dolfin team mailing list archive

[Johan Hake <hake@xxxxxxxxx>]

On Thursday 26 June 2008 17:04:07 Kent-Andre Mardal wrote:
> By the way, the Gutsy packages also work on Hardy (at least on my
> machine).

The gutsy package of what? Trilinos? Where do you get that from?

Johan

> Kent
>
> On Thu, 2008-06-26 at 15:49 +0100, Garth N. Wells wrote:
> > Johan Hake wrote:
> > > Hello!
> > >
> > > There have been reported some trubles with compiling trilinos.
> > > Especially version 8.0.5. I have now downloaded 8.0.7 and compiled this
> > > without problems, on Ubuntu Hardy.
> > >
> > > Both with and without mpi.
> > >
> > > Compile flags for MPI:
> > > ../configure --prefix=<install_dir> --enable-shared
> > > --enable-pytrilinos\ --enable-pliris --enable-didasko --enable-amesos
> > > --enable-anasazi\ --enable-default-packages --enable-galeri
> > > --with-cflags=-fPIC\ --with-cxxflags=-fPIC --with-fflags=-fPIC
> > > --with-ldflags=-fPIC\ --with-ccflags=-fPIC --enable-triutils
> > > --enable-aztecoo-teuchos\ --enable-mpi --with-mpi-compilers
> > > --with-gnumake -C
> >
> > Unfortunately this didn't work for me. I get a bunch of errors.
> >
> > Garth
> >
> > Teuchos_wrap.o: In function `typecode_string(int)':
> > /home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
> >rc/Teuchos_wrap.cpp:3124: multiple definition of `typecode_string(int)'
> > Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
> >os/shared/../src/Epetra_wrap.cpp:3877: first defined here
> > Teuchos_wrap.o: In function `type_match(int, int)':
> > /home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
> >rc/Teuchos_wrap.cpp:3141: multiple definition of `type_match(int, int)'
> > Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
> >os/shared/../src/Epetra_wrap.cpp:3894: first defined here
> > Teuchos_wrap.o: In function `SWIG_TypePrettyName':
> > /home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
> >rc/Teuchos_wrap.cpp:486: multiple definition of `PyTrilinos'
> > Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
> >os/shared/../src/Epetra_wrap.cpp:487: first defined here
> > Teuchos_wrap.o: In function `make_contiguous(PyArrayObject*, int*, int,
> > int)':
> > /home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
> >rc/Teuchos_wrap.cpp:3211: multiple definition of
> > `make_contiguous(PyArrayObject*, int*, int, int)'
> > Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
> >os/shared/../src/Epetra_wrap.cpp:3964: first defined here
> > Teuchos_wrap.o: In function `require_native(PyArrayObject*)':
> > /home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
> >rc/Teuchos_wrap.cpp:3278: multiple definition of
> > `require_native(PyArrayObject*)'
> > Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
> >os/shared/../src/Epetra_wrap.cpp:4031: first defined here
> > Teuchos_wrap.o: In function `require_contiguous(PyArrayObject*)':
> > /home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
> >rc/Teuchos_wrap.cpp:3262: multiple definition of
> > `require_contiguous(PyArrayObject*)'
> > Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
> >os/shared/../src/Epetra_wrap.cpp:4015: first defined here
> > Teuchos_wrap.o: In function `require_dimensions(PyArrayObject*, int)':
> > /home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
> >rc/Teuchos_wrap.cpp:3295: multiple definition of
> > `require_dimensions(PyArrayObject*, int)'
> > Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
> >os/shared/../src/Epetra_wrap.cpp:4048: first defined here
> > Teuchos_wrap.o: In function `obj_to_array_allow_conversion(_object*,
> > int, int*)':
> > /home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
> >rc/Teuchos_wrap.cpp:3185: multiple definition of
> > `obj_to_array_allow_conversion(_object*, int, int*)'
> > Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
> >os/shared/../src/Epetra_wrap.cpp:3938: first defined here
> > Teuchos_wrap.o: In function
> > `obj_to_array_contiguous_allow_conversion(_object*, int, int*)':
> > /home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
> >rc/Teuchos_wrap.cpp:3237: multiple definition of
> > `obj_to_array_contiguous_allow_conversion(_object*, int, int*)'
> > Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
> >os/shared/../src/Epetra_wrap.cpp:3990: first defined here
> > Teuchos_wrap.o: In function `Finalize()':
> > /home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
> >rc/Teuchos_wrap.cpp:4341: multiple definition of `Finalize()'
> > Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
> >os/shared/../src/Epetra_wrap.cpp:4764: first defined here
> > Teuchos_wrap.o: In function `Init_Argv(_object*)':
> > /home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
> >rc/Teuchos_wrap.cpp:4298: multiple definition of `Init_Argv(_object*)'
> > Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
> >os/shared/../src/Epetra_wrap.cpp:4721: first defined here
> > Teuchos_wrap.o: In function `require_size(PyArrayObject*, int*, int)':
> > /home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
> >rc/Teuchos_wrap.cpp:3346: multiple definition of
> > `require_size(PyArrayObject*, int*, int)'
> > Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
> >os/shared/../src/Epetra_wrap.cpp:4099: first defined here
> > Teuchos_wrap.o: In function `require_dimensions_n(PyArrayObject*, int*,
> > int)':
> > /home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
> >rc/Teuchos_wrap.cpp:3313: multiple definition of
> > `require_dimensions_n(PyArrayObject*, int*, int)'
> > Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
> >os/shared/../src/Epetra_wrap.cpp:4066: first defined here
> > Teuchos_wrap.o: In function `pytype_string(_object*)':
> > /home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
> >rc/Teuchos_wrap.cpp:3105: multiple definition of `pytype_string(_object*)'
> > Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
> >os/shared/../src/Epetra_wrap.cpp:3858: first defined here
> > Teuchos_wrap.o: In function `obj_to_array_no_conversion(_object*, int)':
> > /home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilinos/shared/../s
> >rc/Teuchos_wrap.cpp:3150: multiple definition of
> > `obj_to_array_no_conversion(_object*, int)'
> > Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/PyTrilin
> >os/shared/../src/Epetra_wrap.cpp:3903: first defined here
> > Teuchos_wrap.o: In function `SWIG_TypePrettyName':
> > /usr/local/include/openmpi/ompi/mpi/cxx/win_inln.h:118: multiple
> > definition of `NumPyImporter::m_singleton'
> > Epetra_wrap.o:/home/garth/code/libraries/trilinos-8.0.7/packages/epetra/s
> >rc/Epetra_Util.h:179: first defined here
> > collect2: ld returned 1 exit status
> > Traceback (most recent call last):
> >    File "./setup.py", line 172, in <module>
> >      ###################
> >    File "./setup.py", line 148, in main
> >      # Build the init file
> >    File "../util/SharedUtils.py", line 475, in buildShared
> >      SharedTrilinosBuilder.buildShared(self)
> >    File "../util/SharedUtils.py", line 330, in buildShared
> >      runCommand(self.linkCmd)
> >    File "../util/SharedUtils.py", line 97, in runCommand
> >      if status: raise RuntimeError, "Exit status = %d" % status
> > RuntimeError: Exit status = 256
> >
> > > Compile flags for serial:
> > > ../configure --prefix=<install_dir> --enable-shared
> > > --enable-pytrilinos\ --enable-pliris --enable-didasko --enable-amesos
> > > --enable-anasazi\ --enable-default-packages --enable-galeri
> > > --with-cflags=-fPIC\ --with-cxxflags=-fPIC --with-fflags=-fPIC
> > > --with-ldflags=-fPIC\ --with-ccflags=-fPIC --enable-triutils
> > > --enable-aztecoo-teuchos\ --with-gnumake -C
> > >
> > > Have fun!
> > >
> > > Johan
> > > _______________________________________________
> > > DOLFIN-dev mailing list
> > > DOLFIN-dev@xxxxxxxxxx
> > > http://www.fenics.org/mailman/listinfo/dolfin-dev
> >
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