dolfin team mailing list archive

[Anders Logg <logg@xxxxxxxxx>]

On Thu, Nov 11, 2010 at 08:45:39PM +0100, Andre Massing wrote:
> Den 11.11.10 18.50, skrev Anders Logg:
> >On Thu, Nov 11, 2010 at 06:34:38PM +0100, Andre Massing wrote:
> >>Den 11.11.10 17.23, skrev Johannes Ring:
> >>>On Thu, Nov 11, 2010 at 3:35 PM, Andre Massing<massing@xxxxxxxxx>   wrote:
> >>>>Den 11.11.10 15.23, skrev Johannes Ring:
> >>>>>On Thu, Nov 11, 2010 at 3:14 PM, Andre Massing<massing@xxxxxxxxx>     wrote:
> >>>>>>Den 11.11.10 15.04, skrev Johannes Ring:
> >>>>>>>On Thu, Nov 11, 2010 at 2:58 PM, Andre Massing<massing@xxxxxxxxx>
> >>>>>>>  wrote:
> >>>>>>>>Hi!
> >>>>>>>>
> >>>>>>>>I just encountered another strange error during compilation of the
> >>>>>>>>latest
> >>>>>>>>dolfin development
> >>>>>>>>version on a Mac OS X platform. I got the error
> >>>>>>>>
> >>>>>>>>Linking CXX shared library libdolfin.dylib
> >>>>>>>>[..]
> >>>>>>>>Undefined symbols:
> >>>>>>>>
> >>>>>>>>
> >>>>>>>>  "boost::program_options::validation_error::validation_error(boost::program_options::validation_error::kind_t,
> >>>>>>>>std::basic_string<char, std::char_traits<char>, std::allocator<char>
> >>>>>>>>  >
> >>>>>>>>const&, std::basic_string<char, std::char_traits<char>,
> >>>>>>>>std::allocator<char>
> >>>>>>>>>const&)", referenced from:
> >>>>>>>>Switching VERBOSE=1 reveals that libboost_program_options was not
> >>>>>>>>included
> >>>>>>>>in the list of libs to link with.
> >>>>>>>>Any clue how to fix that?
> >>>>>>>I had a similar problem a few days ago. I think it was after I did a
> >>>>>>>clean build of DOLFIN that the problem went away. Have you tried that?
> >>>>>>>
> >>>>>>>Johannes
> >>>>>>Actually I started with a clean build in the first place :)
> >>>>>Okay, could you attach your CMakeCache.txt file?
> >>>>>
> >>>>Attached.
> >>>Thanks. It looks okay so I don't really know. You could try to specify
> >>>the Boost libraries manually, like this:
> >>>
> >>>   -DBoost_PROGRAM_OPTIONS_LIBRARY:FILEPATH=/opt/local/lib/libboost_program_options-mt.dylib
> >>>
> >>>Are you sure you have the latests DOLFIN? And does it work if you
> >>>revert back to revision 5236?
> >>I have tried both, and neither one helped. I am really stuck now,
> >>since I can not compile any of my dolfin libs :(
> >Install Ubuntu Maverick on your MacBook. Not only will you escape your
> >Boost troubles but you will get algebraic multigrid, a working package
> >manager, and a free/open-source OS. ;-)
> As my last investigation showed, might run into the same trouble as
> soon as ubuntu updates cmake,
> maybe you will be saved from this because the brave Mac users hit it
> first :)  And I have to admit that I
> am very happy with my battery time, suspend and hibernate modus ;)
> and a working graphic card. (Old issue wasn't
> resolved with Maverick!)
> BTW, I just checked the changelog of cmake
> and it seems there were quite some changes in the cmake
> findBoost.cmake from 2.8.2 to 2.8.3.
> So it seems, that is really cmake related
> An concerning the last argument about petsc and amg: Fresh news from
> my *Mac OS X* , just ran NS demo:
>
> Computing tentative velocity
>   Applying boundary conditions to linear system.
>   Solving linear system of size 3874 x 3874 (PETSc Krylov solver).
>   PETSc Krylov solver (gmres, ilu) converged in 6 iterations.
> Computing pressure correction
>   Applying boundary conditions to linear system.
>   Applying boundary conditions to linear system.
>   Solving linear system of size 505 x 505 (PETSc Krylov solver).
>   PETSc Krylov solver (gmres, hypre) converged in 5 iterations.
>   PETSc Krylov solver Hypre preconditioner method: boomeramg
> Computing velocity correction
>   Applying boundary conditions to linear system.
>   Solving linear system of size 3874 x 3874 (PETSc Krylov solver).
>   PETSc Krylov solver (gmres, ilu) converged in 6 iterations.
> Time-stepping
> [=======================================================] 100.0%
>
> So finally I got openmpi running with fortran and have a full petsc
> installation on my Mac. :-D

Great work! But I don't understand why you want to go through all that
pain. I need something that just works (=Ubuntu)! :-)

--
Anders