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pydolfin error

To: dolfin-dev@xxxxxxxxxx
From: Gideon Simpson <grs2103@xxxxxxxxxxxx>
Date: Fri, 15 Feb 2008 20:18:20 -0500
Delivered-to: dolfin-dev@xxxxxxxxxx

having pulled the latest repositories of everything, i'm getting thefollowing error when it comes time for pydoflin:

mpicxx -DPACKAGE_NAME=\"DOLFIN\" -DPACKAGE_TARNAME=\"dolfin\" -DPACKAGE_VERSION=\"0.7.1\" "-DPACKAGE_STRING=\"DOLFIN 0.7.1\"" -DPACKAGE_BUGREPORT=\"http://www.fenics.org/bugzilla/\"; -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_DLFCN_H=1 -DHAVE_BOOST= -DHAVE_UMFPACK_H=1 -I.-I/System/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I../../src/kernel/common -I../../src/kernel/elements -I../../src/kernel/fem -I../../src/kernel/function -I../../src/kernel/graph -I../../src/kernel/io -I../../src/kernel/la -I../../src/kernel/main -I../../src/kernel/math -I../../src/kernel/mesh -I../../src/kernel/mf -I../../src/kernel/nls -I../../src/kernel/ode -I../../src/kernel/pde -I../../src/kernel/quadrature -I../../src/kernel/parameter -I../../src/kernel/log -I../../src/kernel/plot -I/opt/petsc-2.3.3-p8/bmake/darwin9.1.0-cxx-debug -I/opt/petsc-2.3.3-p8/include -I/opt/include -I/opt/include -I/opt/include -I/opt/slepc-2.3.3 -I/opt/slepc-2.3.3/include -I/opt/include/boost-1_34_1 -I/sw/include/libxml2 -I/sw/include -I/opt/petsc-2.3.3-p8/externalpackages/UMFPACKv4.3/darwin9.1.0-cxx-debug/UMFPACK/Include -I/sw/include/glib-2.0 -I/sw/lib/glib-2.0/include -I/opt/include -I../../src/pydolfin -I/System/Library/Frameworks/Python.framework/Versions/2.5/include/python2.5 -I/opt/lib/python2.5/site-packages/numpy/core/include -DHAVE_MPI_H=1 -DMPICH_IGNORE_CXX_SEEK -DHAVE_SLEPC_H=1 -DHAVE_PETSC_H=1 -DNDEBUG -g -O2 -fno-strict-aliasing -Wall -Werror -ansi -Wno-uninitialized -MT_dolfin_la-dolfin_wrap.lo -MD -MP -MF .deps/_dolfin_la-dolfin_wrap.Tpo-c dolfin_wrap.cpp -fno-common -DPIC -o .libs/_dolfin_la-dolfin_wrap.odolfin_wrap.cpp: In function 'PyObject* _wrap_add(PyObject*,PyObject*)':

dolfin_wrap.cpp:27560: error: 'add' is not a member of 'dolfin'

dolfin_wrap.cpp: In function 'PyObject* _wrap_set__SWIG_0(PyObject*,PyObject*)':

dolfin_wrap.cpp:27624: error: 'set' is not a member of 'dolfin'

dolfin_wrap.cpp: In function 'PyObject* _wrap_set__SWIG_1(PyObject*,PyObject*)':

dolfin_wrap.cpp:27682: error: 'set' is not a member of 'dolfin'

dolfin_wrap.cpp: In function 'PyObject* _wrap_get(PyObject*,PyObject*)':

dolfin_wrap.cpp:27776: error: 'get' is not a member of 'dolfin'

dolfin_wrap.cpp: In function 'PyObject*_wrap_pAssembler_assemble__SWIG_0(PyObject*, PyObject*)':

dolfin_wrap.cpp:85644: error: 'pForm' is not a member of 'dolfin'
dolfin_wrap.cpp:85644: error: 'arg3' was not declared in this scope
dolfin_wrap.cpp:85680: error: expected type-specifier
dolfin_wrap.cpp:85680: error: expected `>'
dolfin_wrap.cpp:85680: error: expected `('
dolfin_wrap.cpp:85680: error: 'pForm' is not a member of 'dolfin'

dolfin_wrap.cpp:85680: error: expected primary-expression before '>'token

dolfin_wrap.cpp:85680: error: expected `)' before ';' token

dolfin_wrap.cpp: In function 'PyObject*_wrap_pAssembler_assemble__SWIG_1(PyObject*, PyObject*)':

dolfin_wrap.cpp:85721: error: 'pForm' is not a member of 'dolfin'
dolfin_wrap.cpp:85721: error: 'arg3' was not declared in this scope
dolfin_wrap.cpp:85753: error: expected type-specifier
dolfin_wrap.cpp:85753: error: expected `>'
dolfin_wrap.cpp:85753: error: expected `('
dolfin_wrap.cpp:85753: error: 'pForm' is not a member of 'dolfin'

dolfin_wrap.cpp:85753: error: expected primary-expression before '>'token

dolfin_wrap.cpp:85753: error: expected `)' before ';' token

dolfin_wrap.cpp: In function 'PyObject*_wrap_pAssembler_assemble__SWIG_2(PyObject*, PyObject*)':

dolfin_wrap.cpp:85789: error: 'pForm' is not a member of 'dolfin'
dolfin_wrap.cpp:85789: error: 'arg3' was not declared in this scope
dolfin_wrap.cpp:85829: error: expected type-specifier
dolfin_wrap.cpp:85829: error: expected `>'
dolfin_wrap.cpp:85829: error: expected `('
dolfin_wrap.cpp:85829: error: 'pForm' is not a member of 'dolfin'

dolfin_wrap.cpp:85829: error: expected primary-expression before '>'token

dolfin_wrap.cpp:85829: error: expected `)' before ';' token

dolfin_wrap.cpp: In function 'PyObject*_wrap_pAssembler_assemble__SWIG_3(PyObject*, PyObject*)':

dolfin_wrap.cpp:85878: error: 'pForm' is not a member of 'dolfin'
dolfin_wrap.cpp:85878: error: 'arg3' was not declared in this scope
dolfin_wrap.cpp:85914: error: expected type-specifier
dolfin_wrap.cpp:85914: error: expected `>'
dolfin_wrap.cpp:85914: error: expected `('
dolfin_wrap.cpp:85914: error: 'pForm' is not a member of 'dolfin'

dolfin_wrap.cpp:85914: error: expected primary-expression before '>'token

dolfin_wrap.cpp:85914: error: expected `)' before ';' token

dolfin_wrap.cpp: In function 'PyObject*_wrap_pAssembler_assemble__SWIG_4(PyObject*, PyObject*)':

dolfin_wrap.cpp:85958: error: 'pForm' is not a member of 'dolfin'
dolfin_wrap.cpp:85958: error: 'arg3' was not declared in this scope
dolfin_wrap.cpp:86006: error: expected type-specifier
dolfin_wrap.cpp:86006: error: expected `>'
dolfin_wrap.cpp:86006: error: expected `('
dolfin_wrap.cpp:86006: error: 'pForm' is not a member of 'dolfin'

dolfin_wrap.cpp:86006: error: expected primary-expression before '>'token

dolfin_wrap.cpp:86006: error: expected `)' before ';' token

dolfin_wrap.cpp: In function 'PyObject*_wrap_pAssembler_assemble__SWIG_5(PyObject*, PyObject*)':

dolfin_wrap.cpp:86071: error: 'pForm' is not a member of 'dolfin'
dolfin_wrap.cpp:86071: error: 'arg3' was not declared in this scope
dolfin_wrap.cpp:86115: error: expected type-specifier
dolfin_wrap.cpp:86115: error: expected `>'
dolfin_wrap.cpp:86115: error: expected `('
dolfin_wrap.cpp:86115: error: 'pForm' is not a member of 'dolfin'

dolfin_wrap.cpp:86115: error: expected primary-expression before '>'token

dolfin_wrap.cpp:86115: error: expected `)' before ';' token

dolfin_wrap.cpp: In function 'PyObject*_wrap_pAssembler_assemble__SWIG_6(PyObject*, PyObject*)':

dolfin_wrap.cpp:86174: error: 'pForm' is not a member of 'dolfin'
dolfin_wrap.cpp:86174: error: 'arg2' was not declared in this scope
dolfin_wrap.cpp:86196: error: expected type-specifier
dolfin_wrap.cpp:86196: error: expected `>'
dolfin_wrap.cpp:86196: error: expected `('
dolfin_wrap.cpp:86196: error: 'pForm' is not a member of 'dolfin'

dolfin_wrap.cpp:86196: error: expected primary-expression before '>'token

dolfin_wrap.cpp:86196: error: expected `)' before ';' token

dolfin_wrap.cpp: In function 'PyObject*_wrap_pAssembler_assemble__SWIG_7(PyObject*, PyObject*)':

dolfin_wrap.cpp:86231: error: 'pForm' is not a member of 'dolfin'
dolfin_wrap.cpp:86231: error: 'arg2' was not declared in this scope
dolfin_wrap.cpp:86257: error: expected type-specifier
dolfin_wrap.cpp:86257: error: expected `>'
dolfin_wrap.cpp:86257: error: expected `('
dolfin_wrap.cpp:86257: error: 'pForm' is not a member of 'dolfin'

dolfin_wrap.cpp:86257: error: expected primary-expression before '>'token

dolfin_wrap.cpp:86257: error: expected `)' before ';' token

dolfin_wrap.cpp: In function 'PyObject*_wrap_pAssembler_assemble__SWIG_8(PyObject*, PyObject*)':

dolfin_wrap.cpp:86300: error: 'pForm' is not a member of 'dolfin'
dolfin_wrap.cpp:86300: error: 'arg2' was not declared in this scope
dolfin_wrap.cpp:86334: error: expected type-specifier
dolfin_wrap.cpp:86334: error: expected `>'
dolfin_wrap.cpp:86334: error: expected `('
dolfin_wrap.cpp:86334: error: 'pForm' is not a member of 'dolfin'

dolfin_wrap.cpp:86334: error: expected primary-expression before '>'token

dolfin_wrap.cpp:86334: error: expected `)' before ';' token

dolfin_wrap.cpp: In function 'PyObject*_wrap_pAssembler_assemble__SWIG_9(PyObject*, PyObject*)':

dolfin_wrap.cpp:86396: error: 'pDofMapSet' is not a member of 'dolfin'
dolfin_wrap.cpp:86396: error: 'arg5' was not declared in this scope
dolfin_wrap.cpp:86466: error: expected type-specifier
dolfin_wrap.cpp:86466: error: expected `>'
dolfin_wrap.cpp:86466: error: expected `('
dolfin_wrap.cpp:86466: error: 'pDofMapSet' is not a member of 'dolfin'

dolfin_wrap.cpp:86466: error: expected primary-expression before '>'token

dolfin_wrap.cpp:86466: error: expected `)' before ';' token
dolfin_wrap.cpp:86489: error: 'pDofMapSet' is not a member of 'dolfin'
dolfin_wrap.cpp:86489: error: expected `)' before 'const'

dolfin_wrap.cpp: In function 'PyObject*_wrap_pAssembler_assemble__SWIG_10(PyObject*, PyObject*)':

dolfin_wrap.cpp:86524: error: 'pDofMapSet' is not a member of 'dolfin'
dolfin_wrap.cpp:86524: error: 'arg5' was not declared in this scope
dolfin_wrap.cpp:86590: error: expected type-specifier
dolfin_wrap.cpp:86590: error: expected `>'
dolfin_wrap.cpp:86590: error: expected `('
dolfin_wrap.cpp:86590: error: 'pDofMapSet' is not a member of 'dolfin'

dolfin_wrap.cpp:86590: error: expected primary-expression before '>'token

dolfin_wrap.cpp:86590: error: expected `)' before ';' token
dolfin_wrap.cpp:86608: error: 'pDofMapSet' is not a member of 'dolfin'
dolfin_wrap.cpp:86608: error: expected `)' before 'const'
make[3]: *** [_dolfin_la-dolfin_wrap.lo] Error 1
make[2]: *** [all] Error 2
make[1]: *** [all-recursive] Error 1
make: *** [all-recursive] Error 1

Follow ups

Re: pydolfin error
From: Ola Skavhaug, 2008-02-16