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Message #08762
Re: [Question #240619]: Collision detection and dense sphere packing problem with compiled yade-daily
Question #240619 on Yade changed:
https://answers.launchpad.net/yade/+question/240619
Status: Answered => Open
Ehsan Izadi is still having a problem:
I guess running same code in two different versions and getting
different feedback, is a strange and there should be a problem with my
compiled yade-daily.
I compiled yade-daily again on my Ubuntu 13.10 and reported all the
responses I got below (sorry if it is too long!):
----------------------------------------------------------------------------------------------------------------------------------------------------------------------
ehsan@ehsan-ugent:~/yade-daily/build$ cmake -DINSTALL_PREFIX=~/yade-daily/build/ ~/yade-daily/trunk/
-- The C compiler identification is GNU 4.8.1
-- The CXX compiler identification is GNU 4.8.1
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Found PythonLibs: /usr/lib/x86_64-linux-gnu/libpython2.7.so (found version "2.7.5+")
-- Found PythonInterp: /usr/bin/python (found version "2.7.5")
-- Try OpenMP C flag = [-fopenmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Success
-- Try OpenMP CXX flag = [-fopenmp]
-- Performing Test OpenMP_FLAG_DETECTED
-- Performing Test OpenMP_FLAG_DETECTED - Success
-- Found OpenMP: -fopenmp
-- Looking for Q_WS_X11
-- Looking for Q_WS_X11 - found
-- Looking for Q_WS_WIN
-- Looking for Q_WS_WIN - not found
-- Looking for Q_WS_QWS
-- Looking for Q_WS_QWS - not found
-- Looking for Q_WS_MAC
-- Looking for Q_WS_MAC - not found
-- Found Qt4: /usr/bin/qmake (found version "4.8.4")
-- The imported target "vtkParseJava" references the file
"/usr/bin/vtkParseJava"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/vtk-5.8/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkWrapJava" references the file
"/usr/bin/vtkWrapJava"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/vtk-5.8/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkCommonJava" references the file
"/usr/lib/jni/libvtkCommonJava.so.5.8.0"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/vtk-5.8/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkFilteringJava" references the file
"/usr/lib/jni/libvtkFilteringJava.so.5.8.0"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/vtk-5.8/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkImagingJava" references the file
"/usr/lib/jni/libvtkImagingJava.so.5.8.0"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/vtk-5.8/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkGraphicsJava" references the file
"/usr/lib/jni/libvtkGraphicsJava.so.5.8.0"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/vtk-5.8/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkGenericFilteringJava" references the file
"/usr/lib/jni/libvtkGenericFilteringJava.so.5.8.0"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/vtk-5.8/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkIOJava" references the file
"/usr/lib/jni/libvtkIOJava.so.5.8.0"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/vtk-5.8/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkRenderingJava" references the file
"/usr/lib/jni/libvtkRenderingJava.so.5.8.0"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/vtk-5.8/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkVolumeRenderingJava" references the file
"/usr/lib/jni/libvtkVolumeRenderingJava.so.5.8.0"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/vtk-5.8/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkHybridJava" references the file
"/usr/lib/jni/libvtkHybridJava.so.5.8.0"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/vtk-5.8/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkWidgetsJava" references the file
"/usr/lib/jni/libvtkWidgetsJava.so.5.8.0"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/vtk-5.8/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkParallelJava" references the file
"/usr/lib/jni/libvtkParallelJava.so.5.8.0"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/vtk-5.8/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkInfovisJava" references the file
"/usr/lib/jni/libvtkInfovisJava.so.5.8.0"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/vtk-5.8/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkGeovisJava" references the file
"/usr/lib/jni/libvtkGeovisJava.so.5.8.0"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/vtk-5.8/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkViewsJava" references the file
"/usr/lib/jni/libvtkViewsJava.so.5.8.0"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/vtk-5.8/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkQtChart" references the file
"/usr/lib/libvtkQtChart.so.5.8.0"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/vtk-5.8/VTKTargets.cmake"
but not all the files it references.
-- The imported target "QVTK" references the file
"/usr/lib/libQVTK.so.5.8.0"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/vtk-5.8/VTKTargets.cmake"
but not all the files it references.
-- The imported target "vtkChartsJava" references the file
"/usr/lib/jni/libvtkChartsJava.so.5.8.0"
but this file does not exist. Possible reasons include:
* The file was deleted, renamed, or moved to another location.
* An install or uninstall procedure did not complete successfully.
* The installation package was faulty and contained
"/usr/lib/vtk-5.8/VTKTargets.cmake"
but not all the files it references.
-- Found PkgConfig: /usr/bin/pkg-config (found version "0.26")
-- Version is set to 2013-12-10.git-2e0c7cd
-- Looking for XOpenDisplay in /usr/lib/x86_64-linux-gnu/libX11.so;/usr/lib/x86_64-linux-gnu/libXext.so
-- Looking for XOpenDisplay in /usr/lib/x86_64-linux-gnu/libX11.so;/usr/lib/x86_64-linux-gnu/libXext.so - found
-- Looking for gethostbyname
-- Looking for gethostbyname - found
-- Looking for connect
-- Looking for connect - found
-- Looking for remove
-- Looking for remove - found
-- Looking for shmat
-- Looking for shmat - found
-- Looking for IceConnectionNumber in ICE
-- Looking for IceConnectionNumber in ICE - found
-- Found X11: /usr/lib/x86_64-linux-gnu/libX11.so
-- Found OpenGL: /usr/lib/x86_64-linux-gnu/libGL.so
-- GTS using gts-config /usr/bin/gts-config
-- Using GTS from /usr
-- Found GL2PS: /usr/lib/libgl2ps.so
-- Found CGAL: /usr/include/CGAL, /usr/lib/libCGAL.so
-- Found NumPy: version "1.7.1" /usr/lib/python2.7/dist-packages/numpy/core/include
-- Found Loki: /usr/include
-- GCC Version >= 4.8. Adding -ftrack-macro-expansion=0 and -save-temps
-- Boost version: 1.53.0
-- Found the following Boost libraries:
-- python
-- thread
-- date_time
-- filesystem
-- iostreams
-- regex
-- serialization
-- system
-- Boost_VERSION: 105300
-- Boost_LIB_VERSION: 1_53
-- Boost_INCLUDE_DIRS: /usr/include
-- Boost_LIBRARIES: /usr/lib/x86_64-linux-gnu/libboost_python.so/usr/lib/x86_64-linux-gnu/libboost_thread.so/usr/lib/x86_64-linux-gnu/libboost_date_time.so/usr/lib/x86_64-linux-gnu/libboost_filesystem.so/usr/lib/x86_64-linux-gnu/libboost_iostreams.so/usr/lib/x86_64-linux-gnu/libboost_regex.so/usr/lib/x86_64-linux-gnu/libboost_serialization.so/usr/lib/x86_64-linux-gnu/libboost_system.so/usr/lib/x86_64-linux-gnu/libpthread.so
-- Found Eigen3: /usr/include/eigen3 (Required is at least version "2.91.0")
-- Found BZip2: /usr/lib/x86_64-linux-gnu/libbz2.so (found version "1.0.6")
-- Looking for BZ2_bzCompressInit in /usr/lib/x86_64-linux-gnu/libbz2.so
-- Looking for BZ2_bzCompressInit in /usr/lib/x86_64-linux-gnu/libbz2.so - found
-- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.8")
-- Found Eigen3
-- Found VTK
-- Found OpenMP
-- GTS using gts-config /usr/bin/gts-config
-- Using GTS from /usr
-- checking for one of the modules 'glib-2.0'
-- Found GLib2: glib-2.0 /usr/include/glib-2.0;/usr/lib/x86_64-linux-gnu/glib-2.0/include
-- Looking for include file glib/gregex.h
-- Looking for include file glib/gregex.h - not found
-- Found GTS
-- Found Qt4: /usr/bin/qmake (found version "4.8.4")
-- Found GLUT: /usr/lib/x86_64-linux-gnu/libglut.so
-- Found QGLViewer: /usr/lib/x86_64-linux-gnu/libQGLViewer.so
-- Found GUI-LIBS
-- GMP libs: /usr/lib/x86_64-linux-gnu/libgmp.so /usr/lib/x86_64-linux-gnu/libgmpxx.so
-- Found GMP: /usr/include/x86_64-linux-gnu
-- GMP libs: /usr/lib/x86_64-linux-gnu/libgmp.so /usr/lib/x86_64-linux-gnu/libgmpxx.so
-- Found CGAL
-- Found Cholmod: /usr/lib/libcholmod.so
-- Found OpenBlas: /usr/lib/openblas-base/libopenblas.so
-- Found Metis: /usr/include
-- Found Cholmod
-- Found OpenBlas
-- Found Metis
-- Found GL2PS
Yade will be installed to /home/ehsan/yade-daily/build
-- Suffix is set to -2013-12-10.git-2e0c7cd
-- LIBRARY_OUTPUT_PATH is set to lib/x86_64-linux-gnu
-- runtimePREFIX is set to /home/ehsan/yade-daily/build
-- Found gts: /usr/lib/python2.7/dist-packages/gts
-- Use system gts version
-- Found minieigen: /usr/lib/python2.7/dist-packages/minieigen.so
-- Use system minieigen version
-- Found Tkinter: /usr/lib/python2.7/lib-tk/Tkinter.py
-- ===========================================================
-- Yade configured with following features: Eigen3 VTK OpenMP GTS GUI CGAL PFVflow LinSolv GL2PS
-- Disabled features:
-- Optimized build
-- ===========================================================
-- Configuring done
-- Generating done
-- Build files have been written to: /home/ehsan/yade-daily/build
ehsan@ehsan-ugent:~/yade-daily/build$ make
[ 0%] Generating qt4/moc_OpenGLManager.cxx
[ 1%] Generating qt4/moc_GLViewer.cxx
Scanning dependencies of target _GLViewer
[ 2%] Building CXX object gui/CMakeFiles/_GLViewer.dir/qt4/GLViewer.cpp.o
[ 2%] Building CXX object gui/CMakeFiles/_GLViewer.dir/qt4/_GLViewer.cpp.o
[ 3%] Building CXX object gui/CMakeFiles/_GLViewer.dir/qt4/OpenGLManager.cpp.o
[ 4%] Building CXX object gui/CMakeFiles/_GLViewer.dir/qt4/GLViewerDisplay.cpp.o
[ 4%] Building CXX object gui/CMakeFiles/_GLViewer.dir/qt4/GLViewerMouse.cpp.o
[ 5%] Building CXX object gui/CMakeFiles/_GLViewer.dir/qt4/moc_GLViewer.cxx.o
[ 5%] Building CXX object gui/CMakeFiles/_GLViewer.dir/qt4/moc_OpenGLManager.cxx.o
Linking CXX shared library lib/x86_64-linux-gnu/_GLViewer.so
[ 5%] Built target _GLViewer
Scanning dependencies of target yade
[ 5%] Building CXX object CMakeFiles/yade.dir/core/ThreadWorker.cpp.o
[ 6%] Building CXX object CMakeFiles/yade.dir/core/BodyContainer.cpp.o
[ 7%] Building CXX object CMakeFiles/yade.dir/core/Interaction.cpp.o
[ 7%] Building CXX object CMakeFiles/yade.dir/core/State.cpp.o
[ 8%] Building CXX object CMakeFiles/yade.dir/core/FileGenerator.cpp.o
[ 8%] Building CXX object CMakeFiles/yade.dir/core/TimeStepper.cpp.o
[ 9%] Building CXX object CMakeFiles/yade.dir/core/Shape.cpp.o
[ 10%] Building CXX object CMakeFiles/yade.dir/core/Cell.cpp.o
[ 10%] Building CXX object CMakeFiles/yade.dir/core/ThreadRunner.cpp.o
[ 11%] Building CXX object CMakeFiles/yade.dir/core/Bound.cpp.o
[ 11%] Building CXX object CMakeFiles/yade.dir/core/Body.cpp.o
[ 12%] Building CXX object CMakeFiles/yade.dir/core/Clump.cpp.o
[ 12%] Building CXX object CMakeFiles/yade.dir/core/Scene.cpp.o
[ 13%] Building CXX object CMakeFiles/yade.dir/core/InteractionContainer.cpp.o
[ 14%] Building CXX object CMakeFiles/yade.dir/core/Dispatcher.cpp.o
[ 14%] Building CXX object CMakeFiles/yade.dir/core/Engine.cpp.o
[ 15%] Building CXX object CMakeFiles/yade.dir/core/PartialEngine.cpp.o
[ 15%] Building CXX object CMakeFiles/yade.dir/core/corePlugins.cpp.o
[ 16%] Building CXX object CMakeFiles/yade.dir/core/Material.cpp.o
[ 16%] Building CXX object CMakeFiles/yade.dir/core/EnergyTracker.cpp.o
[ 17%] Building CXX object CMakeFiles/yade.dir/core/Omega.cpp.o
[ 18%] Building CXX object CMakeFiles/yade.dir/core/FrontEnd.cpp.o
[ 18%] Building CXX object CMakeFiles/yade.dir/core/SimulationFlow.cpp.o
[ 19%] Building CXX object CMakeFiles/yade.dir/pkg/dem/KinemCTDEngine.cpp.o
[ 19%] Building CXX object CMakeFiles/yade.dir/pkg/dem/CapillaryStressRecorder.cpp.o
[ 20%] Building CXX object CMakeFiles/yade.dir/pkg/dem/DemXDofGeom.cpp.o
[ 21%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Law2_ScGeom_CapillaryPhys_Capillarity.cpp.o
[ 21%] Building CXX object CMakeFiles/yade.dir/pkg/dem/SnapshotEngine.cpp.o
[ 22%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Polyhedra_splitter.cpp.o
[ 22%] Building CXX object CMakeFiles/yade.dir/pkg/dem/FacetTopologyAnalyzer.cpp.o
[ 23%] Building CXX object CMakeFiles/yade.dir/pkg/dem/L3Geom.cpp.o
[ 23%] Building CXX object CMakeFiles/yade.dir/pkg/dem/SampleCapillaryPressureEngine.cpp.o
[ 24%] Building CXX object CMakeFiles/yade.dir/pkg/dem/InelastCohFrictPhys.cpp.o
[ 25%] Building CXX object CMakeFiles/yade.dir/pkg/dem/CapillaryPhys.cpp.o
[ 25%] Building CXX object CMakeFiles/yade.dir/pkg/dem/FrictPhys.cpp.o
[ 26%] Building CXX object CMakeFiles/yade.dir/pkg/dem/TriaxialStateRecorder.cpp.o
[ 26%] Building CXX object CMakeFiles/yade.dir/pkg/dem/ConcretePM.cpp.o
^[O1;5R[ 27%] Building CXX object CMakeFiles/yade.dir/pkg/dem/TesselationWrapper.cpp.o
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1728:0,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:15,
from /home/ehsan/yade-daily/build/yade/lib/pyutil/numpy_boost.hpp:40,
from /home/ehsan/yade-daily/build/yade/lib/pyutil/numpy.hpp:3,
from /home/ehsan/yade-daily/trunk/pkg/dem/TesselationWrapper.cpp:11:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_deprecated_api.h:11:2: warning: #warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION"
^
[ 27%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Ig2_Sphere_Sphere_ScGeom.cpp.o
[ 28%] Building CXX object CMakeFiles/yade.dir/pkg/dem/HertzMindlin.cpp.o
[ 29%] Building CXX object CMakeFiles/yade.dir/pkg/dem/TriaxialTest.cpp.o
[ 29%] Building CXX object CMakeFiles/yade.dir/pkg/dem/NormalInelasticityLaw.cpp.o
[ 30%] Building CXX object CMakeFiles/yade.dir/pkg/dem/ScGeom.cpp.o
[ 30%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Ip2_CohFrictMat_CohFrictMat_CohFrictPhys.cpp.o
[ 31%] Building CXX object CMakeFiles/yade.dir/pkg/dem/ViscoelasticCapillarPM.cpp.o
[ 31%] Building CXX object CMakeFiles/yade.dir/pkg/dem/SimpleShear.cpp.o
[ 32%] Building CXX object CMakeFiles/yade.dir/pkg/dem/TriaxialCompressionEngine.cpp.o
[ 33%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Polyhedra.cpp.o
[ 33%] Building CXX object CMakeFiles/yade.dir/pkg/dem/InelastCohFrictMat.cpp.o
[ 34%] Building CXX object CMakeFiles/yade.dir/pkg/dem/CohFrictPhys.cpp.o
[ 34%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Ig2_Facet_Sphere_ScGeom.cpp.o
[ 35%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Ip2_FrictMat_FrictMat_FrictPhys.cpp.o
[ 36%] Building CXX object CMakeFiles/yade.dir/pkg/dem/KinemSimpleShearBox.cpp.o
[ 36%] Building CXX object CMakeFiles/yade.dir/pkg/dem/NewtonIntegrator.cpp.o
[ 37%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Ip2_FrictMat_FrictMat_MindlinCapillaryPhys.cpp.o
[ 37%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Ig2_Box_Sphere_ScGeom.cpp.o
[ 38%] Building CXX object CMakeFiles/yade.dir/pkg/dem/KinemCNLEngine.cpp.o
[ 38%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Tetra.cpp.o
[ 39%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Law2_ScGeom6D_InelastCohFrictPhys_CohesionMoment.cpp.o
[ 40%] Building CXX object CMakeFiles/yade.dir/pkg/dem/NormalInelasticMat.cpp.o
[ 40%] Building CXX object CMakeFiles/yade.dir/pkg/dem/KinemCNDEngine.cpp.o
[ 41%] Building CXX object CMakeFiles/yade.dir/pkg/dem/DomainLimiter.cpp.o
[ 41%] Building CXX object CMakeFiles/yade.dir/pkg/dem/GlobalStiffnessTimeStepper.cpp.o
[ 42%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Ip2_ElastMat.cpp.o
[ 42%] Building CXX object CMakeFiles/yade.dir/pkg/dem/VTKRecorder.cpp.o
In file included from /usr/include/c++/4.8/backward/strstream:51:0,
from /usr/include/vtk-5.8/vtkIOStream.h:112,
from /usr/include/vtk-5.8/vtkSystemIncludes.h:40,
from /usr/include/vtk-5.8/vtkIndent.h:24,
from /usr/include/vtk-5.8/vtkObjectBase.h:43,
from /usr/include/vtk-5.8/vtkObject.h:41,
from /usr/include/vtk-5.8/vtkCell.h:40,
from /usr/include/vtk-5.8/vtkQuad.h:25,
from /home/ehsan/yade-daily/trunk/pkg/dem/VTKRecorder.hpp:3,
from /home/ehsan/yade-daily/trunk/pkg/dem/VTKRecorder.cpp:3:
/usr/include/c++/4.8/backward/backward_warning.h:32:2: warning: #warning This file includes at least one deprecated or antiquated header which may be removed without further notice at a future date. Please use a non-deprecated interface with equivalent functionality instead. For a listing of replacement headers and interfaces, consult the file backward_warning.h. To disable this warning use -Wno-deprecated. [-Wcpp]
#warning \
^
[ 43%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Ip2_2xNormalInelasticMat_NormalInelasticityPhys.cpp.o
[ 44%] Building CXX object CMakeFiles/yade.dir/pkg/dem/UniaxialStrainer.cpp.o
[ 44%] Building CXX object CMakeFiles/yade.dir/pkg/dem/JointedCohesiveFrictionalPM.cpp.o
[ 45%] Building CXX object CMakeFiles/yade.dir/pkg/dem/CohesiveTriaxialTest.cpp.o
[ 45%] Building CXX object CMakeFiles/yade.dir/pkg/dem/FlowEngine.cpp.o
In file included from /home/ehsan/yade-daily/trunk/pkg/dem/FlowEngine.cpp:28:0:
/home/ehsan/yade-daily/trunk/pkg/dem/FlowEngine.hpp: In member function ‘void FlowEngine::cholmodStats()’:
/home/ehsan/yade-daily/trunk/pkg/dem/FlowEngine.hpp:199:91: warning: deprecated conversion from string constant to ‘char*’ [-Wwrite-strings]
cerr << cholmod_print_common("PFV Cholmod factorization",&(solver->eSolver.cholmod()))<<endl;
^
[ 46%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Polyhedra_support.cpp.o
[ 47%] Building CXX object CMakeFiles/yade.dir/pkg/dem/FlatGridCollider.cpp.o
[ 47%] Building CXX object CMakeFiles/yade.dir/pkg/dem/MicroMacroAnalyser.cpp.o
[ 48%] Building CXX object CMakeFiles/yade.dir/pkg/dem/TriaxialStressController.cpp.o
[ 48%] Building CXX object CMakeFiles/yade.dir/pkg/dem/SpherePack.cpp.o
[ 49%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Shop_01.cpp.o
[ 49%] Building CXX object CMakeFiles/yade.dir/pkg/dem/BubbleMat.cpp.o
[ 50%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Shop_02.cpp.o
[ 51%] Building CXX object CMakeFiles/yade.dir/pkg/dem/CohFrictMat.cpp.o
[ 51%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Polyhedra_Ig2.cpp.o
[ 52%] Building CXX object CMakeFiles/yade.dir/pkg/dem/PeriIsoCompressor.cpp.o
[ 52%] Building CXX object CMakeFiles/yade.dir/pkg/dem/UnbalancedForceCallbacks.cpp.o
[ 53%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Disp2DPropLoadEngine.cpp.o
[ 53%] Building CXX object CMakeFiles/yade.dir/pkg/dem/STLImporter.cpp.o
In file included from /home/ehsan/yade-daily/trunk/pkg/dem/STLImporter.cpp:10:0:
/home/ehsan/yade-daily/build/yade/lib/import/STLReader.hpp: In member function ‘bool STLReader::open_ascii(const char*, OutV, OutE, OutF, OutN) [with OutV = std::back_insert_iterator<std::vector<double> >; OutE = std::back_insert_iterator<std::vector<int> >; OutF = std::back_insert_iterator<std::vector<int> >; OutN = std::back_insert_iterator<std::vector<double> >]’:
/home/ehsan/yade-daily/build/yade/lib/import/STLReader.hpp:120:2: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result]
fscanf(fp, "%*s %*s %f %f %f\n", &n[0], &n[1], &n[2]);
^
/home/ehsan/yade-daily/build/yade/lib/import/STLReader.hpp:121:2: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result]
fscanf(fp, "%*s %*s");
^
/home/ehsan/yade-daily/build/yade/lib/import/STLReader.hpp:122:2: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result]
fscanf(fp, "%*s %f %f %f\n", &v[0][0], &v[0][1], &v[0][2]);
^
/home/ehsan/yade-daily/build/yade/lib/import/STLReader.hpp:123:2: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result]
fscanf(fp, "%*s %f %f %f\n", &v[1][0], &v[1][1], &v[1][2]);
^
/home/ehsan/yade-daily/build/yade/lib/import/STLReader.hpp:124:2: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result]
fscanf(fp, "%*s %f %f %f\n", &v[2][0], &v[2][1], &v[2][2]);
^
/home/ehsan/yade-daily/build/yade/lib/import/STLReader.hpp:125:2: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result]
fscanf(fp, "%*s"); // end loop
^
/home/ehsan/yade-daily/build/yade/lib/import/STLReader.hpp:126:2: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’, declared with attribute warn_unused_result [-Wunused-result]
fscanf(fp, "%*s"); // end facet
^
[ 54%] Building CXX object CMakeFiles/yade.dir/pkg/dem/SpheresFactory.cpp.o
[ 55%] Building CXX object CMakeFiles/yade.dir/pkg/dem/ViscoelasticPM.cpp.o
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[ 57%] Building CXX object CMakeFiles/yade.dir/pkg/dem/ElasticContactLaw.cpp.o
[ 58%] Building CXX object CMakeFiles/yade.dir/pkg/dem/CapillaryTriaxialTest.cpp.o
[ 58%] Building CXX object CMakeFiles/yade.dir/pkg/dem/NormalInelasticityPhys.cpp.o
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[ 59%] Building CXX object CMakeFiles/yade.dir/pkg/dem/WirePM.cpp.o
[ 60%] Building CXX object CMakeFiles/yade.dir/pkg/dem/KinemCNSEngine.cpp.o
[ 60%] Building CXX object CMakeFiles/yade.dir/pkg/dem/Ip2_2xInelastCohFrictMat_InelastCohFrictPhys.cpp.o
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[ 67%] Building CXX object CMakeFiles/yade.dir/pkg/common/Gl1_Box.cpp.o
[ 67%] Building CXX object CMakeFiles/yade.dir/pkg/common/InteractionLoop.cpp.o
[ 68%] Building CXX object CMakeFiles/yade.dir/pkg/common/Facet.cpp.o
[ 68%] Building CXX object CMakeFiles/yade.dir/pkg/common/Dispatching.cpp.o
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[ 71%] Building CXX object CMakeFiles/yade.dir/pkg/common/Bo1_Box_Aabb.cpp.o
[ 72%] Building CXX object CMakeFiles/yade.dir/pkg/common/Bo1_Sphere_Aabb.cpp.o
[ 73%] Building CXX object CMakeFiles/yade.dir/pkg/common/Sphere.cpp.o
[ 73%] Building CXX object CMakeFiles/yade.dir/pkg/common/Gl1_Sphere.cpp.o
[ 74%] Building CXX object CMakeFiles/yade.dir/pkg/common/GLDrawFunctors.cpp.o
[ 74%] Building CXX object CMakeFiles/yade.dir/pkg/common/Wall.cpp.o
[ 75%] Building CXX object CMakeFiles/yade.dir/pkg/common/Collider.cpp.o
[ 75%] Building CXX object CMakeFiles/yade.dir/pkg/common/BoundaryController.cpp.o
[ 76%] Building CXX object CMakeFiles/yade.dir/pkg/common/Cylinder.cpp.o
[ 77%] Building CXX object CMakeFiles/yade.dir/pkg/common/Callbacks.cpp.o
[ 77%] Building CXX object CMakeFiles/yade.dir/pkg/common/GravityEngines.cpp.o
[ 78%] Building CXX object CMakeFiles/yade.dir/pkg/common/ForceEngine.cpp.o
[ 78%] Building CXX object CMakeFiles/yade.dir/pkg/common/PeriodicEngines.cpp.o
[ 79%] Building CXX object CMakeFiles/yade.dir/pkg/common/Gl1_Facet.cpp.o
[ 79%] Building CXX object CMakeFiles/yade.dir/pkg/common/Box.cpp.o
[ 80%] Building CXX object CMakeFiles/yade.dir/pkg/common/InsertionSortCollider.cpp.o
[ 81%] Building CXX object CMakeFiles/yade.dir/pkg/common/Grid.cpp.o
[ 81%] Building CXX object CMakeFiles/yade.dir/pkg/common/ForceResetter.cpp.o
[ 82%] Building CXX object CMakeFiles/yade.dir/pkg/common/ParallelEngine.cpp.o
[ 82%] Building CXX object CMakeFiles/yade.dir/pkg/common/Aabb.cpp.o
[ 83%] Building CXX object CMakeFiles/yade.dir/pkg/common/Grid_GUI.cpp.o
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[ 85%] Building CXX object CMakeFiles/yade.dir/pkg/common/OpenGLRenderer.cpp.o
[ 85%] Building CXX object CMakeFiles/yade.dir/pkg/common/NormShearPhys.cpp.o
[ 86%] Building CXX object CMakeFiles/yade.dir/pkg/common/SpatialQuickSortCollider.cpp.o
[ 86%] Building CXX object CMakeFiles/yade.dir/lib/base/Math.cpp.o
[ 87%] Building CXX object CMakeFiles/yade.dir/lib/factory/ClassFactory.cpp.o
[ 88%] Building CXX object CMakeFiles/yade.dir/lib/factory/DynLibManager.cpp.o
[ 88%] Building CXX object CMakeFiles/yade.dir/lib/multimethods/Indexable.cpp.o
[ 89%] Building CXX object CMakeFiles/yade.dir/lib/serialization/Serializable.cpp.o
[ 89%] Building CXX object CMakeFiles/yade.dir/lib/pyutil/gil.cpp.o
[ 90%] Building CXX object CMakeFiles/yade.dir/core/main/pyboot.cpp.o
[ 90%] Building CXX object CMakeFiles/yade.dir/lib/opengl/GLUtils.cpp.o
[ 91%] Building CXX object CMakeFiles/yade.dir/lib/triangulation/TriaxialState.cpp.o
[ 92%] Building CXX object CMakeFiles/yade.dir/lib/triangulation/basicVTKwritter.cpp.o
[ 92%] Building CXX object CMakeFiles/yade.dir/lib/triangulation/KinematicLocalisationAnalyser.cpp.o
[ 93%] Building CXX object CMakeFiles/yade.dir/lib/triangulation/FlowBoundingSphere.cpp.o
[ 93%] Building CXX object CMakeFiles/yade.dir/lib/triangulation/PeriodicFlow.cpp.o
[ 94%] Building CXX object CMakeFiles/yade.dir/lib/triangulation/Tenseur3.cpp.o
[ 95%] Building CXX object CMakeFiles/yade.dir/lib/triangulation/Timer.cpp.o
Linking CXX shared library lib/x86_64-linux-gnu/libyade.so
[ 95%] Built target yade
Scanning dependencies of target boot
[ 95%] Building CXX object CMakeFiles/boot.dir/core/main/pyboot.cpp.o
Linking CXX shared library lib/x86_64-linux-gnu/boot.so
[ 95%] Built target boot
Scanning dependencies of target WeightedAverage2d
[ 95%] Building CXX object py/CMakeFiles/WeightedAverage2d.dir/WeightedAverage2d.cpp.o
Linking CXX shared library lib/x86_64-linux-gnu/WeightedAverage2d.so
[ 95%] Built target WeightedAverage2d
Scanning dependencies of target _customConverters
[ 96%] Building CXX object py/CMakeFiles/_customConverters.dir/wrapper/customConverters.cpp.o
Linking CXX shared library lib/x86_64-linux-gnu/_customConverters.so
[ 96%] Built target _customConverters
Scanning dependencies of target _packObb
[ 96%] Building CXX object py/CMakeFiles/_packObb.dir/pack/_packObb.cpp.o
Linking CXX shared library lib/x86_64-linux-gnu/_packObb.so
[ 96%] Built target _packObb
Scanning dependencies of target _packPredicates
[ 97%] Building CXX object py/CMakeFiles/_packPredicates.dir/pack/_packPredicates.cpp.o
Linking CXX shared library lib/x86_64-linux-gnu/_packPredicates.so
[ 97%] Built target _packPredicates
Scanning dependencies of target _packSpheres
[ 98%] Building CXX object py/CMakeFiles/_packSpheres.dir/pack/_packSpheres.cpp.o
Linking CXX shared library lib/x86_64-linux-gnu/_packSpheres.so
[ 98%] Built target _packSpheres
Scanning dependencies of target _polyhedra_utils
[ 98%] Building CXX object py/CMakeFiles/_polyhedra_utils.dir/_polyhedra_utils.cpp.o
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1728:0,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17,
from /home/ehsan/yade-daily/trunk/py/_polyhedra_utils.cpp:17:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_deprecated_api.h:11:2: warning: #warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION"
^
Linking CXX shared library lib/x86_64-linux-gnu/_polyhedra_utils.so
[ 98%] Built target _polyhedra_utils
Scanning dependencies of target _utils
[ 99%] Building CXX object py/CMakeFiles/_utils.dir/_utils.cpp.o
In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1728:0,
from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:17,
from /home/ehsan/yade-daily/trunk/py/_utils.cpp:18:
/usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_deprecated_api.h:11:2: warning: #warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
#warning "Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION"
^
Linking CXX shared library lib/x86_64-linux-gnu/_utils.so
[ 99%] Built target _utils
Scanning dependencies of target wrapper
[100%] Building CXX object py/CMakeFiles/wrapper.dir/wrapper/yadeWrapper.cpp.o
Linking CXX shared library lib/x86_64-linux-gnu/wrapper.so
[100%] Built target wrapper
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Since I am new to linux and yade, I don't understand some warnings. but it seems to be some issues with that.
What can I do to solve my problem? any ideas?
Ehsan
You received this question notification because you are a member of
yade-users, which is an answer contact for Yade.
