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Re: Problems with compiling DOLFIN on Redhat, Problem SOLVED

To: Discussion of DOLFIN development <dolfin-dev@xxxxxxxxxx>
From: Anders Logg <logg@xxxxxxxxx>
Date: Sat, 8 Apr 2006 20:33:52 -0500
In-reply-to: <44381EE8.9060706@gmail.com>
Mail-followup-to: Discussion of DOLFIN development <dolfin-dev@xxxxxxxxxx>
Reply-to: Discussion of DOLFIN development <dolfin-dev@xxxxxxxxxx>
User-agent: Mutt/1.5.9i
On Sat, Apr 08, 2006 at 01:36:56PM -0700, Alireza Forghani wrote:
> Hello all,
> 
> Thank you for your helps and hints
> my problem is solved
> 
> Alireza
> 
> Alireza Forghani wrote:
> >Thank you Anders,
> >Exactly, as I mentioned previously, another member of our group has 
> >installed DOLFIN.
> >DOLFIN is very popular here. :-)

I'm happy to hear that. :-)

/Anders


> >Alireza
> >
> >Anders Logg wrote:
> >>This means that someone else has installed dolfin-config system-wide
> >>on your machine (in /usr/local).
> >>
> >>Since your local directory is first in your path, I would imagine your
> >>system should choose the dolfin-config in that directory but it seems
> >>to choose the one in /usr/local/bin instead.
> >>
> >>You need to do one of the following:
> >>
> >>1. Ask the person who installed in /usr/local/ to make sure that the
> >>system-wide DOLFIN is correctly installed. Then you don't need to
> >>install it locally yourself. Just do make demo (and forget about the
> >>make, make install).
> >>
> >>2. Ask the person who installed in /usr/local/ to uninstall.
> >>
> >>3. Remove /usr/local/bin from your PATH.
> >>
> >>4. Edit the Makefile for the demo you compile so it contains the full
> >>path to dolfin-config.
> >>
> >>etc etc...
> >>
> >>This all comes down to one thing... You need to get along with the
> >>other people that have DOLFIN installed in various places on your
> >>system and I can't help you with that... :-)
> >>
> >>/Anders
> >>
> >>
> >>On Sat, Apr 08, 2006 at 02:58:00AM -0700, Alireza Forghani wrote:
> >>  
> >>>   [alireza@master dolfin-0.6.1]$ which dolfin-config
> >>>   /usr/local/bin/dolfin-config
> >>>
> >>>   Since I installed Dolfin on Local directory, It seems to be wrong and 
> >>>   it
> >>>   should be ran from:
> >>>
> >>> data/alireza/dolfin0.6.1/local/bin
> >>>
> >>> Alireza
> >>>
> >>>   Garth N. Wells wrote:
> >>>
> >>> Try
> >>>  ->which dolfin-config
> >>>
> >>> Garth
> >>>
> >>> On Sat, 2006-04-08 at 01:54 -0700, Alireza Forghani wrote:
> >>>
> >>>
> >>> Hi Anders,
> >>>
> >>> Thats right when I run dolfin-config --cflags from /src/config it 
> >>> returns:
> >>>
> >>> -I/data/alireza/dolfin-0.6.1/local/include -I../../src/kernel/common
> >>> -I../../src/kernel/fem -I../../src/kernel/form
> >>> -I../../src/kernel/function -I../../src/kernel/io -I../../src/kernel/la
> >>> -I../../src/kernel/main -I../../src/kernel/math -I../../src/kernel/mesh
> >>> -I../../src/kernel/nls -I../../src/kernel/ode -I../../src/kernel/pde
> >>> -I../../src/kernel/quadrature -I../../src/kernel/parameter
> >>> -I../../src/kernel/log -I/data/alireza/petsc-2.3.1-p11
> >>> -I/data/alireza/petsc-2.3.1-p11/bmake/linux-gnu-c-real-debug
> >>> -I/data/alireza/petsc-2.3.1-p11/include
> >>> -I/data/alireza/petsc-2.3.1-p11/externalpackages/mpich2-1.0.3/linux-gnu-c-real-debug/include
> >>> -I/usr/local/mpich/default/include -I/usr/include/libxml2
> >>> -I../../src/modules/elasticity -I../../src/modules/elasticity-updated
> >>> -I../../src/modules/convdiff -I../../src/modules/navierstokes
> >>> -I../../src/modules/poisson -I../../src/modules/stokes
> >>> -I../../src/modules/heat -I../../src/kernel/common
> >>> -I../../src/kernel/fem -I../../src/kernel/form
> >>> -I../../src/kernel/function -I../../src/kernel/io -I../../src/kernel/la
> >>> -I../../src/kernel/main -I../../src/kernel/math -I../../src/kernel/mesh
> >>> -I../../src/kernel/nls -I../../src/kernel/ode -I../../src/kernel/pde
> >>> -I../../src/kernel/quadrature -I../../src/kernel/parameter
> >>> -I../../src/kernel/log -I/data/alireza/petsc-2.3.1-p11
> >>> -I/data/alireza/petsc-2.3.1-p11/bmake/linux-gnu-c-real-debug
> >>> -I/data/alireza/petsc-2.3.1-p11/include
> >>> -I/data/alireza/petsc-2.3.1-p11/externalpackages/mpich2-1.0.3/linux-gnu-c-real-debug/include
> >>> -I/usr/local/mpich/default/include -I/usr/include/libxml2
> >>> -I../../src/modules/
> >>>
> >>> which is right and when I do from another folder:
> >>>
> >>> -I/usr/local/include -I../../src/kernel/common -I../../src/kernel/fem
> >>> -I../../src/kernel/form -I../../src/kernel/function
> >>> -I../../src/kernel/io -I../../src/kernel/la -I../../src/kernel/main
> >>> -I../../src/kernel/math -I../../src/kernel/mesh -I../../src/kernel/nls
> >>> -I../../src/kernel/ode -I../../src/kernel/pde
> >>> -I../../src/kernel/quadrature -I../../src/kernel/parameter
> >>> -I../../src/kernel/log -I/data/daan/FeNics/petsc-2.3.1-p2
> >>> -I/data/daan/FeNics/petsc-2.3.1-p2/bmake/linux-gnu-intel
> >>> -I/data/daan/FeNics/petsc-2.3.1-p2/include
> >>> -I/data/daan/FeNics/petsc-2.3.1-p2/include/mpiuni
> >>> -I/usr/local/mpich/default/include -I/usr/include/libxml2
> >>> -I../../src/modules/elasticity -I../../src/modules/elasticity-updated
> >>> -I../../src/modules/convdiff -I../../src/modules/navierstokes
> >>> -I../../src/modules/poisson -I../../src/modules/stokes
> >>> -I../../src/modules/heat -I../../src/kernel/common
> >>> -I../../src/kernel/fem -I../../src/kernel/form
> >>> -I../../src/kernel/function -I../../src/kernel/io -I../../src/kernel/la
> >>> -I../../src/kernel/main -I../../src/kernel/math -I../../src/kernel/mesh
> >>> -I../../src/kernel/nls -I../../src/kernel/ode -I../../src/kernel/pde
> >>> -I../../src/kernel/quadrature -I../../src/kernel/parameter
> >>> -I../../src/kernel/log -I/data/daan/FeNics/petsc-2.3.1-p2
> >>> -I/data/daan/FeNics/petsc-2.3.1-p2/bmake/linux-gnu-intel
> >>> -I/data/daan/FeNics/petsc-2.3.1-p2/include
> >>> -I/data/daan/FeNics/petsc-2.3.1-p2/include/mpiuni
> >>> -I/usr/local/mpich/default/include -I/usr/include/libxml2
> >>> -I../../src/modules/
> >>>
> >>> Which is daan!!
> >>>
> >>> echo $PATH returns:
> >>>
> >>> [alireza@master src]$ echo $PATH
> >>> data/alireza/dolfin0.6.1/local/bin:/opt/intel/intel_idb_80/bin:/opt/intel/intel_fc_80/bin:/opt/intel/intel_cc_80/bin:/usr/local/bin:/bin:/usr/bin:/usr/X11R6/bin:/usr/local/aspen/bin:/usr/local/mpich/default/bin:/usr/local/openpbs/bin:/opt/compro/bin:/data/alireza/bin
> >>>
> >>> dolfin-config is in the first directory:
> >>> data/alireza/dolfin0.6.1/local/bin
> >>>
> >>>
> >>> and when I did dolfin-config --cflags from /src/config from 
> >>> data/alireza/dolfin0.6.1/local/bin
> >>>  it returns:
> >>> [alireza@master bin]$ ./dolfin-config --cflags
> >>> -I/data/alireza/dolfin-0.6.1/local/include -I../../src/kernel/common 
> >>> -I../../src/kernel/fem -I../../src/kernel/form 
> >>> -I../../src/kernel/function -I../../src/kernel/io -I../../src/kernel/la 
> >>> -I../../src/kernel/main -I../../src/kernel/math -I../../src/kernel/mesh 
> >>> -I../../src/kernel/nls -I../../src/kernel/ode -I../../src/kernel/pde 
> >>> -I../../src/kernel/quadrature -I../../src/kernel/parameter 
> >>> -I../../src/kernel/log -I/data/alireza/petsc-2.3.1-p11 
> >>> -I/data/alireza/petsc-2.3.1-p11/bmake/linux-gnu-c-real-debug 
> >>> -I/data/alireza/petsc-2.3.1-p11/include 
> >>> -I/data/alireza/petsc-2.3.1-p11/externalpackages/mpich2-1.0.3/linux-gnu-c-real-debug/include -I/usr/local/mpich/default/include -I/usr/include/libxml2 -I../../src/modules/elasticity -I../../src/modules/elasticity-updated -I../../src/modules/convdiff -I../../src/modules/navierstokes -I../../src/modules/poisson -I../../src/modules/stokes -I../../src/modules/heat -I../../src/kernel/common -I../../src/kernel/fem -I../../src/kernel/form -I../../
> >>>
> >>>
> >>>
> >>>  s
> >>>
> >>>
> >>> rc/kernel/function -I../../src/kernel/io -I../../src/kernel/la 
> >>> -I../../src/kernel/main -I../../src/kernel/math -I../../src/kernel/mesh 
> >>> -I../../src/kernel/nls -I../../src/kernel/ode -I../../src/kernel/pde 
> >>> -I../../src/kernel/quadrature -I../../src/kernel/parameter 
> >>> -I../../src/kernel/log -I/data/alireza/petsc-2.3.1-p11 
> >>> -I/data/alireza/petsc-2.3.1-p11/bmake/linux-gnu-c-real-debug 
> >>> -I/data/alireza/petsc-2.3.1-p11/include 
> >>> -I/data/alireza/petsc-2.3.1-p11/externalpackages/mpich2-1.0.3/linux-gnu-c-real-debug/include -I/usr/local/mpich/default/include -I/usr/include/libxml2 -I../../src/modules/
> >>>
> >>> which seems right
> >>> May be it is runs Daan's DOLFIN instead of mine!!!
> >>>
> >>>
> >>> Alireza
> >>>
> >>>
> >>>
> >>>
> >>>
> >>>
> >>>
> >>> Anders Logg wrote:
> >>>
> >>> That looks right. It says alireza and not daan.
> >>>
> >>> Then I would be *very* surprised if dolfin-config is not correct also.
> >>>
> >>> Check the dolfin-config (in the same directory). It should contain the
> >>> correct paths.
> >>>
> >>> Then runnin dolfin-config --cflags must also return the correct path.
> >>> Go to src/config and do
> >>>
> >>>     ./dolfin-config --cflags
> >>>
> >>> I'd be very surprised if it doesn't return the correct path.
> >>>
> >>> Then go to another directory and do
> >>>
> >>>     ./dolfin-config --cflags
> >>>
> >>> If that does not also return the correct path, then the dolfin-config
> >>> in your PATH must be the wrong dolfin-config.
> >>>
> >>> Maybe dolfin-config has been installed somewhere else in your PATH?
> >>>
> >>> Type
> >>>
> >>>     echo $PATH
> >>>
> >>> then check if dolfin-config is in any of the directories.
> >>>
> >>> /Anders
> >>>
> >>>
> >>>
> >>> _______________________________________________
> >>> DOLFIN-dev mailing list
> >>> [1]DOLFIN-dev@xxxxxxxxxx
> >>> [2]http://www.fenics.org/cgi-bin/mailman/listinfo/dolfin-dev
> >>>
> >>>
> >>>
> >>> _______________________________________________
> >>> DOLFIN-dev mailing list
> >>> [3]DOLFIN-dev@xxxxxxxxxx
> >>> [4]http://www.fenics.org/cgi-bin/mailman/listinfo/dolfin-dev
> >>>
> >>>
> >>>
> >>>References
> >>>
> >>>   Visible links
> >>>   1. mailto:DOLFIN-dev@xxxxxxxxxx
> >>>   2. http://www.fenics.org/cgi-bin/mailman/listinfo/dolfin-dev
> >>>   3. mailto:DOLFIN-dev@xxxxxxxxxx
> >>>   4. http://www.fenics.org/cgi-bin/mailman/listinfo/dolfin-dev
> >>>    
> >>
> >>  
> >>>_______________________________________________
> >>>DOLFIN-dev mailing list
> >>>DOLFIN-dev@xxxxxxxxxx
> >>>http://www.fenics.org/cgi-bin/mailman/listinfo/dolfin-dev
> >>>    
> >>
> >>
> >>  
> >
> >------------------------------------------------------------------------
> >
> >_______________________________________________
> >DOLFIN-dev mailing list
> >DOLFIN-dev@xxxxxxxxxx
> >http://www.fenics.org/cgi-bin/mailman/listinfo/dolfin-dev
> >  
> 
> 
> 
> _______________________________________________
> DOLFIN-dev mailing list
> DOLFIN-dev@xxxxxxxxxx
> http://www.fenics.org/cgi-bin/mailman/listinfo/dolfin-dev
> 

-- 
Anders Logg
Research Assistant Professor
Toyota Technological Institute at Chicago
http://www.tti-c.org/logg/
References

Re: Problems with compiling DOLFIN on Redhat
From: Alireza Forghani, 2006-04-08
Re: Problems with compiling DOLFIN on Redhat
From: Garth N. Wells, 2006-04-08
Re: Problems with compiling DOLFIN on Redhat
From: Alireza Forghani, 2006-04-08
Re: Problems with compiling DOLFIN on Redhat
From: Anders Logg, 2006-04-08
Re: Problems with compiling DOLFIN on Redhat
From: Alireza Forghani, 2006-04-08
Re: Problems with compiling DOLFIN on Redhat, Problem SOLVED
From: Alireza Forghani, 2006-04-08