwoPhaseFlowEngine.hpp:211:126: error: class ‘PhaseCluster’ does not have any field named ‘ex’
YADE_CLASS_BASE_DOC_ATTRS_INIT_CTOR_PY(PhaseCluster,Serializable,"Preliminary.",
^
In file included from /home/oger/Yade/trunk/pkg/pfv/TwoPhaseFlowEngine.cpp:11:0:
/home/oger/Yade/trunk/pkg/pfv/TwoPhaseFlowEngine.hpp:211:139: error: class ‘PhaseCluster’ does not have any field named ‘pComC’
YADE_CLASS_BASE_DOC_ATTRS_INIT_CTOR_PY(PhaseCluster,Serializable,"Preliminary.",
^
/home/oger/Yade/trunk/pkg/pfv/TwoPhaseFlowEngine.hpp:211:146: error: ‘comC’ was not declared in this scope
YADE_CLASS_BASE_DOC_ATTRS_INIT_CTOR_PY(PhaseCluster,Serializable,"Preliminary.",
^
/home/oger/Yade/trunk/pkg/pfv/TwoPhaseFlowEngine.hpp:211:154: error: class ‘PhaseCluster’ does not have any field named ‘pLC’
YADE_CLASS_BASE_DOC_ATTRS_INIT_CTOR_PY(PhaseCluster,Serializable,"Preliminary.",
^
/home/oger/Yade/trunk/pkg/pfv/TwoPhaseFlowEngine.hpp:211:159: error: ‘LC’ was not declared in this scope
YADE_CLASS_BASE_DOC_ATTRS_INIT_CTOR_PY(PhaseCluster,Serializable,"Preliminary.",
^
/home/oger/Yade/trunk/pkg/pfv/TwoPhaseFlowEngine.hpp: In member function ‘virtual void PhaseCluster::pyRegisterClass(boost::python::api::object)’:
/home/oger/Yade/trunk/pkg/pfv/TwoPhaseFlowEngine.hpp:211:13845: error: ‘solvePressure’ is not a member of ‘PhaseCluster’
YADE_CLASS_BASE_DOC_ATTRS_INIT_CTOR_PY(PhaseCluster,Serializable,"Preliminary.",
/home/oger/Yade/trunk/pkg/pfv/TwoPhaseFlowEngine.cpp: At global scope:
/home/oger/Yade/trunk/pkg/pfv/TwoPhaseFlowEngine.cpp:26:34: error: no ‘void PhaseCluster::solvePressure()’ member function declared in class ‘PhaseCluster’
void PhaseCluster::solvePressure()
^
/home/oger/Yade/trunk/pkg/pfv/TwoPhaseFlowEngine.cpp: In member function ‘std::vector<int> TwoPhaseFlowEngine::clusterOutvadePore(unsigned int, unsigned int, int)’:
/home/oger/Yade/trunk/pkg/pfv/TwoPhaseFlowEngine.cpp:2760:11: error: ‘class PhaseCluster’ has no member named ‘resetSolver’
cluster->resetSolver();//reset the linear system
^
CMakeFiles/yade.dir/build.make:3497: recipe for target 'CMakeFiles/yade.dir/pkg/pfv/TwoPhaseFlowEngine.cpp.o' failed
make[2]: *** [CMakeFiles/yade.dir/pkg/pfv/TwoPhaseFlowEngine.cpp.o] Error 1
make[2]: Leaving directory '/home/oger/Yade/build'
CMakeFiles/Makefile2:172: recipe for target 'CMakeFiles/yade.dir/all' failed
make[1]: *** [CMakeFiles/yade.dir/all] Error 2
make[1]: Leaving directory '/home/oger/Yade/build'
Makefile:130: recipe for target 'all' failed
make: *** [all] Error 2
-- Build files have been written to: /home/oger/Yade/build
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