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svn1376 crash

To: Yade Development Group <yade-dev@xxxxxxxxxxxxxxxx>
From: sega <dorofeenko@xxxxxxxxx>
Date: Fri, 6 Jun 2008 12:57:57 +0400
Delivered-to: janek_listy@xxxxx (janek_listy)
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In-reply-to: <20080605211551.046134f6@absurd>
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sega@sega:~/YADE/data> yade-trunk STLImporterTest.py
Constructing ClassFactory  (if multiple times - check '-rdynamic' flag!).
Constructing SerializableSingleton  (if multiple times - check '-rdynamic' flag!).
WARNING: cannot open file used for capillary law, in TriaxalTestWater
Running script STLImporterTest.py
__   __    ____          ____                      _
\ \ / /_ _|  _ \  ___   / ___|___  _ __  ___  ___ | | ___
 \ V / _` | | | |/ _ \ | |   / _ \| '_ \/ __|/ _ \| |/ _ \
  | | (_| | |_| |  __/ | |__| (_) | | | \__ \ (_) | |  __/
  |_|\__,_|____/ \___|  \____\___/|_| |_|___/\___/|_|\___|


In [1]: Omega::instance().getSimulationFileName()=
In [1]: SIGSEGV/SIGABRT handler called; gdb batch file is `/home/sega/.yade-trunk/gdb_crash_batch-pid20763'
GNU gdb 6.5
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There is absolutely no warranty for GDB.  Type "show warranty" for details.
This GDB was configured as "x86_64-suse-linux".
Using host libthread_db library "/lib64/libthread_db.so.1".
[Thread debugging using libthread_db enabled]
[New Thread 47835561507888 (LWP 20763)]
[New Thread 1091017024 (LWP 20930)]
[New Thread 1082149184 (LWP 20809)]
0x00002b81915b9302 in __select_nocancel () from /lib64/libc.so.6
No symbol "info" in current context.

Thread 3 (Thread 1082149184 (LWP 20809)):
#0  0x00002b81915b9302 in __select_nocancel () from /lib64/libc.so.6
#1  0x00002aaad0b124c5 in initreadline () from /usr/lib64/python2.5/lib-dynload/readline.so
#2  0x00002b818dcefb4f in PyOS_Readline () from /usr/lib64/libpython2.5.so.1.0
#3  0x00002b818dd5bc74 in _PyBuiltin_Init () from /usr/lib64/libpython2.5.so.1.0
#4  0x00002b818dd6556a in PyEval_EvalFrameEx () from /usr/lib64/libpython2.5.so.1.0
#5  0x00002b818dd665ac in PyEval_EvalCodeEx () from /usr/lib64/libpython2.5.so.1.0
#6  0x00002b818dd64cd4 in PyEval_EvalFrameEx () from /usr/lib64/libpython2.5.so.1.0
#7  0x00002b818dd665ac in PyEval_EvalCodeEx () from /usr/lib64/libpython2.5.so.1.0
#8  0x00002b818dd64cd4 in PyEval_EvalFrameEx () from /usr/lib64/libpython2.5.so.1.0
#9  0x00002b818dd665ac in PyEval_EvalCodeEx () from /usr/lib64/libpython2.5.so.1.0
#10 0x00002b818dd64cd4 in PyEval_EvalFrameEx () from /usr/lib64/libpython2.5.so.1.0
#11 0x00002b818dd665ac in PyEval_EvalCodeEx () from /usr/lib64/libpython2.5.so.1.0
#12 0x00002b818dd0ec48 in PyClassMethod_New () from /usr/lib64/libpython2.5.so.1.0
#13 0x00002b818dcf1e13 in PyObject_Call () from /usr/lib64/libpython2.5.so.1.0
#14 0x00002b818dcf8ecd in PyClass_IsSubclass () from /usr/lib64/libpython2.5.so.1.0
#15 0x00002b818dcf1e13 in PyObject_Call () from /usr/lib64/libpython2.5.so.1.0
#16 0x00002b818dcf993b in _PyInstance_Lookup () from /usr/lib64/libpython2.5.so.1.0
#17 0x00002b818dcf1e13 in PyObject_Call () from /usr/lib64/libpython2.5.so.1.0
#18 0x00002b818dd62463 in PyEval_EvalFrameEx () from /usr/lib64/libpython2.5.so.1.0
#19 0x00002b818dd665ac in PyEval_EvalCodeEx () from /usr/lib64/libpython2.5.so.1.0
#20 0x00002b818dd665f2 in PyEval_EvalCode () from /usr/lib64/libpython2.5.so.1.0
#21 0x00002b818dd7f022 in Py_CompileString () from /usr/lib64/libpython2.5.so.1.0
#22 0x00002b818dd7f0f6 in PyRun_FileExFlags () from /usr/lib64/libpython2.5.so.1.0
#23 0x00002b818dd805b8 in PyRun_SimpleFileExFlags () from /usr/lib64/libpython2.5.so.1.0
#24 0x00002aaab50667d5 in PythonUI::execScript (script=@0x40803fd0) at gui/py/PythonUI.cpp:42
#25 0x00002aaab50676e8 in PythonUI::pythonSession () at gui/py/PythonUI.cpp:92
#26 0x00002aaab494f841 in boost::detail::function::void_function_invoker0<void (*)(), void>::invoke (function_ptr=@0x408040a8) at /usr/local/inc
lude/boost/function/function_template.hpp:114
#27 0x00002b818e68e54e in boost::function0<void, std::allocator<boost::function_base> >::operator() () from /usr/local/lib64/libboost_thread-gcc
41-mt-1_34_1.so.1.34.1
#28 0x00002b818e68e202 in boost::thread_group::add_thread () from /usr/local/lib64/libboost_thread-gcc41-mt-1_34_1.so.1.34.1
#29 0x00002b818e01309e in start_thread () from /lib64/libpthread.so.0
#30 0x00002b81915bf4cd in clone () from /lib64/libc.so.6
#31 0x0000000000000000 in ?? ()

Thread 2 (Thread 1091017024 (LWP 20930)):
#0  0x00002b8191590e1f in waitpid () from /lib64/libc.so.6
#1  0x00002b8191539491 in do_system () from /lib64/libc.so.6
#2  0x00002b8191539817 in system () from /lib64/libc.so.6
#3  0x000000000056f82b in sigHandler (sig=11) at core/yade.cpp:58
#4  <signal handler called>
#5  0x00002b819030cdce in Wm3::Vector3<double>::Dot (this=0x0, rkV=@0x41078a00) at /home/sega/build/yade/build-trunk/include/yade-trunk/yade/lib
-miniWm3/Wm3Vector3.inl:293
#6  0x00002aaac419f3f9 in InteractingFacet2InteractingSphere4SpheresContactGeometry::go (this=0xa49210, cm1=@0x41078c80, cm2=@0x41078c90, se31=@           0xb4d1e0, se32=@0xbc2650, c=@0x41078d80) at pkg/dem/Engine/EngineUnit/InteractingFacet2InteractingSphere4SpheresContactGeometry.cpp:49
#7  0x00002aaac419f182 in InteractingFacet2InteractingSphere4SpheresContactGeometry::goReverse (this=0xa49210, cm1=@0x41078c90, cm2=@0x41078c80,            se31=@0xbc2650, se32=@0xb4d1e0, c=@0x41078d80) at pkg/dem/Engine/EngineUnit/InteractingFacet2InteractingSphere4SpheresContactGeometry.cpp:87
#8  0x00002aaaadc2745f in DynLibDispatcher<Loki::Typelist<InteractingGeometry, Loki::Typelist<InteractingGeometry, Loki::NullType> >, Interactio           nGeometryEngineUnit, bool, Loki::Typelist<boost::shared_ptr<InteractingGeometry> const&, Loki::Typelist<boost::shared_ptr<InteractingGeometry> c           onst&, Loki::Typelist<Se3<double> const&, Loki::Typelist<Se3<double> const&, Loki::Typelist<boost::shared_ptr<Interaction> const&, Loki::NullTyp           e> > > > >, false>::InvocationTraits<false, InteractingGeometry, InteractingGeometry, Se3<double> const&, Se3<double> const&, boost::shared_ptr<           Interaction> const&, Loki::EmptyType, Loki::EmptyType, Loki::EmptyType, Loki::EmptyType, Loki::EmptyType, Loki::EmptyType, Loki::EmptyType, Loki           ::EmptyType, Loki::EmptyType, Loki::EmptyType>::doDispatch (ex=@0xa472e0, base1=@0x41078c90, base2=@0x41078c80, p3=@0xbc2650, p4=@0xb4d1e0, p5=@           0x41078d80) at /home/sega/build/yade/build-trunk/include/yad
 e-trunk/yade/lib-multimethods/DynLibDispatcher.hpp:678
#9  0x00002aaaadc2a8c6 in DynLibDispatcher<Loki::Typelist<InteractingGeometry, Loki::Typelist<InteractingGeometry, Loki::NullType> >, Interactio           nGeometryEngineUnit, bool, Loki::Typelist<boost::shared_ptr<InteractingGeometry> const&, Loki::Typelist<boost::shared_ptr<InteractingGeometry> c           onst&, Loki::Typelist<Se3<double> const&, Loki::Typelist<Se3<double> const&, Loki::Typelist<boost::shared_ptr<Interaction> const&, Loki::NullTyp           e> > > > >, false>::operator() (this=0xa49280, base1=@0xbace48, base2=@0xb4bc48, p3=@0xbc2650, p4=@0xb4d1e0, p5=@0x41078d80) at /home/sega/build           /yade/build-trunk/include/yade-trunk/yade/lib-multimethods/DynLibDispatcher.hpp:879
#10 0x00002aaaadc1f64e in InteractionGeometryMetaEngine::action (this=0xa49240, ncb=0x94caf0) at pkg/common/Engine/MetaEngine/InteractionGeometr           yMetaEngine.cpp:50
#11 0x00000000005105a3 in MetaBody::moveToNextTimeStep (this=0x94caf0) at core/MetaBody.cpp:81
#12 0x00000000005664b9 in SimulationFlow::singleAction (this=0x80dd60) at core/SimulationFlow.cpp:17
#13 0x0000000000568344 in ThreadWorker::callSingleAction (this=0x80dd60) at core/ThreadWorker.cpp:71
#14 0x0000000000567a25 in ThreadRunner::call (this=0xa4d9b0) at core/ThreadRunner.cpp:42
#15 0x0000000000567a89 in ThreadRunner::run (this=0xa4d9b0) at core/ThreadRunner.cpp:21
#16 0x0000000000567f9d in boost::_mfi::mf0<void, ThreadRunner>::operator() (this=0x410790a8, p=0xa4d9b0) at /usr/local/include/boost/bind/mem_fn           _template.hpp:49
#17 0x000000000056801e in boost::_bi::list1<boost::_bi::value<ThreadRunner*> >::operator()<boost::_mfi::mf0<void, ThreadRunner>, boost::_bi::lis           t0> (this=0x410790b8, f=@0x410790a8, a=@0x4107900f) at /usr/local/include/boost/bind.hpp:231
#18 0x0000000000568061 in boost::_bi::bind_t<void, boost::_mfi::mf0<void, ThreadRunner>, boost::_bi::list1<boost::_bi::value<ThreadRunner*> > >:           :operator() (this=0x410790a8) at /usr/local/include/boost/bind/bind_template.hpp:20
#19 0x0000000000568086 in boost::detail::function::void_function_obj_invoker0<boost::_bi::bind_t<void, boost::_mfi::mf0<void, ThreadRunner>, boo           st::_bi::list1<boost::_bi::value<ThreadRunner*> > >, void>::invoke (function_obj_ptr=@0x410790a8) at /usr/local/include/boost/function/function_           template.hpp:155
#20 0x00002b818e68e54e in boost::function0<void, std::allocator<boost::function_base> >::operator() () from /usr/local/lib64/libboost_thread-gcc           41-mt-1_34_1.so.1.34.1
#21 0x00002b818e68e202 in boost::thread_group::add_thread () from /usr/local/lib64/libboost_thread-gcc41-mt-1_34_1.so.1.34.1
#22 0x00002b818e01309e in start_thread () from /lib64/libpthread.so.0
#23 0x00002b81915bf4cd in clone () from /lib64/libc.so.6
#24 0x0000000000000000 in ?? ()

Thread 1 (Thread 47835561507888 (LWP 20763)):
#0  0x00002b81915b9302 in __select_nocancel () from /lib64/libc.so.6
#1  0x00002b818ef5424b in QEventLoop::processEvents () from /usr/lib64/libqt-mt.so.3
#2  0x00002b818efb2963 in QEventLoop::enterLoop () from /usr/lib64/libqt-mt.so.3
#3  0x00002b818efb2812 in QEventLoop::exec () from /usr/lib64/libqt-mt.so.3
#4  0x00002aaab494ee3b in QtGUI::run (this=0x8d6b20, argc=2, argv=0x7fff1d010708) at gui/qt3/QtGUI.cpp:72
#5  0x000000000056f2f0 in main (argc=2, argv=0x7fff1d010708) at core/yade.cpp:255
#0  0x00002b81915b9302 in __select_nocancel () from /lib64/libc.so.6
In [1]: Segmentation Fault

ps. Previously it worked...
-- 
Best regards, Sergei D.
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Follow ups

Re: svn1376 crash
From: milauer <eudoxos@xxxxxxxx>, 2008-06-06
svn1376 bug
From: sega, 2008-06-06
References

svn1372 crash
From: sega, 2008-06-03
Re: svn1372 crash
From: milauer <eudoxos@xxxxxxxx>, 2008-06-04
Re: svn1372 crash
From: Janek Kozicki, 2008-06-05