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Message #16567
Re: [Question #662276]: yade --check
Question #662276 on Yade changed:
https://answers.launchpad.net/yade/+question/662276
Status: Answered => Open
azim is still having a problem:
Hi Robert,
i have tried thread[1] over and over in last 3 days. and I got the same
result.I followed it in a few minutes ago and this is the result after
installing:
INSTALLING YADEDAILY
sudo bash -c 'echo "deb http://www.yade-dem.org/packages/ xenial/" >> /etc/apt/sources.list'
[sudo] password for azim:
azim@azim-X450LCP:~$ wget -O - http://www.yade-dem.org/packages/yadedev_pub.gpg | sudo apt-key add -
--2018-01-05 07:45:30-- http://www.yade-dem.org/packages/yadedev_pub.gpg
Resolving www.yade-dem.org (www.yade-dem.org)... 194.254.65.201
Connecting to www.yade-dem.org (www.yade-dem.org)|194.254.65.201|:80... connected.
HTTP request sent, awaiting response... 200 OK
Length: 3143 (3.1K)
Saving to: ‘STDOUT’
- 100%[===================>] 3.07K --.-KB/s in
0s
2018-01-05 07:45:34 (54.2 MB/s) - written to stdout [3143/3143]
OK
azim@azim-X450LCP:~$ sudo apt-get update
Get:1 http://ppa.launchpad.net/atareao/telegram/ubuntu xenial InRelease [17.5 kB]
Get:2 http://www.yade-dem.org/packages xenial/ InRelease [2,460 B]
Get:3 http://www.yade-dem.org/packages xenial/ Packages [2,187 B]
Ign:1 http://ppa.launchpad.net/atareao/telegram/ubuntu xenial InRelease
Hit:4 http://ppa.launchpad.net/deadsnakes/ppa/ubuntu xenial InRelease
Hit:5 http://ppa.launchpad.net/jonathonf/python-3.6/ubuntu xenial InRelease
Hit:6 https://repo.skype.com/deb stable InRelease
Hit:7 http://archive.ubuntu.com/ubuntu xenial InRelease
Hit:8 http://ppa.launchpad.net/kubuntu-ppa/backports/ubuntu xenial InRelease
Hit:9 http://archive.ubuntu.com/ubuntu xenial-updates InRelease
Get:10 http://ppa.launchpad.net/nilarimogard/webupd8/ubuntu xenial InRelease [17.5 kB]
Hit:11 http://archive.ubuntu.com/ubuntu xenial-backports InRelease
Hit:12 http://archive.ubuntu.com/ubuntu xenial-security InRelease
Ign:10 http://ppa.launchpad.net/nilarimogard/webupd8/ubuntu xenial InRelease
Hit:13 http://ppa.launchpad.net/noobslab/apps/ubuntu xenial InRelease
Hit:14 http://ppa.launchpad.net/stebbins/handbrake-releases/ubuntu xenial InRelease
Ign:15 http://ppa.launchpad.net/yade-users/external/ubuntu xenial InRelease
Ign:16 http://ppa.launchpad.net/yade-users/external/ubuntu xenial Release
Ign:17 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main amd64 Packages
Ign:18 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main i386 Packages
Ign:19 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main all Packages
Ign:20 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main Translation-en_US
Ign:21 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main Translation-en
Ign:22 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main amd64 DEP-11 Metadata
Ign:23 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main DEP-11 64x64 Icons
Ign:17 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main amd64 Packages
Ign:18 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main i386 Packages
Ign:19 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main all Packages
Ign:20 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main Translation-en_US
Ign:21 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main Translation-en
Ign:22 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main amd64 DEP-11 Metadata
Ign:23 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main DEP-11 64x64 Icons
Ign:17 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main amd64 Packages
Ign:18 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main i386 Packages
Ign:19 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main all Packages
Ign:20 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main Translation-en_US
Ign:21 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main Translation-en
Ign:22 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main amd64 DEP-11 Metadata
Ign:23 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main DEP-11 64x64 Icons
Ign:17 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main amd64 Packages
Ign:18 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main i386 Packages
Ign:19 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main all Packages
Ign:20 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main Translation-en_US
Ign:21 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main Translation-en
Ign:22 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main amd64 DEP-11 Metadata
Ign:23 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main DEP-11 64x64 Icons
Ign:17 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main amd64 Packages
Ign:18 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main i386 Packages
Ign:19 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main all Packages
Ign:20 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main Translation-en_US
Ign:21 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main Translation-en
Ign:22 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main amd64 DEP-11 Metadata
Ign:23 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main DEP-11 64x64 Icons
Err:17 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main amd64 Packages
404 Not Found
Ign:18 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main i386 Packages
Ign:19 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main all Packages
Ign:20 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main Translation-en_US
Ign:21 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main Translation-en
Ign:22 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main amd64 DEP-11 Metadata
Ign:23 http://ppa.launchpad.net/yade-users/external/ubuntu xenial/main DEP-11 64x64 Icons
Fetched 39.7 kB in 1min 21s (486 B/s)
Reading package lists... Done
W: Target Packages (main/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list.d/skype-stable.list:1 and /etc/apt/sources.list.d/skypeforlinux.list:1
W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list.d/skype-stable.list:1 and /etc/apt/sources.list.d/skypeforlinux.list:1
W: Target Translations (main/i18n/Translation-en_US) is configured multiple times in /etc/apt/sources.list.d/skype-stable.list:1 and /etc/apt/sources.list.d/skypeforlinux.list:1
W: Target Translations (main/i18n/Translation-en) is configured multiple times in /etc/apt/sources.list.d/skype-stable.list:1 and /etc/apt/sources.list.d/skypeforlinux.list:1
W: Target DEP-11 (main/dep11/Components-amd64.yml) is configured multiple times in /etc/apt/sources.list.d/skype-stable.list:1 and /etc/apt/sources.list.d/skypeforlinux.list:1
W: Target DEP-11-icons (main/dep11/icons-64x64.tar) is configured multiple times in /etc/apt/sources.list.d/skype-stable.list:1 and /etc/apt/sources.list.d/skypeforlinux.list:1
W: GPG error: http://ppa.launchpad.net/atareao/telegram/ubuntu xenial InRelease: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 6A9653F936FD5529
W: The repository 'http://ppa.launchpad.net/atareao/telegram/ubuntu xenial InRelease' is not signed.
N: Data from such a repository can't be authenticated and is therefore potentially dangerous to use.
N: See apt-secure(8) manpage for repository creation and user configuration details.
W: GPG error: http://ppa.launchpad.net/nilarimogard/webupd8/ubuntu xenial InRelease: The following signatures couldn't be verified because the public key is not available: NO_PUBKEY 531EE72F4C9D234C
W: The repository 'http://ppa.launchpad.net/nilarimogard/webupd8/ubuntu xenial InRelease' is not signed.
N: Data from such a repository can't be authenticated and is therefore potentially dangerous to use.
N: See apt-secure(8) manpage for repository creation and user configuration details.
W: The repository 'http://ppa.launchpad.net/yade-users/external/ubuntu xenial Release' does not have a Release file.
N: Data from such a repository can't be authenticated and is therefore potentially dangerous to use.
N: See apt-secure(8) manpage for repository creation and user configuration details.
E: Failed to fetch http://ppa.launchpad.net/yade-users/external/ubuntu/dists/xenial/main/binary-amd64/Packages 404 Not Found
E: Some index files failed to download. They have been ignored, or old ones used instead.
W: Target Packages (main/binary-amd64/Packages) is configured multiple times in /etc/apt/sources.list.d/skype-stable.list:1 and /etc/apt/sources.list.d/skypeforlinux.list:1
W: Target Packages (main/binary-all/Packages) is configured multiple times in /etc/apt/sources.list.d/skype-stable.list:1 and /etc/apt/sources.list.d/skypeforlinux.list:1
W: Target Translations (main/i18n/Translation-en_US) is configured multiple times in /etc/apt/sources.list.d/skype-stable.list:1 and /etc/apt/sources.list.d/skypeforlinux.list:1
W: Target Translations (main/i18n/Translation-en) is configured multiple times in /etc/apt/sources.list.d/skype-stable.list:1 and /etc/apt/sources.list.d/skypeforlinux.list:1
W: Target DEP-11 (main/dep11/Components-amd64.yml) is configured multiple times in /etc/apt/sources.list.d/skype-stable.list:1 and /etc/apt/sources.list.d/skypeforlinux.list:1
W: Target DEP-11-icons (main/dep11/icons-64x64.tar) is configured multiple times in /etc/apt/sources.list.d/skype-stable.list:1 and /etc/apt/sources.list.d/skypeforlinux.list:1
azim@azim-X450LCP:~$ sudo apt-get install yadedaily
Reading package lists... Done
Building dependency tree
Reading state information... Done
The following package was automatically installed and is no longer required:
libllvm4.0
Use 'sudo apt autoremove' to remove it.
The following additional packages will be installed:
libyadedaily python-yadedaily
The following NEW packages will be installed:
libyadedaily python-yadedaily yadedaily
0 upgraded, 3 newly installed, 0 to remove and 1 not upgraded.
Need to get 12.9 MB of archives.
After this operation, 87.4 MB of additional disk space will be used.
Do you want to continue? [Y/n] y
Get:1 http://www.yade-dem.org/packages xenial/ libyadedaily 2017.01a-187d6cfc7f~xenial-1 [9,207 kB]
Get:2 http://www.yade-dem.org/packages xenial/ python-yadedaily 2017.01a-187d6cfc7f~xenial-1 [2,104 kB]
Get:3 http://www.yade-dem.org/packages xenial/ yadedaily 2017.01a-187d6cfc7f~xenial-1 [1,626 kB]
Fetched 12.9 MB in 3min 30s (61.5 kB/s)
Selecting previously unselected package libyadedaily:amd64.
(Reading database ... 276193 files and directories currently installed.)
Preparing to unpack .../libyadedaily_2017.01a-187d6cfc7f~xenial-1_amd64.deb ...
Unpacking libyadedaily:amd64 (2017.01a-187d6cfc7f~xenial-1) ...
Selecting previously unselected package python-yadedaily.
Preparing to unpack .../python-yadedaily_2017.01a-187d6cfc7f~xenial-1_amd64.deb ...
Unpacking python-yadedaily (2017.01a-187d6cfc7f~xenial-1) ...
Selecting previously unselected package yadedaily.
Preparing to unpack .../yadedaily_2017.01a-187d6cfc7f~xenial-1_amd64.deb ...
Unpacking yadedaily (2017.01a-187d6cfc7f~xenial-1) ...
Processing triggers for man-db (2.7.5-1) ...
Processing triggers for desktop-file-utils (0.22-1ubuntu5.1) ...
Processing triggers for bamfdaemon (0.5.3~bzr0+16.04.20160824-0ubuntu1) ...
Rebuilding /usr/share/applications/bamf-2.index...
Processing triggers for gnome-menus (3.13.3-6ubuntu3.1) ...
Processing triggers for mime-support (3.59ubuntu1) ...
Setting up libyadedaily:amd64 (2017.01a-187d6cfc7f~xenial-1) ...
Setting up python-yadedaily (2017.01a-187d6cfc7f~xenial-1) ...
Setting up yadedaily (2017.01a-187d6cfc7f~xenial-1) ...
#########################################
YADE --CHECK
yadedaily --check
Welcome to Yade 2017.01a-187d6cfc7f~xenial
###################################
running: checkLiquidMigration.py
This checkLiquidMigration.py cannot be executed because LIQMIGRATION is disabled
Status: success
___________________________________
###################################
Skipping checkList.py, because it is in SkipScripts
###################################
running: DEM-PFV-check.py
DEM-PFV: unbalanced Qin vs. Qout ( -0.00279199571618 vs. 0.0 )
DEM-PFV: difference in permeability: 27.9199571618 vs. target 0.040399916554
The difference is more, than the critical tolerance!
DEM-PFV: difference in final pressure: 0.0 vs. target 628.314160434
The difference is more, than the critical tolerance!
DEM-PFV: difference in final deformation -0.00430506304298 vs. target -0.00258113045083
The difference is more, than the critical tolerance!
DEM-PFV: Metis is not used during cholmod's reordering although explicitly enabled, something wrong with libraries
Status: FAILURE!!!
___________________________________
###################################
running: checkWeight.py
Precalculated weight 756.093387
Obtained weight 756.093387
Status: success
___________________________________
###################################
running: checkCapillaryModels.py
Status: success
___________________________________
###################################
running: checkViscElEng.py
Precalculated en value 0.736356797441
Obtained en value 0.736356797441
Status: success
___________________________________
###################################
running: checkPolyhedraCrush.py
Checkpoint: force values and number of bodies are OK! Iteration 250
Checkpoint: force values and number of bodies are OK! Iteration 300
Checkpoint: force values and number of bodies are OK! Iteration 310
Checkpoint: force values and number of bodies are OK! Iteration 330
Status: success
___________________________________
###################################
running: checkWirePM.py
Status: success
___________________________________
###################################
running: checkTestDummy.py
checkTest mechanism
Status: success
___________________________________
###################################
running: checkGravity.py
Status: success
___________________________________
###################################
running: checkClumpHopper.py
Iter 10000: Total number of generated spheres 1448, removed particles 0, current particles 1448, kinEnergy 13755.3
Iter 20000: Total number of generated spheres 2896, removed particles 157, current particles 2739, kinEnergy 32441.5
Iter 30000: Total number of generated spheres 3620, removed particles 812, current particles 2808, kinEnergy 25812.6
Iter 40000: Total number of generated spheres 5068, removed particles 1630, current particles 3438, kinEnergy 23692.9
Iter 50000: Total number of generated spheres 5068, removed particles 2111, current particles 2957, kinEnergy 17471
Status: success
___________________________________
###################################
running: checkViscElPM2.py
Status: success
___________________________________
###################################
running: checkViscElPM.py
Status: success
___________________________________
###################################
running: checkTestTriax.py
File ./checkTest.yade moved into /tmp/tmpob1NXn/ directory
File ./_Unloaded_380_3.spheres moved into /tmp/tmpob1NXn/ directory
File ./_Unloaded_380_3.xml moved into /tmp/tmpob1NXn/ directory
File ./WallStresses moved into /tmp/tmpob1NXn/ directory
Status: success
___________________________________
###################################
running: checkSaveLoadClumps.py
Status: success
___________________________________
1 tests are failed
---------------------------------------------------------------------------------------------------------------------
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