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Re: Trilinos-8.0.7

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Kent is referring to the trilinos package created by Johannes here at Simula: 
http://packages.simula.no/

The .deb package for Gutsy can be found at
http://packages.simula.no/pool/main/t/trilinos/

ilmar

Johan Hake skrev:

On Thursday 26 June 2008 17:04:07 Kent-Andre Mardal wrote:

By the way, the Gutsy packages also work on Hardy (at least on my
machine).


The gutsy package of what? Trilinos? Where do you get that from?

Johan


Kent

On Thu, 2008-06-26 at 15:49 +0100, Garth N. Wells wrote:

Johan Hake wrote:

Hello!

There have been reported some trubles with compiling trilinos.
Especially version 8.0.5. I have now downloaded 8.0.7 and compiled this
without problems, on Ubuntu Hardy.

Both with and without mpi.

Compile flags for MPI:
../configure --prefix=<install_dir> --enable-shared
--enable-pytrilinos\ --enable-pliris --enable-didasko --enable-amesos
--enable-anasazi\ --enable-default-packages --enable-galeri
--with-cflags=-fPIC\ --with-cxxflags=-fPIC --with-fflags=-fPIC
--with-ldflags=-fPIC\ --with-ccflags=-fPIC --enable-triutils
--enable-aztecoo-teuchos\ --enable-mpi --with-mpi-compilers
--with-gnumake -C

Unfortunately this didn't work for me. I get a bunch of errors.

Garth

Teuchos_wrap.o: In function `typecode_string(int)':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
rc/Teuchos_wrap.cpp:3124: multiple definition of `typecode_string(int)'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
os/shared/../src/Epetra_wrap.cpp:3877: first defined here
Teuchos_wrap.o: In function `type_match(int, int)':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
rc/Teuchos_wrap.cpp:3141: multiple definition of `type_match(int, int)'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
os/shared/../src/Epetra_wrap.cpp:3894: first defined here
Teuchos_wrap.o: In function `SWIG_TypePrettyName':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
rc/Teuchos_wrap.cpp:486: multiple definition of `PyTrilinos'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
os/shared/../src/Epetra_wrap.cpp:487: first defined here
Teuchos_wrap.o: In function `make_contiguous(PyArrayObject*, int*, int,
int)':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
rc/Teuchos_wrap.cpp:3211: multiple definition of
`make_contiguous(PyArrayObject*, int*, int, int)'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
os/shared/../src/Epetra_wrap.cpp:3964: first defined here
Teuchos_wrap.o: In function `require_native(PyArrayObject*)':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
rc/Teuchos_wrap.cpp:3278: multiple definition of
`require_native(PyArrayObject*)'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
os/shared/../src/Epetra_wrap.cpp:4031: first defined here
Teuchos_wrap.o: In function `require_contiguous(PyArrayObject*)':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
rc/Teuchos_wrap.cpp:3262: multiple definition of
`require_contiguous(PyArrayObject*)'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
os/shared/../src/Epetra_wrap.cpp:4015: first defined here
Teuchos_wrap.o: In function `require_dimensions(PyArrayObject*, int)':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
rc/Teuchos_wrap.cpp:3295: multiple definition of
`require_dimensions(PyArrayObject*, int)'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
os/shared/../src/Epetra_wrap.cpp:4048: first defined here
Teuchos_wrap.o: In function `obj_to_array_allow_conversion(_object*,
int, int*)':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
rc/Teuchos_wrap.cpp:3185: multiple definition of
`obj_to_array_allow_conversion(_object*, int, int*)'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
os/shared/../src/Epetra_wrap.cpp:3938: first defined here
Teuchos_wrap.o: In function
`obj_to_array_contiguous_allow_conversion(_object*, int, int*)':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
rc/Teuchos_wrap.cpp:3237: multiple definition of
`obj_to_array_contiguous_allow_conversion(_object*, int, int*)'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
os/shared/../src/Epetra_wrap.cpp:3990: first defined here
Teuchos_wrap.o: In function `Finalize()':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
rc/Teuchos_wrap.cpp:4341: multiple definition of `Finalize()'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
os/shared/../src/Epetra_wrap.cpp:4764: first defined here
Teuchos_wrap.o: In function `Init_Argv(_object*)':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
rc/Teuchos_wrap.cpp:4298: multiple definition of `Init_Argv(_object*)'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
os/shared/../src/Epetra_wrap.cpp:4721: first defined here
Teuchos_wrap.o: In function `require_size(PyArrayObject*, int*, int)':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
rc/Teuchos_wrap.cpp:3346: multiple definition of
`require_size(PyArrayObject*, int*, int)'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
os/shared/../src/Epetra_wrap.cpp:4099: first defined here
Teuchos_wrap.o: In function `require_dimensions_n(PyArrayObject*, int*,
int)':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
rc/Teuchos_wrap.cpp:3313: multiple definition of
`require_dimensions_n(PyArrayObject*, int*, int)'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
os/shared/../src/Epetra_wrap.cpp:4066: first defined here
Teuchos_wrap.o: In function `pytype_string(_object*)':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
rc/Teuchos_wrap.cpp:3105: multiple definition of `pytype_string(_object*)'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
os/shared/../src/Epetra_wrap.cpp:3858: first defined here
Teuchos_wrap.o: In function `obj_to_array_no_conversion(_object*, int)':
/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
rc/Teuchos_wrap.cpp:3150: multiple definition of
`obj_to_array_no_conversion(_object*, int)'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
os/shared/../src/Epetra_wrap.cpp:3903: first defined here
Teuchos_wrap.o: In function `SWIG_TypePrettyName':
/usr/local/include/openmpi/ompi/mpi/cxx/win_inln.h:118: multiple
definition of `NumPyImporter::m_singleton'
Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/epetra/s
rc/Epetra_Util.h:179: first defined here
collect2: ld returned 1 exit status
Traceback (most recent call last):
   File "./setup.py", line 172, in <module>
     ###################
   File "./setup.py", line 148, in main
     # Build the init file
   File "../util/SharedUtils.py", line 475, in buildShared
     SharedTrilinosBuilder.buildShared(self)
   File "../util/SharedUtils.py", line 330, in buildShared
     runCommand(self.linkCmd)
   File "../util/SharedUtils.py", line 97, in runCommand
     if status: raise RuntimeError, "Exit status = %d" % status
RuntimeError: Exit status = 256


Compile flags for serial:
../configure --prefix=<install_dir> --enable-shared
--enable-pytrilinos\ --enable-pliris --enable-didasko --enable-amesos
--enable-anasazi\ --enable-default-packages --enable-galeri
--with-cflags=-fPIC\ --with-cxxflags=-fPIC --with-fflags=-fPIC
--with-ldflags=-fPIC\ --with-ccflags=-fPIC --enable-triutils
--enable-aztecoo-teuchos\ --with-gnumake -C

Have fun!

Johan
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